Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1447 ATGAGTTGCGGTTCGGATTTGATGTCTGGGAACTCTGAGGCTGATGATCGTGAGATTGTAGAGAAGGATCCGACTGGACGTTATATACGGTACGATGAGATTTTGGGTAAAGGGGCATTCAAGACAGTATACAAAGCATTCGACGAAGTTGGCGGAATCGAAGTTGCTTGGAGCCAAGTGGACATTGAAGATGTTTTGCAGTCACCAGAACAGCTTCAAAGATTATATTCTGAGGTTCATCTGCTAAAGTCACTGAAACATGAAAATATAATCAAGTTCTATAGCTACTGGGTTGATGATAAGAATAAGACTATCAACATGATTACAGAATTGTTCACTTCTGGGAGTTTGAGGCAATATCGAAAGAAGCATAGGAAAGTTGACTTGAAGGCATTCAAGAACTGGGCAAGGCAGATACTGCGAGGTTTAACGTATTTGCACGGTCACAATCCTCCAATTATTCACAGGGATTTGAAATGTGATAATATATTTGTAAATGGAAATACTGGAGAAGTTAAAATTGGAGATCTCGGATTGGCAATTGTCATGCAGCAGCCTACTGCCCGAAGTGTAATTGGCACTCCGGAGTTCATGGCTCCAGAACTTTATGATGAGGACTATAATGAACTTGTTGACATCTATTCTTTTGGCATGTGTATGTTGGAAATTGTGACTTGTGAATACCCATATAATGAGTGCAAAAATTCTGCCCAAATATTCAAGAAAGTTACTTCTGGTATAAAGCCTGCTTCCCTTGGAAAAGTGTTGGACCCTCAAGTAAAGCAGTTCATAGAGAAATGTTTGGTTCCAGCATCCATGAGAGTACCTGCAAGTGAACTCTTGAAAGATCCATTTCTTGCAACTGAAAATCCCAAGGACCATAGTTCTGAACCTTCAAGGTTATTGAATGAGCAGTTCAAATCTATAGTTCCTCCATTGCTAGCTTCTCATCCAATGGACATGGACCATAACAGCAGCAAACTCTCAGGCTCAGTGGCCTCATCTGTCAAAAGCAGTAATGGAATTTCTCACTTTTCAACTATAGAACTTCAGAAGCTCACTGAGAATAATGAATTGATGCTGAAAGGGGACATGACTGATCACAATACGATTTCGTTCCATTTGCGCATTGGTGAACTATCTGGTAAATCTAAGAATATCCATTTTGCCTTCTATCTCGATTCCGATACTGCTTTGGCTATTGCTTTGGAGATGGTTGAACAACTTGAACTGTCAAACGAAGATGCGACTACCATAGCTAAATTGATCGATGAATTAATTGCCAAGTTTGTTCCAAGCTGGAAACCATGTCCAAACTATTGTCACGAACAAAATACTGCAGATAATTCTTCTGAAACTCCAGAGGATAAGACCTTCATTCCTCCATTCTTCTCTGAGCTGGTACTGTCATCTCCCAAGGTGGCTGCTGCTACTGCTAGGAAAACTCCGACGCATTTGGCCGACGTGGAATATCAAGAAATCCAGCAGTCGATTATTTCGTGTGCATCTCTTGACTACAATCACTCAACTGTCTCAGATTACAGCATTGGAAAAGGATCAGAGTGTGGAGACTTCGGCCACCCCGAATGCAACAAACCCTTTACTAGCAGTGGAACAATTGATTTAGATGCTGTTGGATCTATTTCGACGATGATCGATTTTACAAAACCGTCTTTAATCTCGTCCTGTTCGGGAATGTCGAAAGAATTGAGTTTGTCTAGCTTTTCGACTCTTTCTCTGGAAGAAAGAGATCACCATGATGAACTCAAGTTGGAGATTGATGCTATTGACTTGCAGTACCATCAGTGCCTTTGTGAACTGTCAAGAATGAGAGAGGAAGCAATAGAAAGTGCCAAGAAGAGGTGGATGTCAAAGAAGAAAGCCTCTGCTATTTGA 1896 40.98 MSCGSDLMSGNSEADDREIVEKDPTGRYIRYDEILGKGAFKTVYKAFDEVGGIEVAWSQVDIEDVLQSPEQLQRLYSEVHLLKSLKHENIIKFYSYWVDDKNKTINMITELFTSGSLRQYRKKHRKVDLKAFKNWARQILRGLTYLHGHNPPIIHRDLKCDNIFVNGNTGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYDEDYNELVDIYSFGMCMLEIVTCEYPYNECKNSAQIFKKVTSGIKPASLGKVLDPQVKQFIEKCLVPASMRVPASELLKDPFLATENPKDHSSEPSRLLNEQFKSIVPPLLASHPMDMDHNSSKLSGSVASSVKSSNGISHFSTIELQKLTENNELMLKGDMTDHNTISFHLRIGELSGKSKNIHFAFYLDSDTALAIALEMVEQLELSNEDATTIAKLIDELIAKFVPSWKPCPNYCHEQNTADNSSETPEDKTFIPPFFSELVLSSPKVAAATARKTPTHLADVEYQEIQQSIISCASLDYNHSTVSDYSIGKGSECGDFGHPECNKPFTSSGTIDLDAVGSISTMIDFTKPSLISSCSGMSKELSLSSFSTLSLEERDHHDELKLEIDAIDLQYHQCLCELSRMREEAIESAKKRWMSKKKASAI 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 65035686 65039587 - Hsped.06g14470.1 Hepe06g1447 572822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1447 631 FunFam Probable serine/threonine-protein kinase WNK1 14 110 - -
Hepe06g1447 631 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 374 428 IPR024678 GO:0004674(InterPro)|GO:0005524(InterPro)
Hepe06g1447 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe06g1447 631 CDD STKc_WNK 27 286 - -
Hepe06g1447 631 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 15 462 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Hepe06g1447 631 Gene3D Transferase(Phosphotransferase) domain 1 112 293 - -
Hepe06g1447 631 ProSiteProfiles Protein kinase domain profile. 29 286 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g1447 631 Gene3D Phosphorylase Kinase; domain 1 12 110 - -
Hepe06g1447 631 SUPERFAMILY Protein kinase-like (PK-like) 30 329 IPR011009 -
Hepe06g1447 631 Gene3D - 369 469 - -
Hepe06g1447 631 FunFam probable serine/threonine-protein kinase WNK9 112 291 - -
Hepe06g1447 631 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g1447 631 SMART serkin_6 29 286 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g2042 Hepe-Chr5:70950067 Hepe06g1447 Hepe-Chr6:65035686 4.12e-213 dispersed
Hepe06g1447 Hepe-Chr6:65035686 Hepe07g2195 Hepe-Chr7:66352175 1.03e-158 dispersed
Hepe06g1447 Hepe-Chr6:65035686 Hepe03g0197 Hepe-Chr3:2532869 1.30e-146 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72885 PF00069 Pkinase 2.20E-50 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1447 K08867 - csv:101207748 1074.31