Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1399 ATGGGTTTGCTTCGATTCTTTAGAATCAAGAGGAAATCGAAAGTTGCTGATAAAAAAACCGTTCTTGATGCCCAAATTGAGGGTGGATTGGTTGCTAAGAGGTTTCGGTGGAGTGAGATCGAGGCTTTCACTATGAATTTCTCCACTCTTGTCGGCTCCGGCGGCTTTAGTAATGTTTATCTTGCTCGGACGGCAGCAGGGACGGCGGCGGCGGTTAAGATTTTGGGCGCTAGTGAGCGGCTCAACCGGATGTTCCGGCAGGAATTGGACATTCTTTTGCAGCTCCGCCACCGGAATATTGTCAGTTTCGTTGGCTATTGCGATGAACGAGATGAAGGAGCTTTAGTATTCGAATATGTCCCAAATGGGAACTTACAAGAGAAGCTCCACTGCCGGCCGACGGCGGCGATGACCGCGATGACGGCGGTTCTTCCATGGAAAATCCGGCTGAGCATAGCCTTTCAATTAGCACAAGCAATCGAATACCTCCATGAGAAATGCAGTCTTCAAATCGTTCACGGCGATGTAAAATCTTCAAACATTTTACTCGACGAGCGATTCAATTGCAAACTGTGCGATTTCGGGTCGGCAAAAATGGGATTCTCGTCGGCGGTGACGAATCCGCCGTCGAGTCCCTTCAGAGTGAAGCAATTGATGATGGGATCTCCCGGTTACACAGATCCCCAATATTTACGAACCGGAATCGCCTCAAAGAAGAACGACATTTACAGTTTCGGCGTCGTTCTTTTGGAGCTAGTCACCGGAAAAGAGGCCTTCTGCTCGGAAAAAGGTCAGATTCTGACGTCAATATTAACTCCGGCGAATCGCGACGGCGGAGGAATTAAACCGTCGGCAGTGACGGAACTAGTGGATCCACGGCTACGGGGGGATTTCGACGGTGGAGAAGCCGGAGCGTTGCTCTCAATCGCGGCGGCCTGCATATCGCAGCCGCCGCTGCCGAGGCCGGCGATTGGCGGCGTGCTGCAGATGATGAGGGAGAGGATTGGGAATGTTGGCGACGGGGGTTGGCCGGAGACACGTGGCGGGAAATTATTGGATGCGGGGAGATGGTAA 1074 51.96 MGLLRFFRIKRKSKVADKKTVLDAQIEGGLVAKRFRWSEIEAFTMNFSTLVGSGGFSNVYLARTAAGTAAAVKILGASERLNRMFRQELDILLQLRHRNIVSFVGYCDERDEGALVFEYVPNGNLQEKLHCRPTAAMTAMTAVLPWKIRLSIAFQLAQAIEYLHEKCSLQIVHGDVKSSNILLDERFNCKLCDFGSAKMGFSSAVTNPPSSPFRVKQLMMGSPGYTDPQYLRTGIASKKNDIYSFGVVLLELVTGKEAFCSEKGQILTSILTPANRDGGGIKPSAVTELVDPRLRGDFDGGEAGALLSIAAACISQPPLPRPAIGGVLQMMRERIGNVGDGGWPETRGGKLLDAGRW 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 64221884 64223350 - Hsped.06g13990.1 Hepe06g1399 572774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1399 357 SUPERFAMILY Protein kinase-like (PK-like) 34 331 IPR011009 -
Hepe06g1399 357 ProSiteProfiles Protein kinase domain profile. 45 335 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g1399 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe06g1399 357 Gene3D Transferase(Phosphotransferase) domain 1 120 338 - -
Hepe06g1399 357 SMART serkin_6 45 335 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g1399 357 Gene3D Phosphorylase Kinase; domain 1 8 119 - -
Hepe06g1399 357 PANTHER OS01G0253100 PROTEIN 19 333 - GO:0005886(PANTHER)|GO:0006468(PANTHER)
Hepe06g1399 357 ProSitePatterns Protein kinases ATP-binding region signature. 51 73 IPR017441 GO:0005524(InterPro)
Hepe06g1399 357 Pfam Protein kinase domain 48 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1399 Hepe-Chr6:64221884 Hepe07g0462 Hepe-Chr7:4773982 2.11e-52 dispersed
Hepe06g1399 Hepe-Chr6:64221884 Hepe07g0258 Hepe-Chr7:2488341 2.27e-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72884 PF00069 Pkinase 1.70E-40 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1399 - - - 0.0