Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1398 ATGCCGGAATCGGAAAGTGGAACTCCGGCTGTGTCGGCGCCGGCGACTCCGGGGACGCCGGGAGGGCCGCTGTTTTCCGGGCTCCGAGTGGATTCGCTGTCGTACGATCGGAAGTCAATGCCGCGGTGCAAATGCTTCCCCGTGAATGCTCCCACGTGGACCCAATCTCACACGTGCTTCACTGACTTCCCTGCTCCTGATATCTCTCTCACCCGCAAGCTGGGAGCAGAATTTGTTGGAACATTCATCCTGATATTTGCTGCGACGGCAGGACCCATCGTCAACCAAAAGTACAACGGCGTCGAGACTCTGATCGGAAACGCTGCTTGCGCTGGTCTGGCGGTGATGATCGTAATATTGTCGACAGGACACATCTCTGGCGCCCACCTGAACCCGTCACTCACCATTGCCTTCGCCGCTCTCCGCCACTTCCCGTGGGTCCAAGTCCCCGCCTACATTGCCGCCCAAGTCTCCGCCTCCATTTGTGCCTCTTTCGCTCTTAAAGGTGTTTTTCACCCTTTCATGTCTGGCGGTGTCACCGTCCCTTCAGTCAGCACCGGCCAAGCTTTCGCTCTCGAATTCCTGATCACATTCAATCTCTTGTTCGTCGTCACTGCGGTCGCCACCGACACTCGCGCGGTCGGAGAGTTGGCCGGAATCGCAGTCGGAGCTACAGTTATGCTAAACATTCTTGTCGCCGGACCCTCAAGTGGTGGTTCGATGAACCCAGTTCGAACTTTGGGCCCCGCCGTGGCTGCCGGAAATTACCGAGAATTGTGGATCTATCTGGTGGCGCCAACGCTGGGGGCAATCGTCGGCGCCGGAACTTACACCGCCGTGAAGCTGAGAGACGACGAAGTGGACGCTCCGTCGCAGGTTAGGAGCTTCCGTCGCTGA 897 58.19 MPESESGTPAVSAPATPGTPGGPLFSGLRVDSLSYDRKSMPRCKCFPVNAPTWTQSHTCFTDFPAPDISLTRKLGAEFVGTFILIFAATAGPIVNQKYNGVETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWVQVPAYIAAQVSASICASFALKGVFHPFMSGGVTVPSVSTGQAFALEFLITFNLLFVVTAVATDTRAVGELAGIAVGATVMLNILVAGPSSGGSMNPVRTLGPAVAAGNYRELWIYLVAPTLGAIVGAGTYTAVKLRDDEVDAPSQVRSFRR 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 64206685 64213787 + Hsped.06g13980.1 Hepe06g1398 572773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1398 298 Pfam Major intrinsic protein 69 277 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1398 298 Gene3D Glycerol uptake facilitator protein. 57 292 IPR023271 -
Hepe06g1398 298 ProSitePatterns MIP family signature. 129 137 IPR022357 -
Hepe06g1398 298 PRINTS Major intrinsic protein family signature 111 135 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1398 298 PRINTS Major intrinsic protein family signature 148 167 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1398 298 PRINTS Major intrinsic protein family signature 223 245 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1398 298 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1398 298 PRINTS Major intrinsic protein family signature 72 91 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1398 298 PRINTS Major intrinsic protein family signature 192 210 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1398 298 PANTHER AQUAPORIN NIP2-1 67 284 IPR034294 -
Hepe06g1398 298 SUPERFAMILY Aquaporin-like 69 286 IPR023271 -
Hepe06g1398 298 FunFam Aquaporin NIP2-1 60 292 - -
Hepe06g1398 298 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1303 Hepe-Chr2:16542570 Hepe06g1398 Hepe-Chr6:64206685 9.77e-117 dispersed
Hepe05g1525 Hepe-Chr5:64791795 Hepe06g1398 Hepe-Chr6:64206685 1.11e-40 dispersed
Hepe06g0442 Hepe-Chr6:23783290 Hepe06g1398 Hepe-Chr6:64206685 3.69e-68 dispersed
Hepe06g1398 Hepe-Chr6:64206685 Hepe07g0894 Hepe-Chr7:11521466 3.28e-101 dispersed
Hepe06g1398 Hepe-Chr6:64206685 Hepe06g0439 Hepe-Chr6:23712439 1.31e-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1398 K09874 - csv:101212651 555.058