Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1536 ATGGAGGGGAAAGAAGAGGACGTGAAGCTAGGAGCGAACAAGTATTCAGAACGACAGCCAATCGGCACATCGGCGCAGACGGACAAGGACTACAAGGAGCCACCGCCGGCGCCGCTCTTCGAACCCGGCGAGCTCTCCTCATGGTCCTTCTACAGAGCCGGAATCGCCGAGTTTGTCGCTACTTTCTTGTTCCTCTACATCACCATCTTGACCGTCATGGGAGTTAGCCGATCGCCGTCGAAATGCTCCACCGTCGGCATTCAGGGCATCGCTTGGGCCTTCGGCGGCATGATCTTCGCCCTCGTTTACTGCACCGCCGGCATCTCCGGTGGACACATTAATCCGGCGGTGACATTCGGGCTGTTCTTGGCGAGAAAGCTGTCGCTCACCAGAGCCATATTCTACATCATAATGCAGTGCCTAGGCGCCATCTGCGGCGCCGGTGTCGTGAAGGGCTTCGAGAAGTCTATCTACGAGCAGAAGCTCGGTGGCGCCAACTTCGTCGCCTCTGGCTACACCAAGGGCAGCGGCCTCGGTGCCGAGATCGTCGGCACCTTCGTGCTCGTCTACACTGTTTTCTCTGCCACCGATGCCAAGAGAAATGCCAGAGATTCTCACGTCCCAATTTTGGCTCCTCTTCCCATTGGATTTGCAGTGTTTTTGGTTCATTTGGCCACCATTCCGATCACCGGCACCGGCATTAATCCGGCCAGAAGTCTTGGAGCTGCAATCATCTACAACAGGCAACACGCTTGGGATGACCATTGGATCTTCTGGGTGGGACCATTCATTGGAGCTGCTCTTGCTGCTATTTACCACCAGATCATCATCAGAGCCATTCCATTCAAGGCCAGAGCTTGA 861 55.63 MEGKEEDVKLGANKYSERQPIGTSAQTDKDYKEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITILTVMGVSRSPSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFEKSIYEQKLGGANFVASGYTKGSGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRQHAWDDHWIFWVGPFIGAALAAIYHQIIIRAIPFKARA 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 66057199 66058837 - Hsped.06g15360.1 Hepe06g1536 572911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1536 286 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 5 282 IPR034294 GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0009414(PANTHER)|GO:0009506(PANTHER)|GO:0015250(PANTHER)
Hepe06g1536 286 FunFam Probable aquaporin PIP1-2 37 286 - -
Hepe06g1536 286 ProSitePatterns MIP family signature. 112 120 IPR022357 -
Hepe06g1536 286 NCBIfam MIP family channel protein 56 272 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1536 286 PRINTS Major intrinsic protein family signature 131 150 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1536 286 PRINTS Major intrinsic protein family signature 256 276 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1536 286 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1536 286 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1536 286 PRINTS Major intrinsic protein family signature 216 238 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1536 286 PRINTS Major intrinsic protein family signature 180 198 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1536 286 Pfam Major intrinsic protein 44 273 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1536 286 MobiDBLite consensus disorder prediction 1 34 - -
Hepe06g1536 286 SUPERFAMILY Aquaporin-like 45 278 IPR023271 -
Hepe06g1536 286 CDD MIP 52 276 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1536 286 Gene3D Glycerol uptake facilitator protein. 37 284 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0731 Hepe-Chr1:70307661 Hepe06g1536 Hepe-Chr6:66057199 3.32e-155 dispersed
Hepe05g0100 Hepe-Chr5:1167061 Hepe06g1536 Hepe-Chr6:66057199 5.07e-37 dispersed
Hepe06g1536 Hepe-Chr6:66057199 Hepe08g0886 Hepe-Chr8:8024237 1.82e-142 dispersed
Hepe06g1536 Hepe-Chr6:66057199 Hepe01g0730 Hepe-Chr1:70284768 9.54e-179 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1536 K09872 - csv:101217440 553.132