Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe06g1336 | ATGGAGGAGAAAGAGGGAGTGGATTTTGGGTTTGCAGTAAAAGTGAGCCAAGTTCCAGAAAGCTTCGGGATGATGGATTCGAGACCTGATAATACAAGCACAGATAGCGAACCGACGGCGGAAGCAGTTCTGACTCCGGCGGCGGTTACGAATGGAAAGAAGAAAAGAGGGAGGCCGAGAAAGTACCGGCCTGATGGGACTGTAGCACCACCAACATTGTCGCCAATGCCGATTTCGTCATCGATTCCGCTGACCGGAGAGTTTCCGGGTTGGAAACAGGGAAAAGGGCGGCCAGTAGAGTCGATTAAGAAGTCTAGGAAGTTCGAGTATGAGATTCCAGGTAACAAGGTTGCCTTCTTTGCTGGAGCAGATTTCACACCTCACGTGATTACTGTTAACATTGGTGAGGACGTTAACTTGAAAGTCATGTCATTTTCTCAACAAGGATCTCGAGCGATTTGTATACTCTCTGCTAATGGTATGATATCGAATGTTACACTTCGGCAGTCAACATCTTCCGGGGGTACTCTAACATATGAGGGTCGATTCGAGATACTTTCATTGTCTGGATCGTATATGCCTTCTGAAATTGGTGGAACGAAGAGCCGATCTGGAGGGATGAGTGTCTCTTTGGCTGGCCCAGATGGCCGAGTGATGGGTGGAGGACTTGCCGGCATGCTGATCGCAGCTGGTCCAGTGCAGGTGGTGGTGGGAAGTTTCCTACCACCAGGTCACCAGCAGGAAAATAAACCAAAGAAGAGTAGGATGGAACCTACATCAAATGCAATTTCACCTCCAGCCATGAAGCCCATTGTCAAATCCTCTCTGATAGGAGATAAAGCAGCTTCTTTAGACCCAACTCCAGCTTTTAGAACTCCACCAGTCAGCGAAAAATCACATTTTACAGAAGAATCAAGAGGTGTCCTCAACCATTCAAACCATGAGGTTTCTTGTTGA | 957 | 47.75 | MEEKEGVDFGFAVKVSQVPESFGMMDSRPDNTSTDSEPTAEAVLTPAAVTNGKKKRGRPRKYRPDGTVAPPTLSPMPISSSIPLTGEFPGWKQGKGRPVESIKKSRKFEYEIPGNKVAFFAGADFTPHVITVNIGEDVNLKVMSFSQQGSRAICILSANGMISNVTLRQSTSSGGTLTYEGRFEILSLSGSYMPSEIGGTKSRSGGMSVSLAGPDGRVMGGGLAGMLIAAGPVQVVVGSFLPPGHQQENKPKKSRMEPTSNAISPPAMKPIVKSSLIGDKAASLDPTPAFRTPPVSEKSHFTEESRGVLNHSNHEVSC | 318 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 63565499 | 63571741 | - | Hsped.06g13360.1 | Hepe06g1336 | 572711 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe06g1336 | 318 | CDD | DUF296 | 126 | 240 | IPR005175 | - | |
Hepe06g1336 | 318 | ProSiteProfiles | PPC domain profile profile. | 122 | 261 | IPR005175 | - | |
Hepe06g1336 | 318 | MobiDBLite | consensus disorder prediction | 282 | 318 | - | - | |
Hepe06g1336 | 318 | FunFam | AT-hook motif nuclear-localized protein 1-like | 127 | 258 | - | - | |
Hepe06g1336 | 318 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 127 | 240 | IPR005175 | - | |
Hepe06g1336 | 318 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 124 | 253 | - | - | |
Hepe06g1336 | 318 | MobiDBLite | consensus disorder prediction | 240 | 269 | - | - | |
Hepe06g1336 | 318 | MobiDBLite | consensus disorder prediction | 26 | 40 | - | - | |
Hepe06g1336 | 318 | Gene3D | - | 127 | 257 | - | - | |
Hepe06g1336 | 318 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 27 | 280 | IPR039605 | GO:0003680(InterPro) | |
Hepe06g1336 | 318 | MobiDBLite | consensus disorder prediction | 21 | 97 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe06g1336 | Hepe-Chr6:63565499 | Hepe06g1625 | Hepe-Chr6:67129009 | 6.83e-88 | dispersed | |
Hepe06g1336 | Hepe-Chr6:63565499 | Hepe07g0228 | Hepe-Chr7:2171780 | 1.60e-99 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe06g1336 | - | - | - | 0.0 |