Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1352 ATGGCCCCTACTTCCCTCGCTTCCCGCTTCAAACAATCCGTCACCCCGACCGCCCTCCGATCCTATGCCGCTGAGTTCATCTCCACCTTCTTCTACGTCTTCTCCGTCGTCGGATCATCAATGGCGTCTCAGAAGTTGATGCCCGGCGCCACAACGACAGACCCGTCGAGTCTTCTGGTCGCTGCTGTTGCCAATGTCTTTGCTTTAGCCGCCGCCGTTTACCTCGCTGCCAACATCTCTGGCGGACATGTCAACCCGGCGGTGACGTTTGGCATGGCCGTCAGCGGCCATGTCAGTGTTCCCACTGCTCTGTTCTACTGGTTTGCTCAAATGCTTGCCTCTGTCATGGCCTGCATTGTTCTCAGAGTCTCCATTGTTGGACAGCGCGTTCCAAGCTATGGCATTGCCGAGGAGATGACTGGCTTCGGAGCGTCGATAGTGGAAGGCATATTGACGTTTGCCCTAGTGTACACTGTTTTCGCGGCCAGCGACAGCAGAAGAGGTCCATGCAATGCAATTGGCGCGGTGATGGTCGGGCTGATGGCCGGAGCCAATGTGCTGGCTGCCGGGCCGTTCTCTGGTGGGTCGGTGAACCCGGCGTGCGCATTCGGGTCGGCGATTGTGTCGGGGAGTTTCAAGAACCAGGCAGTGTACTGGGTTGGGCCATTGATTGGGGCTGCTCTCGCCGGAATTGTTCATGATAATGTGGTTTTTCCGGCTGAAAATATAGATTCATTCAGAGGGGGTGCTCAGGCTGTTGTGGTGTAG 768 56.64 MAPTSLASRFKQSVTPTALRSYAAEFISTFFYVFSVVGSSMASQKLMPGATTTDPSSLLVAAVANVFALAAAVYLAANISGGHVNPAVTFGMAVSGHVSVPTALFYWFAQMLASVMACIVLRVSIVGQRVPSYGIAEEMTGFGASIVEGILTFALVYTVFAASDSRRGPCNAIGAVMVGLMAGANVLAAGPFSGGSVNPACAFGSAIVSGSFKNQAVYWVGPLIGAALAGIVHDNVVFPAENIDSFRGGAQAVVV 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 63746089 63748321 - Hsped.06g13520.1 Hepe06g1352 572727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1352 255 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1352 255 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1352 255 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1352 255 PRINTS Major intrinsic protein family signature 20 39 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1352 255 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1352 255 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1352 255 PANTHER AQUAPORIN-8 10 239 IPR034294 GO:0006833(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER)
Hepe06g1352 255 FunFam Probable aquaporin TIP5-1 4 245 - -
Hepe06g1352 255 Pfam Major intrinsic protein 15 233 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1352 255 Gene3D Glycerol uptake facilitator protein. 5 246 IPR023271 -
Hepe06g1352 255 SUPERFAMILY Aquaporin-like 13 242 IPR023271 -
Hepe06g1352 255 ProSitePatterns MIP family signature. 83 91 IPR022357 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1352 Hepe-Chr6:63746089 Hepe06g1681 Hepe-Chr6:67823776 5.36e-67 dispersed
Hepe06g1352 Hepe-Chr6:63746089 Hepe03g1531 Hepe-Chr3:72168875 4.23e-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1352 K09873 - csv:101214078 421.394