Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1450 ATGGATACTGCTCAATGGCCACAGGAGATTGTGGTGAAGCCAATTGAAGAAATTGTGAGAAGCACTTGCCCAAAACCAAGTGTTTCAATTTTAGAGAGGAAAATTAGACCACAAAAGGAACAAGCTTTGAATTGTCCAAGGTGTAATTCAACCAATACCAAGTTTTGTTATTACAATAACTATAGTCTCACACAACCAAGATACTTTTGCAAAACTTGTAGAAGGTATTGGACTGAAGGTGGATCCTTAAGAAACATTCCTGTTGGTGGAGGTTCAAGGAAGAACAAAAGACCTTCTTCTTCTACTCCTCCTCTTCCAAACAAAATTCTTGATCTCCCACAAAACCCTAAAACCACTCATTCTCAAGATCTCAATTTGTCCTTCCCACCACCCTCTCATCATCAAGATCATCATCATTTCACCTCCAATAATCTCTCTCAAATCGTTGTCGGTGGTAACCCGATCGCTACCTCTGGCTCTGCTTCGACGACGATGGCACCGTCGTCGTCGTCGTCGCATCATCAGCTTTCGGCGATGGAGCTTCTCACCGGGATGTCGAGCAATTCTAGGGGTTTGAATTGTTTCATTCCAATGCCGTCTATCGTTCCGGATCCTGGCTCGGTTTACACGACGGGGTTTCCCGATCTCCATGATCAGTTCAAGTCGAGCCTTGGATTCTCACTCGATGGCTACGGCGGCGTCCCGAACGAGGCTAGCAATGGCGGGGGGAGGCTTATGCAGCTGCAATTTGAGGATTTGAAGCAAGGGTCTAATGGAGTTGAGCAAGGGAAAGAGCAAGGAGATTCAACTGGGTATTGGAGTGGGATGTTGGGTGGAGGATCATGGTAA 849 46.05 MDTAQWPQEIVVKPIEEIVRSTCPKPSVSILERKIRPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSTPPLPNKILDLPQNPKTTHSQDLNLSFPPPSHHQDHHHFTSNNLSQIVVGGNPIATSGSASTTMAPSSSSSHHQLSAMELLTGMSSNSRGLNCFIPMPSIVPDPGSVYTTGFPDLHDQFKSSLGFSLDGYGGVPNEASNGGGRLMQLQFEDLKQGSNGVEQGKEQGDSTGYWSGMLGGGSW 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 65065085 65067232 - Hsped.06g14500.1 Hepe06g1450 572825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1450 282 MobiDBLite consensus disorder prediction 84 139 - -
Hepe06g1450 282 ProSiteProfiles Zinc finger Dof-type profile. 43 97 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Hepe06g1450 282 MobiDBLite consensus disorder prediction 151 171 - -
Hepe06g1450 282 Pfam Dof domain, zinc finger 41 97 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Hepe06g1450 282 ProSitePatterns Zinc finger Dof-type signature. 45 81 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Hepe06g1450 282 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 34 173 IPR045174 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe06g1450 282 MobiDBLite consensus disorder prediction 94 129 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g2037 Hepe-Chr5:70899015 Hepe06g1450 Hepe-Chr6:65065085 5.03e-35 dispersed
Hepe06g1450 Hepe-Chr6:65065085 Hepe07g2228 Hepe-Chr7:66682904 8.86e-37 dispersed
Hepe02g2774 Hepe-Chr2:76336509 Hepe06g1450 Hepe-Chr6:65065085 3.38e-32 transposed
Hepe05g0445 Hepe-Chr5:5787606 Hepe06g1450 Hepe-Chr6:65065085 4.71e-38 transposed
Hepe06g0810 Hepe-Chr6:54910939 Hepe06g1450 Hepe-Chr6:65065085 4.27e-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55802 PF02701 zf-Dof 3.90E-33 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1450 - - - 0.0