Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1389 ATGCCACAGATGCCACAAAGTTGCACATTTATGGAGGGGATGGAAGATGAAGCCGATAGAAATCTTATGTTGCTGCCTTCCCCTTCTCCAGTTATAGCAGTTGCTATCAGTGGGAAGAAAAACAGTAAATATATAATTAGGTGGTCATTGGAAAAGTTTCTACCTGAGGGCATCATCAATTTCAAGTTGCTACACTTCATCCCAAGGATTACTAGTGTCCCAACTCCAAATTGCGTATTCAAGCTATATGCCAATGTTGATGCAGTGGGAAATTTAATTCCGGTTTCACAAGTCCGTGAGGATGTTGCTGCGGCTTATAGGAAAGAAATCGGGTGGCAGACGAGTGAAAAGCTTCTTCCATATAAGAAGATGTTTGCTCAGAGAAAGGTTCAACTTGATGTTGTGACTCTTGAAACAGATGATGTGGCAAATGCAATAATAGAAGAGGTTACAAAGTGTTCAATCAGCAAGCTTGTTATAGGAGTTTCATCACAGGGATTTTTCTCAAGGAATAACGGTCTATCCTCAAGAATATCAGCCATTGCACCTAGATATTGTACAGTCTATGCTATTTCAAAAGGAAAATTAGCCTCAATACGACCACCTGATATGGAGACGAACATGAGCATTAAAGATGATGTGAGTGAAGCAAGTTCTGCAAATAGCTACTCAAGCTATTCTTCTAGCTCACTTACAGATGGCAGCTCGAGCTTAATTACATCCTACTCTCATTTCCCTTCTCCTTCCCCTTCCCTACCATTACAACGATTTCAAGCTCTTTCAACCATCAATCAACCTCTTGCAACGAAAACAAGCTCCATTAAATCCAACCATTCTAAATGTCAATCCGTTGATATTGAGGAGCAGGTGGATGGCGTTCGTTCTTCTTCCTATGTTTTAGATTGCGTACAAACATTGAGTCGGGCCTCTAGTTGTAAAAGCGTGCCAACAGATAACCAGTCTTGGGTTTCTAATGAAGCTTCATCCTCGGGCGCGTTCAATGATTATTCTTCATGTGAAAGTCAGGCGGATGTCAACTTTGAGCTTGAAAAGTTGAGAATCGAACTAAGACATGCAAGAGGAATGTATGCAATTGCTCAACGCGAGACGATCGATGCCTCTCGAAAGCTGGGTCATCTGAATAAACAACGATCGGAGGAAGCTAGGAAGCTCGAAGAGATCAACAACAAAGAGGTGGTTGCCAAAGAATTTGTGAGGGAAGAGAGAGTGAAGCGTGAAGCTTTGAGAAGAGAAGCAAAGTATTTAAAAGAACGCGCCGAAAGAGAGGGCATGTATAGGAAGGAAGCAGAGACAAAAGCTCATCAGGATGCCAAAGAGAAGGGAAAGCATGAGAATGCTCTTCAAGGACCTCTTCAGCAATACCAACATTTTCAGTGGGAAGATATTGTTTCGGCCACATCATCTTTCTCTGAGGATCTTAAGATTGGAATGGGAGCAAATGGAACAGTTTATAAGTGCAGTTTGCATCATACAACTGTAGCAGTGAAGGTTCTTCACTCTAGAGATGGTCACAAAAAGATGCAATTTCTTCAGGAGCTCGAAATCTTGAGCAAAATCCATCATCCCCATCTACTACTACTCCTCGGTGCTTGTCCGGATAAGAATTGCCTGGTTTATGAGTACATGGAAAATGGTAGCTTGGAGGATAGGTTGTACCGCAGAGCCAATACACCTGCAATCCCATGGTATGAGCGGTTTCGAATTGCTTGGGAAATAGCCTCTGCTCTTGTCTTTCTTCACAGCTCAAAGCCAAAACCAATAATCCACCGTGATCTTAAGCCAGCGAACATCTTACTTGACCAAAACCTCGTGAGCAAAATCGGCGACGTCGGTCTTTCTACAGTGTTTAGTTCAGACCCTTTAATGTCTACTGCATTCAAGGATAGTGGACCAGTTGGAACTCTCTGTTACATAGATCCCGAGTATCAACGAACCGGATTACTCTCACCTAAGTCTGATGTATATGCTTTTGGAATGGTGATCTTGCAGTTACTAACTGCAAAACCAGCAGTAGCATTAACCCATGTGGTTGAAACAGCCATTGATAACCACACTTTAATAAAGGTTCTAGACATAGAGGCTGGGGATTGGCCCGTCGAAGAGACGTATGAATTGGCGAGATTAGGACTTCGCTGTTCCGAGCTGCAACGTAAAGATAGGCCTGACTTAAAGGATCAAGTACTTCCCTTGTTGCTGACACTGAAAAAGGTTGCTGATGAGGCTCGCAATTCGGCCTCCAAAGTTCCAGCTGCAATTCCTAATCATTTCATCTGTCCAATTCTTCAGGACGTGATGAATGACCCTTGTGTTGCGGCGGATGGATACACATACGACCGTCGGGCAATAGAGAAGTGGCTTCAGGAGAACGATAACTCACCAATGACGATGTTGCCACTGCCCTATAAGAATTTAATACCAAATTACAGTCTTCTCTCTGCAATTGTTGAGTGGAACTCCAGAAGAAACTAA 2490 42.93 