Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1518 ATGGCCGTTGCAACCGCCGCGCCGTACCGGTTTAATTACCCGAGAGAAGTGTTTTGTTCGCCGGCGGCCGGAGCTGATCCACGTCTGGTTTTATCGAAGCGTTATGGGTGGCGGTGCTTTTCGAAACAGAGGTCGAGAAAATTGTTGGGTGTGAAGAAAAATGAGGAAGTTGAAATGGTTGAGGCCGGTTTGACGAAGCTGACTGTGGAGGAGAAAATGGCGAGGAAGAAAGCGGAAAGAGATGCTTATTTAGTTGCTGCAATTGTTTCCAGCTTTGGGATCACGTCAATGGCTGCCATCGCTGTTTATTACAGATTCTCTTGGCAAATGGGGGGTGGAGAGTTTCCAGTTTTGGAAATGTTTTGCACTTTCGCACTCTCTGTCGGCGCTGCTGTGGGAATGGAATTCTGGGCAAGATGGGCTCACAAAGACCTGTGGCATGCTTCCTTATGGGATATGCACCAGTCTCATCACAAGCCGAGGGATGGAGCGTTTGAAATGAACGATGTGTTTGCAATTATCAACGCAGTTCCTGCTATTGCTCTTCTTTCTTTTGGCTTCTTCAATAAAGGCTTTTTTCCAGGGCTCTGTTTTGGTGCTGGTTTGGGAATTACGGTGTTTGGGATGGCCTACATGTTCGTCCACGATGGCCTCGTGCACCGTCGTTTCCCAGTGGGTCCCATAGCCGCGGTCCCCTACTTACGACGTGTCGCTGCTGCCCATCATCTTCATCATACGGACAAATTCGACGGAGTCCCGTACGGCTTGTTTTTAGGACCCAAGGAATTGGAAGAAGTGGATGGCGAGGAAGAGTTACAGAAGGAAATTAAAAAGAGAAACAAGGTTTACAGAAGTTAA 858 48.83 MAVATAAPYRFNYPREVFCSPAAGADPRLVLSKRYGWRCFSKQRSRKLLGVKKNEEVEMVEAGLTKLTVEEKMARKKAERDAYLVAAIVSSFGITSMAAIAVYYRFSWQMGGGEFPVLEMFCTFALSVGAAVGMEFWARWAHKDLWHASLWDMHQSHHKPRDGAFEMNDVFAIINAVPAIALLSFGFFNKGFFPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIAAVPYLRRVAAAHHLHHTDKFDGVPYGLFLGPKELEEVDGEEELQKEIKKRNKVYRS 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 65839275 65841509 + Hsped.06g15180.1 Hepe06g1518 572893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1518 285 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 50 283 IPR045019 GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016119(PANTHER)|GO:0016123(PANTHER)|GO:0016491(InterPro)
Hepe06g1518 285 Pfam Fatty acid hydroxylase 130 257 IPR006694 GO:0005506(InterPro)|GO:0008610(InterPro)|GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1518 Hepe-Chr6:65839275 Hepe07g0127 Hepe-Chr7:1146472 3.68e-123 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1518 K15746 - csv:101214325 429.869