Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1470 ATGGCTGGCTCCTGGAGAGCTCAAGGATCTCTGATCGTTTTGGCAATCATCTTCTTCGGAGGCCTGTTCGCAAGTTCCATCGCGAAAGAGGAAGCAACGAAATTGGGAACTGTGATTGGGATTGATTTGGGTACAACTTATTCGTGTGTTGGAGTCTACAAGAACGGACATGTAGAAATTATAGCGAACGACCAAGGAAACCGTATCACTCCTTCTTGGGTCGCTTTCAGTGATAGTGAGAGATTGATCGGTGAGGCTGCTAAGAATCAAGCAGCTGTCAATCCTGAAAGGACAGTGTTTGATGTCAAGAGACTTATCGGTAGAAAGTTTGAAGATAAAGAGGTTCAGAAAGACATTAAGTTTTTCCCTTACAAGATTGTTAACAGGGATGGAAAGCCTTACATTCAAGTGAAGATCAAGGATGGTGAGACCAAGGTTTTCAGCCCTGAGGAAGTCAGTGCTATGATTCTTACAAAGATGAAGGAAACAGCCGAAGCATTCCTTGGAAAGAAAATCAAGGACGCCGTCGTCACTGTTCCAGCTTACTTCAACGATGCCCAAAGGCAAGCAACCAAGGATGCCGGTATTATTGCTGGTCTCAACGTTGCTAGAATCATCAATGAGCCCACCGCCGCTGCCATTGCGTACGGTTTGGACAAGAAGGGTGGCGAGAAGAATATTCTCGTATTTGATCTTGGTGGTGGTACTTTTGATGTCAGTATCTTGACCATTGATAATGGTGTTTTTGAGGTTCTTGCCACAAACGGAGACACTCATTTGGGAGGTGAGGACTTTGACCAGAGAATTATGGAATACTTCATCAAATTGATTAAGAAGAAGCACGGAAAGGACATCAGCAAGGACAACAGAGCTCTTGGAAAGCTTAGAAGGGAAAGTGAGCGTGCCAAGAGGGCATTGAGTAGCCAGCATCAGATCCGTGTTGAGATTGAATCACTCTTTGAGGGTACTGACTTCTCCGAGCCATTGACCCGAGCTCGATTCGAGGAGTTGAACAATGACTTGTTCAGAAAGACCATGGGACCAGTGAAGAAGGCCATGGACGATGCAGGTTTGGAGAAGAACCAAATTGACGAGATTGTCCTTGTTGGTGGTAGCACCAGGATTCCCAAAGTTCAACAGCTCCTTAAAGACTACTTTGACGGCAAGGAACCTAACAAGGGTGTGAACCCTGATGAGGCCGTTGCCTATGGTGCTGCTGTTCAAGGAAGCATTTTGAGTGGAGAGGGTGGTGAAGAAACCAAAGATATCCTTCTTCTTGACGTTGCGCCTCTTACCCTCGGAATTGAGACTGTTGGAGGAGTGATGACCAAATTGATCCCCAGAAACACTGTCATCCCAACAAAGAAATCTCAGGTCTTCACCACTTACCAGGATCAACAGACCACCGTCTCCATTCAGGTCTATGAAGGTGAGAGAAGTCTCACTAAGGACTGCAGGAACCTTGGTAAATTCGATCTAACTGGAATTCCTCCAGCACCAAGGTACGTCTCTTGCTCCTGA 1521 46.02 MAGSWRAQGSLIVLAIIFFGGLFASSIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFSDSERLIGEAAKNQAAVNPERTVFDVKRLIGRKFEDKEVQKDIKFFPYKIVNRDGKPYIQVKIKDGETKVFSPEEVSAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRRESERAKRALSSQHQIRVEIESLFEGTDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVYEGERSLTKDCRNLGKFDLTGIPPAPRYVSCS 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 65281023 65283853 + Hsped.06g14700.1 Hepe06g1470 572845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1470 506 SUPERFAMILY Actin-like ATPase domain 223 414 IPR043129 -
Hepe06g1470 506 SUPERFAMILY Actin-like ATPase domain 36 220 IPR043129 -
Hepe06g1470 506 Gene3D Actin; Chain A, domain 4 261 344 - -
Hepe06g1470 506 PANTHER HEAT SHOCK PROTEIN 70KDA 38 502 IPR013126 GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005788(PANTHER)|GO:0016020(PANTHER)|GO:0030433(PANTHER)|GO:0030968(PANTHER)|GO:0034663(PANTHER)|GO:0140662(InterPro)
Hepe06g1470 506 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 418 503 IPR029047 -
Hepe06g1470 506 ProSitePatterns Heat shock hsp70 proteins family signature 3. 366 380 IPR018181 -
Hepe06g1470 506 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 411 505 IPR029047 -
Hepe06g1470 506 FunFam Endoplasmic reticulum chaperone BiP 261 344 - -
Hepe06g1470 506 Gene3D - 39 410 - -
Hepe06g1470 506 FunFam Heat shock 70 kDa protein 337 392 - -
Hepe06g1470 506 ProSitePatterns Heat shock hsp70 proteins family signature 2. 229 242 IPR018181 -
Hepe06g1470 506 ProSitePatterns Heat shock hsp70 proteins family signature 1. 41 48 IPR018181 -
Hepe06g1470 506 Gene3D - 221 395 - -
Hepe06g1470 506 FunFam heat shock 70 kDa protein-like 100 155 - -
Hepe06g1470 506 CDD HSPA5-like_NBD 36 410 IPR042050 -
Hepe06g1470 506 Pfam Hsp70 protein 38 502 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Hepe06g1470 506 FunFam Chaperone protein HscA homolog 227 275 - -
Hepe06g1470 506 PRINTS 70kDa heat shock protein signature 363 379 - -
Hepe06g1470 506 PRINTS 70kDa heat shock protein signature 395 415 - -
Hepe06g1470 506 PRINTS 70kDa heat shock protein signature 175 195 - -
Hepe06g1470 506 PRINTS 70kDa heat shock protein signature 422 441 - -
Hepe06g1470 506 PRINTS 70kDa heat shock protein signature 65 77 - -
Hepe06g1470 506 PRINTS 70kDa heat shock protein signature 87 95 - -
Hepe06g1470 506 PRINTS 70kDa heat shock protein signature 235 245 - -
Hepe06g1470 506 PRINTS 70kDa heat shock protein signature 37 50 - -
Hepe06g1470 506 FunFam Heat shock protein 70 39 226 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1565 Hepe-Chr3:72466701 Hepe06g1470 Hepe-Chr6:65281023 6.47e-70 dispersed
Hepe04g0866 Hepe-Chr4:62915412 Hepe06g1470 Hepe-Chr6:65281023 9.15e-222 dispersed
Hepe06g1470 Hepe-Chr6:65281023 Hepe09g0559 Hepe-Chr9:5284491 4.56e-218 dispersed
Hepe06g1470 Hepe-Chr6:65281023 Hepe02g3024 Hepe-Chr2:79397967 1.59e-219 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1470 K09490 - csv:101207505 959.518