Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1411 ATGAATTTTGGGCTGAATCGACTCCAAAATGCCCAAAATCACCATCTCGACCCGAGAAATAGGCTGGATTTCGTCATGATGGAGCCTGTCGAGGAAGCTAGTTCCGCCGCCGTGGAGTTCGACGGCGGCGGCGGAGGAGAAATTGAAAGGGAACACATGTTCGACAAGGTGGTGACGCCGAGTGACGTCGGGAAATTGAACCGGCTGGTGATTCCAAAGCAACACGCTGAGAGGTTTTTCCCATTAGATTCATCAACCAACGACAAGGGTTTGCTCTTAAACTTCGAAGATCGCAACGGGAAATCATGGCGGTTTCGTTACTCCTACTGGAACAGCAGCCAGAGCTACGTTATGACGAAAGGATGGAGCCGTTTTGTCAAGGAGAAGCGTCTCGATGCCGGCGATATCGTCTCGTTCCAACGTGGTGTTGGTGAAATTGGAAGAGATCACCTTTACATTGACTGGCGGCGCCGCCCTGAACTTCCCATCAACCACCCTCACCACCACCACCACAACATCCGACCAAGCATCGTCGTCCAAGCCGGTGCTACCGCTTGGGGATCGCTAGTGTGGCGGCCACTCGGCGCAGCAGTAGCAGCTGGATACCATCATCCAGCTGCTACAACACCGCGGGACCACGCGCACTTGTCGCGAATAAACAACATCAACAACAACATCAACAACATCATCGACAACAACAATAGCAATGTTAACGCTATGTATGATTGGAATAGAGTTTGTTGTCCGTACGGATCATATGAAAATTCAAGAGCAGAAGAAGAGGGAAGAAGGGTAGCCCCAAGATTAGGGGATTATCATGAGGATGAGCAGCAAGAGTATTGTAGTGGTGGTTCAATGGGGGTGGTCCAAGGAAATTATGAAGAAGATCATCAATTAAAAACAACAAATAGTGAAGAATGTGATACACCAGTCAAGAAATCAAGGCTGAGGCTATTTGGTGTAAACATGGAGATGAATTGCCCAATTTCATCATCTTCTCATGAATTTTGTGACTTATTATTGTCTTCTTCTTCAAATTCAAACCCCAAAACCACCACTCAATTCCAATTGCCTTCTCCTTCTGATCATCATCAAACATGA 1101 47.5 MNFGLNRLQNAQNHHLDPRNRLDFVMMEPVEEASSAAVEFDGGGGGEIEREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSTNDKGLLLNFEDRNGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVGEIGRDHLYIDWRRRPELPINHPHHHHHNIRPSIVVQAGATAWGSLVWRPLGAAVAAGYHHPAATTPRDHAHLSRINNINNNINNIIDNNNSNVNAMYDWNRVCCPYGSYENSRAEEEGRRVAPRLGDYHEDEQQEYCSGGSMGVVQGNYEEDHQLKTTNSEECDTPVKKSRLRLFGVNMEMNCPISSSSHEFCDLLLSSSSNSNPKTTTQFQLPSPSDHHQT 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 64472738 64474390 + Hsped.06g14110.1 Hepe06g1411 572786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1411 366 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 39 323 IPR044800 GO:0003700(InterPro)
Hepe06g1411 366 ProSiteProfiles B3 DNA-binding domain profile. 54 159 IPR003340 GO:0003677(InterPro)
Hepe06g1411 366 Pfam B3 DNA binding domain 54 158 IPR003340 GO:0003677(InterPro)
Hepe06g1411 366 FunFam B3 domain-containing protein 47 170 - -
Hepe06g1411 366 CDD B3_DNA 52 141 IPR003340 GO:0003677(InterPro)
Hepe06g1411 366 Gene3D - 48 172 IPR015300 -
Hepe06g1411 366 MobiDBLite consensus disorder prediction 345 366 - -
Hepe06g1411 366 SMART B3_2 54 159 IPR003340 GO:0003677(InterPro)
Hepe06g1411 366 SUPERFAMILY DNA-binding pseudobarrel domain 51 161 IPR015300 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0743 Hepe-Chr3:19841950 Hepe06g1411 Hepe-Chr6:64472738 2.24e-66 dispersed
Hepe06g1411 Hepe-Chr6:64472738 Hepe07g0751 Hepe-Chr7:9030726 9.28e-69 dispersed
Hepe06g1411 Hepe-Chr6:64472738 Hepe01g1220 Hepe-Chr1:77380913 4.15e-46 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55800 PF02362 B3 8.60E-29 CL0405 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1411 K09287 - csv:101211271 410.994