Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe06g1255 | ATGGCGGTGGCGGTGAAGGCTTTTCCGTTCACCGTGGTAAGTCACGTGCTGGGACTCGTGGCGTTAATTTTGGTGGTGATTTGGGCTATTCACTTCCGAGGCGGCCTGGCTTGGGAGGCTGTCAATAAGGACCTCATCTTCAATATTCATCCTGTTCTTATGCTGCTCGGATTGATCATCATAGGAGGTGAAGCAATAATTAGTTATAAATCATTGCCACTGAGGAAAGAAGTGAAGAAAGTGATCCATTTGGTGCTACACGGCGTGGGTTTGATACTTGGTATTGTGGGGATCATCGCAGCATTCAAAAACCATAATGAAAGTGGGTTCGCTAATCTTTACAGCTTGCATTCTTGGATTGGAATTGGCGTAATTGTCCTCTATGGTCTCCAGTGGCTGTACGGGTTGGTGACATTCTTCTACCCAGGAGGATCCGCAGATCTCCGAAGAGCATCACTTCCATGGCACGTTCTACTCGGAATCACTGTATACATACTCGCGGTCGGCAACTCGGCGCTAGGCTTCTTAGAGAAGCTGACGTTTCTCGAGAGCTCGGGCCTCGCCAAATACGGCACCGAGGCTTTTCTCATCAACTTCACCGCCATCATCACTATACTTTTTGCAGTGTTTGTGATTCTGTCTGTTATTTCACAGCCCTCCTCCGCTGAAGAAGACAACCATAGCGCCTATTCTGCTATTTGA | 702 | 48.01 | MAVAVKAFPFTVVSHVLGLVALILVVIWAIHFRGGLAWEAVNKDLIFNIHPVLMLLGLIIIGGEAIISYKSLPLRKEVKKVIHLVLHGVGLILGIVGIIAAFKNHNESGFANLYSLHSWIGIGVIVLYGLQWLYGLVTFFYPGGSADLRRASLPWHVLLGITVYILAVGNSALGFLEKLTFLESSGLAKYGTEAFLINFTAIITILFAVFVILSVISQPSSAEEDNHSAYSAI | 233 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 62378609 | 62385391 | + | Hsped.06g12550.1 | Hepe06g1255 | 572630 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe06g1255 | 233 | CDD | Cyt_b561_ACYB-1_like | 42 | 183 | - | - | |
| Hepe06g1255 | 233 | FunFam | Cytochrome b reductase 1 | 4 | 225 | - | - | |
| Hepe06g1255 | 233 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 216 | IPR006593 | - | |
| Hepe06g1255 | 233 | SMART | 561_7 | 49 | 175 | IPR006593 | - | |
| Hepe06g1255 | 233 | PANTHER | CYTOCHROME B561-RELATED | 4 | 222 | IPR043205 | GO:0016491(InterPro)|GO:0016491(PANTHER) | |
| Hepe06g1255 | 233 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - | |
| Hepe06g1255 | 233 | Gene3D | - | 1 | 226 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe02g2597 | Hepe-Chr2:73145893 | Hepe06g1255 | Hepe-Chr6:62378609 | 5.92e-58 | dispersed | |
| Hepe06g1255 | Hepe-Chr6:62378609 | Hepe10g1863 | Hepe-Chr10:55444979 | 2.56e-40 | dispersed | |
| Hepe06g1255 | Hepe-Chr6:62378609 | Hepe02g3250 | Hepe-Chr2:82067797 | 2.00e-67 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe06g1255 | K08360 | - | csv:101209308 | 362.459 |