Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1283 ATGAAGTTCATCTTCCCCTTCCTCCAATGGCCAAAACTCCACATGCTGCCCCTTTTCATCTTCTTCTTCTTCTTTGCTTCTTCTTCTGCTTCTTCTTCGCTGCTTTCCTCTTCCCCTGCTTCTTCACTTCCACTCGATGAAGGACGAGCGCTAATGTCAATCAAGTCCTCCTTTAGCAATGTAGCTAATGTGTTGCTCGATTGGAATGATAATCATAACAATGATTTCTGCTCATGGCGTGGGGTTTTCTGCGATAATGTTAGCTTTTCCGTTGCTGCTCTGAACTTGTCTAACTTGAATCTGGGTGGGGAGATTTCACCAGCCATTGGAGATTTGAGAAATTTACAGTCAATTGACCTTCAAGGGAATAAACTGACTGGTCAAATCCCTGATGAGATTGGTAACTGTGGTCTTCTTGTCCATTTGGACTTGTCTGATAATTTGCTTTATGGAGACATCCCCTTCACGGTATCCAAGCTAAAGCAGCTCGAGTTTTTAAATCTAAAGAACAATCAGCTGACCGGCCCGATCCCTTCGACCCTCACTCAGATTCCTAATCTGAAAACTCTTGACCTTGCACGAAACCAGCTTACTGGGGAGATACCTAGATTAATATATTGGAATGAAGTACTGCAATATCTTGGATTGCGAGGGAATTTCTTGACGGGGTCATTGTCCTCCGACATGTGTCAGTTGACTGGCTTGTGGTACTTTGATGTGAGGGGCAATAATCTGACTGGCACAATACCGGATAGCATAGGAAACTGTACTAGTTTCGAAATTCTGGATATATCCTACAATCAGATTTCGGGGGAGATTCCTTACAACATTGGATTTCTTCAAGTGGCTACATTATCATTACAGGGAAATAGGCTGACCGGTAAGATTCCCGATGTCATTGGATTGATGCAGGCCCTTGCTGTCTTGGATTTGAGTGAGAATGAACTTGAAGGGCCAATACCGCCAATACTTGGCAACTTGTCTTACACAGGAAAATTGTACCTACATGGAAACAAGTTGACCGGGCCAATTCCTCCTGAGCTGGGCAATATGTCAAAGCTTAGCTACTTGCAACTAAACGATAACCAGCTGGTTGGCACAATTCCTTCTGAACTTGGAAAATTGGATCAGTTGTTCGAATTGAATCTTGCTAATAATTATCTTGAAGGACCCATCCCTCCCAACATCAGCTCTTGCACTGCACTCAATCAATTCAATGTGCATGGAAACCGTCTTAATGGATCAATTCCTTTGGGTCTCCAAGATCTGGAAAGCTTGACCTATTTGAATCTTTCGGCAAACAACTTCAAAGGCAGGATTCCGGTTGAGCTGGGACGGATAGTTAACCTCGATACCTTGGATCTATCTCGCAATTACTTCTCGGGCCCTGTTCCTGCTTCTATTGGCGATTTGGAGCACCTGCTTAGCCTCAATTTGAGCAATAATCAACTAGTTGGGCCATTGCCAGCAGAATTTGGGAATCTCCGGAGCGTTCAAACTATTGATATGTCATTCAACAACATCTCTGGTAGCATACCCATGGAGTTGGGTCAACTGCAAAATGTTATCTCCCTGTATGTTTCTCGATACTCTTGTGATTTCTGTTTTATTCTTCATCAACAACTACCTAGTGCTTCCTCAACTTCTAATTTATCTCTCTTATACCTATTCAGGAACTTGTCATACAACAACTTATCCGGTATCTTGCCTCCCATGAAAAATTTCTCTAGATTCGAACCAAATAGTTTTATCGGGAATCCGCTTCTGTGTGGAAACTGGCTGGGTTCGATCTGTGGGCCTTACATGGGAAAATCTCGAGCCATGTTTTCCCGGACCGCGGTTGTTTGTATGACATTTGGATTCATTATATTGTTGTCGATGGTTATAATTGCTGTGTACAAGTCGAATCCATCACATCAATTGATGAAGGGTTCTAACAAGACTGGGCAAGGTCCTCCAAATCTTGTGGTACTTCATATGGATATGGCCATTCACACCTTTGATGACATTATGAGAGTGACCGAGAATCTAAGCGAGAAGTACATTATCGGTTATGGAGCCTCGAGCACTGTGTACAAATGTATACTGAAAAATTCCCGACCTCTTGCAATTAAGCGACTTTACAATCACTATGGACACAATTTACGGGAGTTTGAGACCGAACTCGAAACCATTGGTAGTATTAGACATAGAAATCTTGTTGTCCTTCATGGTTATTCATTATCTCCCTGTGGGAATCTCCTCTTCTATGACTACATGGTAAATGGTTCACTCTGGGATCTTCTTCATGGGCCAGGAAAGAAGGTTAAACTGGACTGGGAAGCACGTCTGAAGATTGCGGCCCATCTTTCTGATTTTGGGATCGCCAAATGTATCCCTACTGCCAAAACACATGCGTCGACTTATGTGCTTGGAACAATTGGCTACATTGATCCAGAGTATGCTCGTACCTCCCGGATTAATGAGAAGTCTGATGTTTATAGCTTTGGCATTGTTCTTCTGGAACTACTAACTGGGAAGAAAGCTGTGGATAATGAGTCCAATTTGCATCAACTGATAATGTCAAAGGCTGATAACAATACCGTGATGGAGGCTGTTGATCCGGATGTTTCGGTCACCTGCATTGATTTAGCCCATGTTCGAAAAACGTTCCAGCTTGCTCTCCTCTGCACAAAACACAGTCCCTCAGAACGGCCAACCATGCATGAAGTTGCACGAGTACTGATTTCCCTCCAGCCACCACTGCCTACTGTGAAACAAACTACATTCCCCACGAAAACGTTGGATTATGCACAATTCGTGATCGATAAGGGTCAGAATCAAAACGTGAAAGGGCAGGAGGAGCAGCAGAAATCAGATGTGAATTCTTCGGATGCTCGGTGGTTTGTTCAGTTCGGGGAAGTTATATCGGAACAACACAGTTTGAATCAATAA 2934 43.25 MKFIFPFLQWPKLHMLPLFIFFFFFASSSASSSLLSSSPASSLPLDEGRALMSIKSSFSNVANVLLDWNDNHNNDFCSWRGVFCDNVSFSVAALNLSNLNLGGEISPAIGDLRNLQSIDLQGNKLTGQIPDEIGNCGLLVHLDLSDNLLYGDIPFTVSKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNFLTGSLSSDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQISGEIPYNIGFLQVATLSLQGNRLTGKIPDVIGLMQALAVLDLSENELEGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLNDNQLVGTIPSELGKLDQLFELNLANNYLEGPIPPNISSCTALNQFNVHGNRLNGSIPLGLQDLESLTYLNLSANNFKGRIPVELGRIVNLDTLDLSRNYFSGPVPASIGDLEHLLSLNLSNNQLVGPLPAEFGNLRSVQTIDMSFNNISGSIPMELGQLQNVISLYVSRYSCDFCFILHQQLPSASSTSNLSLLYLFRNLSYNNLSGILPPMKNFSRFEPNSFIGNPLLCGNWLGSICGPYMGKSRAMFSRTAVVCMTFGFIILLSMVIIAVYKSNPSHQLMKGSNKTGQGPPNLVVLHMDMAIHTFDDIMRVTENLSEKYIIGYGASSTVYKCILKNSRPLAIKRLYNHYGHNLREFETELETIGSIRHRNLVVLHGYSLSPCGNLLFYDYMVNGSLWDLLHGPGKKVKLDWEARLKIAAHLSDFGIAKCIPTAKTHASTYVLGTIGYIDPEYARTSRINEKSDVYSFGIVLLELLTGKKAVDNESNLHQLIMSKADNNTVMEAVDPDVSVTCIDLAHVRKTFQLALLCTKHSPSERPTMHEVARVLISLQPPLPTVKQTTFPTKTLDYAQFVIDKGQNQNVKGQEEQQKSDVNSSDARWFVQFGEVISEQHSLNQ 977
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 62800840 62810566 + Hsped.06g12830.1 Hepe06g1283 572658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1283 977 Gene3D Ribonuclease Inhibitor 45 208 IPR032675 -
Hepe06g1283 977 SUPERFAMILY RNI-like 231 571 - -
Hepe06g1283 977 Pfam Protein tyrosine and serine/threonine kinase 682 775 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe06g1283 977 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 28 402 IPR050647 GO:0009553(PANTHER)|GO:0010103(PANTHER)|GO:0048481(PANTHER)
Hepe06g1283 977 Gene3D Transferase(Phosphotransferase) domain 1 783 920 - -
Hepe06g1283 977 SUPERFAMILY L domain-like 45 280 - -
Hepe06g1283 977 SMART LRR_typ_2 351 375 IPR003591 -
Hepe06g1283 977 SMART LRR_typ_2 423 447 IPR003591 -
Hepe06g1283 977 SMART LRR_typ_2 112 136 IPR003591 -
Hepe06g1283 977 SMART LRR_typ_2 232 256 IPR003591 -
Hepe06g1283 977 SMART LRR_typ_2 160 183 IPR003591 -
Hepe06g1283 977 SMART LRR_typ_2 495 519 IPR003591 -
Hepe06g1283 977 SMART LRR_typ_2 184 208 IPR003591 -
