Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1222 ATGGGTTCTTGTCATTCCTCTTCTAAAGGGCGGCGGAGCAGCGGCGGCGCTGATTTCGCCGCCACAGCGTCGGCTGAGCCTCCGACGGCTTCTACGACAGAACCCTTTTCTTCTTCTTCATTTTTGAACTCTAAGAGCAGTAGGCCGCGTTGGTGGAAGAAGAATTCGACTAAAACTTTTGGGGTTGGGGTTTGTTCAGAGAAAGTTCATGAATTTGAGGTTCCGGGGAGGATTTGCTCTAATGGGTCATCGAGAGTTGCTTGTTTGTATACGCAGCAGGGGAAAAAAGGGGTTAATCAAGATGCCATGGTTTTGCAGGAGAATTTCAGTTCAAGAAAAGATACGATATTTTGTGGGGTATTTGATGGACATGGTCCTTTCGGACATATGGTTGCGAAAAAAGTTCGTGATACCCTCCCTCTAATCCTATGTACACAATGGACATCTAAATCAGATGAAGATCAAAGCAGCCTCTTTAAGACGAGACATTCCAGAAGTTCGAATTCTGAAGATTCTGTTGCTCTAGACGCCGATGAAGATTTTTACAAGTCATTGGAGGCTGAGGAAAATGAAAAATTCCCCAAGATGTTTCTTCCACTAAAAGTATCTATACTGAAGTCCTTCAAATTAATGGATAAAGAGTTGAAACTACATCCCAAAATTGATTGTTTTTGCAGTGGATCGACGGGTGTGACTCTAATAAAGCAGGGTCAGCACCTTGTGCTTGGAAACGTTGGTGACTCCAGAGCGGTGCTGGCTACTAGAGATGAAGATAACTCTTTGATTCCGGTTCAATTAACGGTGGACTTGAAACCTGACCTTCCTGGGGAAGCTGCTAGGATTCAGCAATGCAAAGGAAGGGTCTTTGCTTTGCAGGATGAGCCTGAAGTTGCACGAGTATGGTTGCCTAATAACGATTCACCTGGTTTGGCAATGGCGAGGGCTTTTGGAGACTTTTGTCTAAAGGATTTCGGTCTAATTTCCGTTCCAGATGTTTATTATCGTCACCTTACCGCGAGAGATCAGTTCGTAATTCTTGCCACTGATGGGGTTTGGGATGTCCTTTCGAATAAGGAAGCTATCGAAATTGTTGCGTCCGCCCCTTCTCGCGAAACAGCAGCCAGAGCTCTTGTCGACTGTGCCGTTCGTGCATGGAAGCTGAAATATCCTACATCCAAGAACGACGACTGTGCTGCTGTATGTCTTTTTCTCGAGTACGAGCCTGAAGCAGAAGAGAACATAGTAACTTGTGCTAAAGCAGTGGAAGAAGTTCTGGCCACACCAGGCGAAGAAGCTAAAGATATTGAAGTTGATTCCGATGATAGAACGACTGTTCTTGAGCGGTCAGGTACTCTACAAAGCTCTAATGAGATCATACCAGTCTGCGACTTAATCGACGAGAAAGTTGCAGCCGGAGGCCGAAACCCATCGAAGAGAAGCTTAGCTGAGTGCATTTCAAATGAAGAGGAGGAATGGTCTGCATTGGAGGGTATTACCAGAGTGAATAGTCTGCTAAGCCTTCCAAGGTTCCTATCTGGTGACAAAGGATCAGGCAGTTGGAGGAAGTGGCTATGA 1575 45.59 MGSCHSSSKGRRSSGGADFAATASAEPPTASTTEPFSSSSFLNSKSSRPRWWKKNSTKTFGVGVCSEKVHEFEVPGRICSNGSSRVACLYTQQGKKGVNQDAMVLQENFSSRKDTIFCGVFDGHGPFGHMVAKKVRDTLPLILCTQWTSKSDEDQSSLFKTRHSRSSNSEDSVALDADEDFYKSLEAEENEKFPKMFLPLKVSILKSFKLMDKELKLHPKIDCFCSGSTGVTLIKQGQHLVLGNVGDSRAVLATRDEDNSLIPVQLTVDLKPDLPGEAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDVYYRHLTARDQFVILATDGVWDVLSNKEAIEIVASAPSRETAARALVDCAVRAWKLKYPTSKNDDCAAVCLFLEYEPEAEENIVTCAKAVEEVLATPGEEAKDIEVDSDDRTTVLERSGTLQSSNEIIPVCDLIDEKVAAGGRNPSKRSLAECISNEEEEWSALEGITRVNSLLSLPRFLSGDKGSGSWRKWL 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 61844327 61855409 - Hsped.06g12220.1 Hepe06g1222 572597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1222 524 ProSiteProfiles PPM-type phosphatase domain profile. 86 404 IPR001932 -
Hepe06g1222 524 CDD PP2Cc 85 404 IPR001932 -
Hepe06g1222 524 SMART PP2C_4 75 402 IPR001932 -
Hepe06g1222 524 Pfam Protein phosphatase 2C 112 382 IPR001932 -
Hepe06g1222 524 PANTHER PROTEIN PHOSPHATASE 79 403 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe06g1222 524 MobiDBLite consensus disorder prediction 1 48 - -
Hepe06g1222 524 MobiDBLite consensus disorder prediction 25 48 - -
Hepe06g1222 524 Gene3D - 79 406 IPR036457 -
Hepe06g1222 524 FunFam probable protein phosphatase 2C 33 81 407 - -
Hepe06g1222 524 SUPERFAMILY PP2C-like 80 405 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0152 Hepe-Chr2:1671125 Hepe06g1222 Hepe-Chr6:61844327 3.11e-146 dispersed
Hepe06g1222 Hepe-Chr6:61844327 Hepe09g1273 Hepe-Chr9:17359646 1.56e-142 dispersed
Hepe06g1222 Hepe-Chr6:61844327 Hepe08g1761 Hepe-Chr8:34251428 2.84e-161 transposed
Hepe06g1222 Hepe-Chr6:61844327 Hepe08g1888 Hepe-Chr8:48728316 2.84e-161 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1222 - - - 0.0