Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe06g1518 | ATGGCCGTTGCAACCGCCGCGCCGTACCGGTTTAATTACCCGAGAGAAGTGTTTTGTTCGCCGGCGGCCGGAGCTGATCCACGTCTGGTTTTATCGAAGCGTTATGGGTGGCGGTGCTTTTCGAAACAGAGGTCGAGAAAATTGTTGGGTGTGAAGAAAAATGAGGAAGTTGAAATGGTTGAGGCCGGTTTGACGAAGCTGACTGTGGAGGAGAAAATGGCGAGGAAGAAAGCGGAAAGAGATGCTTATTTAGTTGCTGCAATTGTTTCCAGCTTTGGGATCACGTCAATGGCTGCCATCGCTGTTTATTACAGATTCTCTTGGCAAATGGGGGGTGGAGAGTTTCCAGTTTTGGAAATGTTTTGCACTTTCGCACTCTCTGTCGGCGCTGCTGTGGGAATGGAATTCTGGGCAAGATGGGCTCACAAAGACCTGTGGCATGCTTCCTTATGGGATATGCACCAGTCTCATCACAAGCCGAGGGATGGAGCGTTTGAAATGAACGATGTGTTTGCAATTATCAACGCAGTTCCTGCTATTGCTCTTCTTTCTTTTGGCTTCTTCAATAAAGGCTTTTTTCCAGGGCTCTGTTTTGGTGCTGGTTTGGGAATTACGGTGTTTGGGATGGCCTACATGTTCGTCCACGATGGCCTCGTGCACCGTCGTTTCCCAGTGGGTCCCATAGCCGCGGTCCCCTACTTACGACGTGTCGCTGCTGCCCATCATCTTCATCATACGGACAAATTCGACGGAGTCCCGTACGGCTTGTTTTTAGGACCCAAGGAATTGGAAGAAGTGGATGGCGAGGAAGAGTTACAGAAGGAAATTAAAAAGAGAAACAAGGTTTACAGAAGTTAA | 858 | 48.83 | MAVATAAPYRFNYPREVFCSPAAGADPRLVLSKRYGWRCFSKQRSRKLLGVKKNEEVEMVEAGLTKLTVEEKMARKKAERDAYLVAAIVSSFGITSMAAIAVYYRFSWQMGGGEFPVLEMFCTFALSVGAAVGMEFWARWAHKDLWHASLWDMHQSHHKPRDGAFEMNDVFAIINAVPAIALLSFGFFNKGFFPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIAAVPYLRRVAAAHHLHHTDKFDGVPYGLFLGPKELEEVDGEEELQKEIKKRNKVYRS | 285 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 65839275 | 65841509 | + | Hsped.06g15180.1 | Hepe06g1518 | 572893 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe06g1518 | 285 | PANTHER | BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC | 50 | 283 | IPR045019 | GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016119(PANTHER)|GO:0016123(PANTHER)|GO:0016491(InterPro) | |
Hepe06g1518 | 285 | Pfam | Fatty acid hydroxylase | 130 | 257 | IPR006694 | GO:0005506(InterPro)|GO:0008610(InterPro)|GO:0016491(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe06g1518 | Hepe-Chr6:65839275 | Hepe07g0127 | Hepe-Chr7:1146472 | 3.68e-123 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe06g1518 | K15746 | - | csv:101214325 | 429.869 |