Hepe06g1283 977 SMART LRR_typ_2 303 327 IPR003591 -
Hepe06g1283 977 SMART LRR_typ_2 471 494 IPR003591 -
Hepe06g1283 977 Gene3D Transferase(Phosphotransferase) domain 1 657 782 - -
Hepe06g1283 977 ProSiteProfiles Leucine-rich repeat profile. 186 208 IPR001611 GO:0005515(InterPro)
Hepe06g1283 977 SUPERFAMILY Protein kinase-like (PK-like) 653 921 IPR011009 -
Hepe06g1283 977 Gene3D Ribonuclease Inhibitor 209 319 IPR032675 -
Hepe06g1283 977 Pfam Leucine rich repeat 449 508 IPR001611 GO:0005515(InterPro)
Hepe06g1283 977 Pfam Leucine rich repeat N-terminal domain 46 85 IPR013210 -
Hepe06g1283 977 ProSitePatterns Protein kinases ATP-binding region signature. 683 705 IPR017441 GO:0005524(InterPro)
Hepe06g1283 977 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 45 208 - -
Hepe06g1283 977 Pfam Protein kinase domain 782 905 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g1283 977 ProSiteProfiles Protein kinase domain profile. 677 915 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g1283 977 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 209 318 - -
Hepe06g1283 977 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 319 601 - -
Hepe06g1283 977 Gene3D Ribonuclease Inhibitor 320 600 IPR032675 -
Hepe06g1283 977 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 648 752 - -
Hepe06g1283 977 Pfam Leucine Rich Repeat 114 136 IPR001611 GO:0005515(InterPro)
Hepe06g1283 977 Pfam Leucine Rich Repeat 162 182 IPR001611 GO:0005515(InterPro)
Hepe06g1283 977 Pfam Leucine Rich Repeat 378 399 IPR001611 GO:0005515(InterPro)
Hepe06g1283 977 Pfam Leucine Rich Repeat 332 351 IPR001611 GO:0005515(InterPro)
Hepe06g1283 977 Pfam Leucine Rich Repeat 353 375 IPR001611 GO:0005515(InterPro)
Hepe06g1283 977 Pfam Leucine Rich Repeat 306 327 IPR001611 GO:0005515(InterPro)
Hepe06g1283 977 Pfam Leucine Rich Repeat 425 445 IPR001611 GO:0005515(InterPro)
Hepe06g1283 977 Pfam Leucine Rich Repeat 235 256 IPR001611 GO:0005515(InterPro)
Hepe06g1283 977 Pfam Leucine Rich Repeat 260 280 IPR001611 GO:0005515(InterPro)
Hepe06g1283 977 Pfam Leucine Rich Repeat 186 205 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1283 Hepe-Chr6:62800840 Hepe01g1477 Hepe-Chr1:80076338 7.54e-50 dispersed
Hepe01g1920 Hepe-Chr1:84021135 Hepe06g1283 Hepe-Chr6:62800840 5.93e-144 transposed
Hepe06g1283 Hepe-Chr6:62800840 Hepe07g0174 Hepe-Chr7:1547408 1.38e-38 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72876 PF00069 Pkinase 1.60E-12 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1283 K20718 - csv:101213139 1668.67