Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1407 ATGAGCTCCCTGAATTCCGCTGAAGATTGTCTCGGTTGGGCCGCAAGAGATTCTTCTGGCTTTCTATCTCCTTACAAATTCAGCCGTAGGGTTCCGGGAGATGATGATGTTTCAATTACAATAACACATTGCGGAGTTTGTTATGCAGATGTAATATGGACAAAAAATAAATTTGGAGATGCAAAATATCCTTTGGTGCCTGGACATGAGATTGCAGGAATTGTGAAAAGTGTTGGCTCAAATGTTCAACGATTTAAAGTTGGAGATCATGTTGGGGTAGGAACTTACGTGAATTCTTGCAGACAATGCGAGTATTGTGAAGATGGTCAAGAAATTATTTGCACGAGTGGATCCACTTATACTTTTAATGCAATTGATTTTGACGGTACAATTACAAAGGGAGGATATTCCAACTACATAGTTGTCCATGAGAGATACTGCTACAAAATACCTGACAATTATCCATTAGCTTCAGCTGCTCCTTTGCTTTGCGCTGGAATTACTGTTTATTCTCCGATGATTCGGCATAAGATGAATCAACCTGGTAAATCTCTTGGAGTGATAGGGCTTGGTGGTCTCGGCCACTTGGCGGTGAAGTTTGGGAAGGCTTTTGGACTGAATGTGACGGTTTTTAGCACTAGCATATCCAAGAAAGAAGAAGCCCTGAGCGTTCTTGGAGCAGACAAATTTGTTCTCTCATCTGACAACAAGCAGATCGAGGCCTGTTCCAAGTGCCTCGACTTTATTATCGATTCCGCATCTGGTGATCACCCGTTTGATCCATACATGTCTACGTTGAAGATTGGTGGTGTTATGGTTCTGGTGGGGTTTCCTTCTCAAGTCAAGTTTAGTCCTGCAAGCTTGAATTTGGGTTTGAGAACCATTTCTGGTAGCGTAACTGGTGGCACTAAAGTGACACAAGAAATGATCGATTTCTGTGCTGCTCATGGAATCTATCCGAACATAGAAGTGATTCCAATTCAGTACTCAAATGAAGCGATCGAAAGGGTAATAAAGAACGATGTCAAGTATCGATTTGTAATTGATATCGAAGGCTCACTGAAATAA 1068 41.57 MSSLNSAEDCLGWAARDSSGFLSPYKFSRRVPGDDDVSITITHCGVCYADVIWTKNKFGDAKYPLVPGHEIAGIVKSVGSNVQRFKVGDHVGVGTYVNSCRQCEYCEDGQEIICTSGSTYTFNAIDFDGTITKGGYSNYIVVHERYCYKIPDNYPLASAAPLLCAGITVYSPMIRHKMNQPGKSLGVIGLGGLGHLAVKFGKAFGLNVTVFSTSISKKEEALSVLGADKFVLSSDNKQIEACSKCLDFIIDSASGDHPFDPYMSTLKIGGVMVLVGFPSQVKFSPASLNLGLRTISGSVTGGTKVTQEMIDFCAAHGIYPNIEVIPIQYSNEAIERVIKNDVKYRFVIDIEGSLK 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 64383035 64385886 + Hsped.06g14070.1 Hepe06g1407 572782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1407 355 FunFam Cinnamyl alcohol dehydrogenase 165 320 - -
Hepe06g1407 355 Gene3D - 13 350 - -
Hepe06g1407 355 SMART PKS_ER_names_mod 14 348 IPR020843 GO:0016491(InterPro)
Hepe06g1407 355 FunFam probable cinnamyl alcohol dehydrogenase 13 183 - -
Hepe06g1407 355 Gene3D - 165 320 - -
Hepe06g1407 355 Pfam Alcohol dehydrogenase GroES-like domain 33 152 IPR013154 -
Hepe06g1407 355 Pfam Zinc-binding dehydrogenase 192 314 IPR013149 -
Hepe06g1407 355 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 185 212 IPR029752 -
Hepe06g1407 355 PANTHER ALDEHYDE REDUCTASE 9 351 IPR047109 GO:0016616(PANTHER)|GO:0016616(InterPro)
Hepe06g1407 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Hepe06g1407 355 CDD CAD1 12 349 IPR047109 GO:0016616(InterPro)
Hepe06g1407 355 SUPERFAMILY GroES-like 17 183 IPR011032 -
Hepe06g1407 355 FunFam Putative cinnamyl alcohol dehydrogenase 6 321 350 - -
Hepe06g1407 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1407 Hepe-Chr6:64383035 Hepe10g0740 Hepe-Chr10:11350230 4.72e-125 dispersed
Hepe06g1407 Hepe-Chr6:64383035 HepeContig67g0004 Hepe-ChrContig67:510515 3.10e-128 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1407 K00083 - csv:101211438 657.907