Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe06g1411 | ATGAATTTTGGGCTGAATCGACTCCAAAATGCCCAAAATCACCATCTCGACCCGAGAAATAGGCTGGATTTCGTCATGATGGAGCCTGTCGAGGAAGCTAGTTCCGCCGCCGTGGAGTTCGACGGCGGCGGCGGAGGAGAAATTGAAAGGGAACACATGTTCGACAAGGTGGTGACGCCGAGTGACGTCGGGAAATTGAACCGGCTGGTGATTCCAAAGCAACACGCTGAGAGGTTTTTCCCATTAGATTCATCAACCAACGACAAGGGTTTGCTCTTAAACTTCGAAGATCGCAACGGGAAATCATGGCGGTTTCGTTACTCCTACTGGAACAGCAGCCAGAGCTACGTTATGACGAAAGGATGGAGCCGTTTTGTCAAGGAGAAGCGTCTCGATGCCGGCGATATCGTCTCGTTCCAACGTGGTGTTGGTGAAATTGGAAGAGATCACCTTTACATTGACTGGCGGCGCCGCCCTGAACTTCCCATCAACCACCCTCACCACCACCACCACAACATCCGACCAAGCATCGTCGTCCAAGCCGGTGCTACCGCTTGGGGATCGCTAGTGTGGCGGCCACTCGGCGCAGCAGTAGCAGCTGGATACCATCATCCAGCTGCTACAACACCGCGGGACCACGCGCACTTGTCGCGAATAAACAACATCAACAACAACATCAACAACATCATCGACAACAACAATAGCAATGTTAACGCTATGTATGATTGGAATAGAGTTTGTTGTCCGTACGGATCATATGAAAATTCAAGAGCAGAAGAAGAGGGAAGAAGGGTAGCCCCAAGATTAGGGGATTATCATGAGGATGAGCAGCAAGAGTATTGTAGTGGTGGTTCAATGGGGGTGGTCCAAGGAAATTATGAAGAAGATCATCAATTAAAAACAACAAATAGTGAAGAATGTGATACACCAGTCAAGAAATCAAGGCTGAGGCTATTTGGTGTAAACATGGAGATGAATTGCCCAATTTCATCATCTTCTCATGAATTTTGTGACTTATTATTGTCTTCTTCTTCAAATTCAAACCCCAAAACCACCACTCAATTCCAATTGCCTTCTCCTTCTGATCATCATCAAACATGA | 1101 | 47.5 | MNFGLNRLQNAQNHHLDPRNRLDFVMMEPVEEASSAAVEFDGGGGGEIEREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSTNDKGLLLNFEDRNGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVGEIGRDHLYIDWRRRPELPINHPHHHHHNIRPSIVVQAGATAWGSLVWRPLGAAVAAGYHHPAATTPRDHAHLSRINNINNNINNIIDNNNSNVNAMYDWNRVCCPYGSYENSRAEEEGRRVAPRLGDYHEDEQQEYCSGGSMGVVQGNYEEDHQLKTTNSEECDTPVKKSRLRLFGVNMEMNCPISSSSHEFCDLLLSSSSNSNPKTTTQFQLPSPSDHHQT | 366 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 64472738 | 64474390 | + | Hsped.06g14110.1 | Hepe06g1411 | 572786 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe06g1411 | 366 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 39 | 323 | IPR044800 | GO:0003700(InterPro) | |
Hepe06g1411 | 366 | ProSiteProfiles | B3 DNA-binding domain profile. | 54 | 159 | IPR003340 | GO:0003677(InterPro) | |
Hepe06g1411 | 366 | Pfam | B3 DNA binding domain | 54 | 158 | IPR003340 | GO:0003677(InterPro) | |
Hepe06g1411 | 366 | FunFam | B3 domain-containing protein | 47 | 170 | - | - | |
Hepe06g1411 | 366 | CDD | B3_DNA | 52 | 141 | IPR003340 | GO:0003677(InterPro) | |
Hepe06g1411 | 366 | Gene3D | - | 48 | 172 | IPR015300 | - | |
Hepe06g1411 | 366 | MobiDBLite | consensus disorder prediction | 345 | 366 | - | - | |
Hepe06g1411 | 366 | SMART | B3_2 | 54 | 159 | IPR003340 | GO:0003677(InterPro) | |
Hepe06g1411 | 366 | SUPERFAMILY | DNA-binding pseudobarrel domain | 51 | 161 | IPR015300 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g0743 | Hepe-Chr3:19841950 | Hepe06g1411 | Hepe-Chr6:64472738 | 2.24e-66 | dispersed | |
Hepe06g1411 | Hepe-Chr6:64472738 | Hepe07g0751 | Hepe-Chr7:9030726 | 9.28e-69 | dispersed | |
Hepe06g1411 | Hepe-Chr6:64472738 | Hepe01g1220 | Hepe-Chr1:77380913 | 4.15e-46 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55800 | PF02362 | B3 | 8.60E-29 | CL0405 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe06g1411 | K09287 | - | csv:101211271 | 410.994 |