Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe06g1352 | ATGGCCCCTACTTCCCTCGCTTCCCGCTTCAAACAATCCGTCACCCCGACCGCCCTCCGATCCTATGCCGCTGAGTTCATCTCCACCTTCTTCTACGTCTTCTCCGTCGTCGGATCATCAATGGCGTCTCAGAAGTTGATGCCCGGCGCCACAACGACAGACCCGTCGAGTCTTCTGGTCGCTGCTGTTGCCAATGTCTTTGCTTTAGCCGCCGCCGTTTACCTCGCTGCCAACATCTCTGGCGGACATGTCAACCCGGCGGTGACGTTTGGCATGGCCGTCAGCGGCCATGTCAGTGTTCCCACTGCTCTGTTCTACTGGTTTGCTCAAATGCTTGCCTCTGTCATGGCCTGCATTGTTCTCAGAGTCTCCATTGTTGGACAGCGCGTTCCAAGCTATGGCATTGCCGAGGAGATGACTGGCTTCGGAGCGTCGATAGTGGAAGGCATATTGACGTTTGCCCTAGTGTACACTGTTTTCGCGGCCAGCGACAGCAGAAGAGGTCCATGCAATGCAATTGGCGCGGTGATGGTCGGGCTGATGGCCGGAGCCAATGTGCTGGCTGCCGGGCCGTTCTCTGGTGGGTCGGTGAACCCGGCGTGCGCATTCGGGTCGGCGATTGTGTCGGGGAGTTTCAAGAACCAGGCAGTGTACTGGGTTGGGCCATTGATTGGGGCTGCTCTCGCCGGAATTGTTCATGATAATGTGGTTTTTCCGGCTGAAAATATAGATTCATTCAGAGGGGGTGCTCAGGCTGTTGTGGTGTAG | 768 | 56.64 | MAPTSLASRFKQSVTPTALRSYAAEFISTFFYVFSVVGSSMASQKLMPGATTTDPSSLLVAAVANVFALAAAVYLAANISGGHVNPAVTFGMAVSGHVSVPTALFYWFAQMLASVMACIVLRVSIVGQRVPSYGIAEEMTGFGASIVEGILTFALVYTVFAASDSRRGPCNAIGAVMVGLMAGANVLAAGPFSGGSVNPACAFGSAIVSGSFKNQAVYWVGPLIGAALAGIVHDNVVFPAENIDSFRGGAQAVVV | 255 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 63746089 | 63748321 | - | Hsped.06g13520.1 | Hepe06g1352 | 572727 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe06g1352 | 255 | PRINTS | Major intrinsic protein family signature | 65 | 89 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe06g1352 | 255 | PRINTS | Major intrinsic protein family signature | 102 | 121 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe06g1352 | 255 | PRINTS | Major intrinsic protein family signature | 147 | 165 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe06g1352 | 255 | PRINTS | Major intrinsic protein family signature | 20 | 39 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe06g1352 | 255 | PRINTS | Major intrinsic protein family signature | 179 | 201 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe06g1352 | 255 | PRINTS | Major intrinsic protein family signature | 216 | 236 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe06g1352 | 255 | PANTHER | AQUAPORIN-8 | 10 | 239 | IPR034294 | GO:0006833(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER) | |
Hepe06g1352 | 255 | FunFam | Probable aquaporin TIP5-1 | 4 | 245 | - | - | |
Hepe06g1352 | 255 | Pfam | Major intrinsic protein | 15 | 233 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe06g1352 | 255 | Gene3D | Glycerol uptake facilitator protein. | 5 | 246 | IPR023271 | - | |
Hepe06g1352 | 255 | SUPERFAMILY | Aquaporin-like | 13 | 242 | IPR023271 | - | |
Hepe06g1352 | 255 | ProSitePatterns | MIP family signature. | 83 | 91 | IPR022357 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe06g1352 | Hepe-Chr6:63746089 | Hepe06g1681 | Hepe-Chr6:67823776 | 5.36e-67 | dispersed | |
Hepe06g1352 | Hepe-Chr6:63746089 | Hepe03g1531 | Hepe-Chr3:72168875 | 4.23e-63 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe06g1352 | K09873 | - | csv:101214078 | 421.394 |