MPQMPQSCTFMEGMEDEADRNLMLLPSPSPVIAVAISGKKNSKYIIRWSLEKFLPEGIINFKLLHFIPRITSVPTPNCVFKLYANVDAVGNLIPVSQVREDVAAAYRKEIGWQTSEKLLPYKKMFAQRKVQLDVVTLETDDVANAIIEEVTKCSISKLVIGVSSQGFFSRNNGLSSRISAIAPRYCTVYAISKGKLASIRPPDMETNMSIKDDVSEASSANSYSSYSSSSLTDGSSSLITSYSHFPSPSPSLPLQRFQALSTINQPLATKTSSIKSNHSKCQSVDIEEQVDGVRSSSYVLDCVQTLSRASSCKSVPTDNQSWVSNEASSSGAFNDYSSCESQADVNFELEKLRIELRHARGMYAIAQRETIDASRKLGHLNKQRSEEARKLEEINNKEVVAKEFVREERVKREALRREAKYLKERAEREGMYRKEAETKAHQDAKEKGKHENALQGPLQQYQHFQWEDIVSATSSFSEDLKIGMGANGTVYKCSLHHTTVAVKVLHSRDGHKKMQFLQELEILSKIHHPHLLLLLGACPDKNCLVYEYMENGSLEDRLYRRANTPAIPWYERFRIAWEIASALVFLHSSKPKPIIHRDLKPANILLDQNLVSKIGDVGLSTVFSSDPLMSTAFKDSGPVGTLCYIDPEYQRTGLLSPKSDVYAFGMVILQLLTAKPAVALTHVVETAIDNHTLIKVLDIEAGDWPVEETYELARLGLRCSELQRKDRPDLKDQVLPLLLTLKKVADEARNSASKVPAAIPNHFICPILQDVMNDPCVAADGYTYDRRAIEKWLQENDNSPMTMLPLPYKNLIPNYSLLSAIVEWNSRRN 829
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 64096367 64103588 - Hsped.06g13890.1 Hepe06g1389 572764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1389 829 SMART serkin_6 476 738 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g1389 829 ProSiteProfiles U-box domain profile. 758 829 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Hepe06g1389 829 Coils Coil 377 397 - -
Hepe06g1389 829 SMART Ubox_2 762 824 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Hepe06g1389 829 Pfam Protein tyrosine and serine/threonine kinase 481 732 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe06g1389 829 SUPERFAMILY Protein kinase-like (PK-like) 457 732 IPR011009 -
Hepe06g1389 829 CDD RING-Ubox_WDSUB1-like 760 814 - -
Hepe06g1389 829 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 759 829 IPR013083 -
Hepe06g1389 829 SUPERFAMILY RING/U-box 747 827 - -
Hepe06g1389 829 Coils Coil 349 369 - -
Hepe06g1389 829 ProSitePatterns Protein kinases ATP-binding region signature. 482 503 IPR017441 GO:0005524(InterPro)
Hepe06g1389 829 Gene3D Transferase(Phosphotransferase) domain 1 549 758 - -
Hepe06g1389 829 PANTHER OS02G0152300 PROTEIN 33 821 IPR051348 -
Hepe06g1389 829 MobiDBLite consensus disorder prediction 430 452 - -
Hepe06g1389 829 ProSiteProfiles Protein kinase domain profile. 476 738 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g1389 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 594 606 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe06g1389 829 Gene3D Phosphorylase Kinase; domain 1 445 548 - -
Hepe06g1389 829 CDD STK_N 31 194 - -
Hepe06g1389 829 Coils Coil 405 425 - -
Hepe06g1389 829 Pfam U-box domain 759 826 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1389 Hepe-Chr6:64096367 Hepe10g0326 Hepe-Chr10:3479889 5.55e-113 dispersed
Hepe06g1389 Hepe-Chr6:64096367 Hepe08g2676 Hepe-Chr8:68800887 8.66e-120 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72883 PF07714 PK_Tyr_Ser-Thr 4.30E-40 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1389 - - - 0.0