Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1388 ATGCTCAAATTAATTCTTATAGTTGTTTCCGCCACCATTTTCATACTCCTCCTAATTTCCATCTTCTTCCTCCGCCGTAAGCTCTCAAAAACAAAACCCACACACGACGTCGAGAAGCCGCCCTCGTCGGAGAAGAAAAAACAAGACACGACGGCGACGGCGGAGCTGGTGACTTTTGAGGGTGGCGAGGATTTGACGATCGACGAGATTCTAGAAGCTCCGGGGGAAGTGATCGGAAAATCCCACTATGGAACTCTGTACATGGCTTCGTTACAGAGCACCCAACGGATTAGATTGCTCAGATTCCTCCGCCCGGCCGCCGTCGAACATTCCGCCGGAGACGACGTCGTTCGGGTTCTGGGTTCGATTAGGCACCGGAATTTGGTGCCGTTGCTGGGATTTTACGCCGGCGGGAGGGGGGAGAGGCTTCTAATTCATCCGTTTTACGGCAGGGGGAATTTGGAGGAGTTCATTAGAGAAGGAGAATCAGAATCCAAAAATTGGGAGATCATTTACAAAATCTCCCTCCGAATCGCAAAAGCCCTAAATCATCTTCACAACGGATTGCAAAAACCAGTACCCCACGGAAATCTCAACTCCAAGAACATTCTTCTCGATCGAAATTTCGACCCCTACGTCTCTGATTTCGGTCTCCATCTCCTCCTCAACGCCGCCGCAACTCGAGAAATGCTCCAAATTTCCTCCGCCTCCGGCTACAAGCCGCCGGAGCTGGTCAAGATGACCGACGCCGACGAACGGACCGACGTCTACAGCTACGGCAAGATCTTACTCGAGTTGCTCGAGCCGACGAATCGGAATTCGGTTGATACCGGCGGAGACGGCGGCGATTCCGGTGTTTCTGAAGAGCGGAATCTCCGATGCCTTTTTCAAATCGGCGAGGCTTGTTGTTCTTCTTCGCCGGATCTTCGGCCGGATTTCAAGGAAGTGATTGCGAAGATTGAAGAAATCGGAAGGATTGAGATGGATTTTGATTGCGGCAAAGAGGGCTAG 1011 51.53 MLKLILIVVSATIFILLLISIFFLRRKLSKTKPTHDVEKPPSSEKKKQDTTATAELVTFEGGEDLTIDEILEAPGEVIGKSHYGTLYMASLQSTQRIRLLRFLRPAAVEHSAGDDVVRVLGSIRHRNLVPLLGFYAGGRGERLLIHPFYGRGNLEEFIREGESESKNWEIIYKISLRIAKALNHLHNGLQKPVPHGNLNSKNILLDRNFDPYVSDFGLHLLLNAAATREMLQISSASGYKPPELVKMTDADERTDVYSYGKILLELLEPTNRNSVDTGGDGGDSGVSEERNLRCLFQIGEACCSSSPDLRPDFKEVIAKIEEIGRIEMDFDCGKEG 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 64090344 64093291 + Hsped.06g13880.1 Hepe06g1388 572763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1388 336 Gene3D Transferase(Phosphotransferase) domain 1 66 331 - -
Hepe06g1388 336 ProSiteProfiles Protein kinase domain profile. 72 323 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g1388 336 MobiDBLite consensus disorder prediction 33 52 - -
Hepe06g1388 336 MobiDBLite consensus disorder prediction 33 51 - -
Hepe06g1388 336 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 4 324 IPR052451 -
Hepe06g1388 336 Pfam Protein tyrosine and serine/threonine kinase 76 319 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe06g1388 336 SUPERFAMILY Protein kinase-like (PK-like) 75 322 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1388 Hepe-Chr6:64090344 Hepe01g0674 Hepe-Chr1:68953899 6.87e-44 dispersed
Hepe06g1388 Hepe-Chr6:64090344 Hepe07g0268 Hepe-Chr7:2694704 1.81e-27 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72882 PF07714 PK_Tyr_Ser-Thr 9.10E-24 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1388 - - - 0.0