Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe06g1177 | ATGGAGGGACGAGCTGGGGTTGCCGGAAATGGGGTTACGCCGGCGGCCGGATCAGATCCTCCGAGGACCGCTACGGCTACTCCGGCATCGGAAGGGGGTGGTCCGGTGGGTCCTGCGGAGTCCGGGAAGAAGAAGAGGGGGAGGCCGAGGAAGTATGGCCCGGACGGGAAGTTGAATGTGGCGGCGGCGCTGTCACCGAAGCCCATATCGGCGTCCGCACCGGCACCGGCGGCGGTGATTGATTTCTCCGCGGAGAAACGTGGGAAAGTGCGGCCGGCGAGTTCCTTGAGCAAAACCAAATATGAAGGGGAGAATTTAGGTGAATGGGTACCTTGTTCTGTTGGTGCTAATTTCACAGCCCATATCATCACTGTCAACATTGGTGAGGACGTTACGATGAAGGTTCTCTCGTTTTCTCAACAAGGGCCTCGAGCCATTTGCATTCTCTCCGCCAACGGCGTGATTTCGAGCGTCACACTTCGTCAACCCGATTCCTCTGGAGGAACATTAACATATGAGGGTCGGTTTGAGATATTGTCGTTGTCGGGATCGTTCATGCCGAGCGACAGCGCAGGAACGAAGAGCAGAACCGGTGGAATGAGTGTCTCCTTATCGAGTCCAGATGGGCGTGTTGTTGGTGGCGGAGTTGCTGGTTTGTTAATAGCTGCCAGTCCTGTTCAAGTGGTAGTTGGAAGCTTTATATCTGGGAACCAACACGAACAAAAGCCAAAGAAGCCGAAACAGGACGTCGTATTACCGGTTTCTGCTCTTCCGATCTCCGGTGGTGAACCGAAGTCATACACGACGACGACGTCGTTTCGTGCTGAAACTTGGTCACCTTTGGTACCAGATTTGAGAAGTCAGCCAACTGATATCAATGTATCTTTAACCAGTGGTTAA | 900 | 53.89 | MEGRAGVAGNGVTPAAGSDPPRTATATPASEGGGPVGPAESGKKKRGRPRKYGPDGKLNVAAALSPKPISASAPAPAAVIDFSAEKRGKVRPASSLSKTKYEGENLGEWVPCSVGANFTAHIITVNIGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDSAGTKSRTGGMSVSLSSPDGRVVGGGVAGLLIAASPVQVVVGSFISGNQHEQKPKKPKQDVVLPVSALPISGGEPKSYTTTTSFRAETWSPLVPDLRSQPTDINVSLTSG | 299 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 61204959 | 61207929 | - | Hsped.06g11770.1 | Hepe06g1177 | 572552 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe06g1177 | 299 | ProSiteProfiles | PPC domain profile profile. | 115 | 260 | IPR005175 | - | |
Hepe06g1177 | 299 | CDD | DUF296 | 121 | 233 | IPR005175 | - | |
Hepe06g1177 | 299 | FunFam | AT-hook motif nuclear-localized protein 1-like | 120 | 250 | - | - | |
Hepe06g1177 | 299 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 20 | 255 | IPR039605 | GO:0003680(InterPro) | |
Hepe06g1177 | 299 | MobiDBLite | consensus disorder prediction | 1 | 59 | - | - | |
Hepe06g1177 | 299 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 120 | 233 | IPR005175 | - | |
Hepe06g1177 | 299 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 117 | 238 | - | - | |
Hepe06g1177 | 299 | Gene3D | - | 119 | 249 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe06g1177 | Hepe-Chr6:61204959 | Hepe07g0228 | Hepe-Chr7:2171780 | 1.05e-81 | dispersed | |
Hepe06g1177 | Hepe-Chr6:61204959 | Hepe06g1625 | Hepe-Chr6:67129009 | 1.66e-133 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe06g1177 | - | - | - | 0.0 |