Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1336 ATGGAGGAGAAAGAGGGAGTGGATTTTGGGTTTGCAGTAAAAGTGAGCCAAGTTCCAGAAAGCTTCGGGATGATGGATTCGAGACCTGATAATACAAGCACAGATAGCGAACCGACGGCGGAAGCAGTTCTGACTCCGGCGGCGGTTACGAATGGAAAGAAGAAAAGAGGGAGGCCGAGAAAGTACCGGCCTGATGGGACTGTAGCACCACCAACATTGTCGCCAATGCCGATTTCGTCATCGATTCCGCTGACCGGAGAGTTTCCGGGTTGGAAACAGGGAAAAGGGCGGCCAGTAGAGTCGATTAAGAAGTCTAGGAAGTTCGAGTATGAGATTCCAGGTAACAAGGTTGCCTTCTTTGCTGGAGCAGATTTCACACCTCACGTGATTACTGTTAACATTGGTGAGGACGTTAACTTGAAAGTCATGTCATTTTCTCAACAAGGATCTCGAGCGATTTGTATACTCTCTGCTAATGGTATGATATCGAATGTTACACTTCGGCAGTCAACATCTTCCGGGGGTACTCTAACATATGAGGGTCGATTCGAGATACTTTCATTGTCTGGATCGTATATGCCTTCTGAAATTGGTGGAACGAAGAGCCGATCTGGAGGGATGAGTGTCTCTTTGGCTGGCCCAGATGGCCGAGTGATGGGTGGAGGACTTGCCGGCATGCTGATCGCAGCTGGTCCAGTGCAGGTGGTGGTGGGAAGTTTCCTACCACCAGGTCACCAGCAGGAAAATAAACCAAAGAAGAGTAGGATGGAACCTACATCAAATGCAATTTCACCTCCAGCCATGAAGCCCATTGTCAAATCCTCTCTGATAGGAGATAAAGCAGCTTCTTTAGACCCAACTCCAGCTTTTAGAACTCCACCAGTCAGCGAAAAATCACATTTTACAGAAGAATCAAGAGGTGTCCTCAACCATTCAAACCATGAGGTTTCTTGTTGA 957 47.75 MEEKEGVDFGFAVKVSQVPESFGMMDSRPDNTSTDSEPTAEAVLTPAAVTNGKKKRGRPRKYRPDGTVAPPTLSPMPISSSIPLTGEFPGWKQGKGRPVESIKKSRKFEYEIPGNKVAFFAGADFTPHVITVNIGEDVNLKVMSFSQQGSRAICILSANGMISNVTLRQSTSSGGTLTYEGRFEILSLSGSYMPSEIGGTKSRSGGMSVSLAGPDGRVMGGGLAGMLIAAGPVQVVVGSFLPPGHQQENKPKKSRMEPTSNAISPPAMKPIVKSSLIGDKAASLDPTPAFRTPPVSEKSHFTEESRGVLNHSNHEVSC 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 63565499 63571741 - Hsped.06g13360.1 Hepe06g1336 572711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1336 318 CDD DUF296 126 240 IPR005175 -
Hepe06g1336 318 ProSiteProfiles PPC domain profile profile. 122 261 IPR005175 -
Hepe06g1336 318 MobiDBLite consensus disorder prediction 282 318 - -
Hepe06g1336 318 FunFam AT-hook motif nuclear-localized protein 1-like 127 258 - -
Hepe06g1336 318 Pfam Plants and Prokaryotes Conserved (PCC) domain 127 240 IPR005175 -
Hepe06g1336 318 SUPERFAMILY AF0104/ALDC/Ptd012-like 124 253 - -
Hepe06g1336 318 MobiDBLite consensus disorder prediction 240 269 - -
Hepe06g1336 318 MobiDBLite consensus disorder prediction 26 40 - -
Hepe06g1336 318 Gene3D - 127 257 - -
Hepe06g1336 318 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 27 280 IPR039605 GO:0003680(InterPro)
Hepe06g1336 318 MobiDBLite consensus disorder prediction 21 97 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1336 Hepe-Chr6:63565499 Hepe06g1625 Hepe-Chr6:67129009 6.83e-88 dispersed
Hepe06g1336 Hepe-Chr6:63565499 Hepe07g0228 Hepe-Chr7:2171780 1.60e-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1336 - - - 0.0