Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe06g1389 | ATGCCACAGATGCCACAAAGTTGCACATTTATGGAGGGGATGGAAGATGAAGCCGATAGAAATCTTATGTTGCTGCCTTCCCCTTCTCCAGTTATAGCAGTTGCTATCAGTGGGAAGAAAAACAGTAAATATATAATTAGGTGGTCATTGGAAAAGTTTCTACCTGAGGGCATCATCAATTTCAAGTTGCTACACTTCATCCCAAGGATTACTAGTGTCCCAACTCCAAATTGCGTATTCAAGCTATATGCCAATGTTGATGCAGTGGGAAATTTAATTCCGGTTTCACAAGTCCGTGAGGATGTTGCTGCGGCTTATAGGAAAGAAATCGGGTGGCAGACGAGTGAAAAGCTTCTTCCATATAAGAAGATGTTTGCTCAGAGAAAGGTTCAACTTGATGTTGTGACTCTTGAAACAGATGATGTGGCAAATGCAATAATAGAAGAGGTTACAAAGTGTTCAATCAGCAAGCTTGTTATAGGAGTTTCATCACAGGGATTTTTCTCAAGGAATAACGGTCTATCCTCAAGAATATCAGCCATTGCACCTAGATATTGTACAGTCTATGCTATTTCAAAAGGAAAATTAGCCTCAATACGACCACCTGATATGGAGACGAACATGAGCATTAAAGATGATGTGAGTGAAGCAAGTTCTGCAAATAGCTACTCAAGCTATTCTTCTAGCTCACTTACAGATGGCAGCTCGAGCTTAATTACATCCTACTCTCATTTCCCTTCTCCTTCCCCTTCCCTACCATTACAACGATTTCAAGCTCTTTCAACCATCAATCAACCTCTTGCAACGAAAACAAGCTCCATTAAATCCAACCATTCTAAATGTCAATCCGTTGATATTGAGGAGCAGGTGGATGGCGTTCGTTCTTCTTCCTATGTTTTAGATTGCGTACAAACATTGAGTCGGGCCTCTAGTTGTAAAAGCGTGCCAACAGATAACCAGTCTTGGGTTTCTAATGAAGCTTCATCCTCGGGCGCGTTCAATGATTATTCTTCATGTGAAAGTCAGGCGGATGTCAACTTTGAGCTTGAAAAGTTGAGAATCGAACTAAGACATGCAAGAGGAATGTATGCAATTGCTCAACGCGAGACGATCGATGCCTCTCGAAAGCTGGGTCATCTGAATAAACAACGATCGGAGGAAGCTAGGAAGCTCGAAGAGATCAACAACAAAGAGGTGGTTGCCAAAGAATTTGTGAGGGAAGAGAGAGTGAAGCGTGAAGCTTTGAGAAGAGAAGCAAAGTATTTAAAAGAACGCGCCGAAAGAGAGGGCATGTATAGGAAGGAAGCAGAGACAAAAGCTCATCAGGATGCCAAAGAGAAGGGAAAGCATGAGAATGCTCTTCAAGGACCTCTTCAGCAATACCAACATTTTCAGTGGGAAGATATTGTTTCGGCCACATCATCTTTCTCTGAGGATCTTAAGATTGGAATGGGAGCAAATGGAACAGTTTATAAGTGCAGTTTGCATCATACAACTGTAGCAGTGAAGGTTCTTCACTCTAGAGATGGTCACAAAAAGATGCAATTTCTTCAGGAGCTCGAAATCTTGAGCAAAATCCATCATCCCCATCTACTACTACTCCTCGGTGCTTGTCCGGATAAGAATTGCCTGGTTTATGAGTACATGGAAAATGGTAGCTTGGAGGATAGGTTGTACCGCAGAGCCAATACACCTGCAATCCCATGGTATGAGCGGTTTCGAATTGCTTGGGAAATAGCCTCTGCTCTTGTCTTTCTTCACAGCTCAAAGCCAAAACCAATAATCCACCGTGATCTTAAGCCAGCGAACATCTTACTTGACCAAAACCTCGTGAGCAAAATCGGCGACGTCGGTCTTTCTACAGTGTTTAGTTCAGACCCTTTAATGTCTACTGCATTCAAGGATAGTGGACCAGTTGGAACTCTCTGTTACATAGATCCCGAGTATCAACGAACCGGATTACTCTCACCTAAGTCTGATGTATATGCTTTTGGAATGGTGATCTTGCAGTTACTAACTGCAAAACCAGCAGTAGCATTAACCCATGTGGTTGAAACAGCCATTGATAACCACACTTTAATAAAGGTTCTAGACATAGAGGCTGGGGATTGGCCCGTCGAAGAGACGTATGAATTGGCGAGATTAGGACTTCGCTGTTCCGAGCTGCAACGTAAAGATAGGCCTGACTTAAAGGATCAAGTACTTCCCTTGTTGCTGACACTGAAAAAGGTTGCTGATGAGGCTCGCAATTCGGCCTCCAAAGTTCCAGCTGCAATTCCTAATCATTTCATCTGTCCAATTCTTCAGGACGTGATGAATGACCCTTGTGTTGCGGCGGATGGATACACATACGACCGTCGGGCAATAGAGAAGTGGCTTCAGGAGAACGATAACTCACCAATGACGATGTTGCCACTGCCCTATAAGAATTTAATACCAAATTACAGTCTTCTCTCTGCAATTGTTGAGTGGAACTCCAGAAGAAACTAA | 2490 | 42.93 | MPQMPQSCTFMEGMEDEADRNLMLLPSPSPVIAVAISGKKNSKYIIRWSLEKFLPEGIINFKLLHFIPRITSVPTPNCVFKLYANVDAVGNLIPVSQVREDVAAAYRKEIGWQTSEKLLPYKKMFAQRKVQLDVVTLETDDVANAIIEEVTKCSISKLVIGVSSQGFFSRNNGLSSRISAIAPRYCTVYAISKGKLASIRPPDMETNMSIKDDVSEASSANSYSSYSSSSLTDGSSSLITSYSHFPSPSPSLPLQRFQALSTINQPLATKTSSIKSNHSKCQSVDIEEQVDGVRSSSYVLDCVQTLSRASSCKSVPTDNQSWVSNEASSSGAFNDYSSCESQADVNFELEKLRIELRHARGMYAIAQRETIDASRKLGHLNKQRSEEARKLEEINNKEVVAKEFVREERVKREALRREAKYLKERAEREGMYRKEAETKAHQDAKEKGKHENALQGPLQQYQHFQWEDIVSATSSFSEDLKIGMGANGTVYKCSLHHTTVAVKVLHSRDGHKKMQFLQELEILSKIHHPHLLLLLGACPDKNCLVYEYMENGSLEDRLYRRANTPAIPWYERFRIAWEIASALVFLHSSKPKPIIHRDLKPANILLDQNLVSKIGDVGLSTVFSSDPLMSTAFKDSGPVGTLCYIDPEYQRTGLLSPKSDVYAFGMVILQLLTAKPAVALTHVVETAIDNHTLIKVLDIEAGDWPVEETYELARLGLRCSELQRKDRPDLKDQVLPLLLTLKKVADEARNSASKVPAAIPNHFICPILQDVMNDPCVAADGYTYDRRAIEKWLQENDNSPMTMLPLPYKNLIPNYSLLSAIVEWNSRRN | 829 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 64096367 | 64103588 | - | Hsped.06g13890.1 | Hepe06g1389 | 572764 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe06g1389 | 829 | SMART | serkin_6 | 476 | 738 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe06g1389 | 829 | ProSiteProfiles | U-box domain profile. | 758 | 829 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Hepe06g1389 | 829 | Coils | Coil | 377 | 397 | - | - | |
Hepe06g1389 | 829 | SMART | Ubox_2 | 762 | 824 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Hepe06g1389 | 829 | Pfam | Protein tyrosine and serine/threonine kinase | 481 | 732 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe06g1389 | 829 | SUPERFAMILY | Protein kinase-like (PK-like) | 457 | 732 | IPR011009 | - | |
Hepe06g1389 | 829 | CDD | RING-Ubox_WDSUB1-like | 760 | 814 | - | - | |
Hepe06g1389 | 829 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 759 | 829 | IPR013083 | - | |
Hepe06g1389 | 829 | SUPERFAMILY | RING/U-box | 747 | 827 | - | - | |
Hepe06g1389 | 829 | Coils | Coil | 349 | 369 | - | - | |
Hepe06g1389 | 829 | ProSitePatterns | Protein kinases ATP-binding region signature. | 482 | 503 | IPR017441 | GO:0005524(InterPro) | |
Hepe06g1389 | 829 | Gene3D | Transferase(Phosphotransferase) domain 1 | 549 | 758 | - | - | |
Hepe06g1389 | 829 | PANTHER | OS02G0152300 PROTEIN | 33 | 821 | IPR051348 | - | |
Hepe06g1389 | 829 | MobiDBLite | consensus disorder prediction | 430 | 452 | - | - | |
Hepe06g1389 | 829 | ProSiteProfiles | Protein kinase domain profile. | 476 | 738 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe06g1389 | 829 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 594 | 606 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe06g1389 | 829 | Gene3D | Phosphorylase Kinase; domain 1 | 445 | 548 | - | - | |
Hepe06g1389 | 829 | CDD | STK_N | 31 | 194 | - | - | |
Hepe06g1389 | 829 | Coils | Coil | 405 | 425 | - | - | |
Hepe06g1389 | 829 | Pfam | U-box domain | 759 | 826 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe06g1389 | Hepe-Chr6:64096367 | Hepe10g0326 | Hepe-Chr10:3479889 | 5.55e-113 | dispersed | |
Hepe06g1389 | Hepe-Chr6:64096367 | Hepe08g2676 | Hepe-Chr8:68800887 | 8.66e-120 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72883 | PF07714 | PK_Tyr_Ser-Thr | 4.30E-40 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe06g1389 | - | - | - | 0.0 |