Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1554 ATGCAAATAAAAAGGAGAGAAAGTGCTTCAACTTTCAGAACTTTTCATTTCAATCGAATCACCGCCGCAGTTCGGATCAAAATGTTGAAGTTGCCGCGGCGGAAACGGTCGCCGGCGGCAACGGCAGCGGAGGCGAGATCGACGGCAGCGAAGGCGGTTGTGTGTGTTTCCGGGATGACTTGCTCTGCTTGCGGTGTTTCAGTTGAGAATTCCATCAAACAGCTTCCAGGCATTCTCGATGCCGCCGTCGATTTCTTGAACGATAGGGCACAAATCCGGTATCTCCCCAATCTCATCGACGAAGAGTCCATACTTAAAGCAATTGAAAATGCTGGATTTCAAGCTACAATATCGAACGACGGGACCGATCATCGATCCAGAGAAGTATGTCGAATCCGAGTACATGGGATGGGCTGCACTTCTTGCTCTTCCATGGTAGAGTCAGTTTTGGAAGAAATGTATGGAGTACAAAAGGCTCACATTGCTCTATTGAAAGAGGAAGCAGAAATTCTCTATGATCCAAAGGTTGTTAACTCCACTCAGTTCATTATAGCCATACAAGATATTGGATTTGAACCCTTACTTATAACCATTGGTGAACACATTAGCAAAATTGAGCTCAAAATCGATGGTATGCATGACGAAAACTCAACGACAAAAGTTAAAGAATCGCTCGAATCTGTCCCGGGAATTGAAGATGTTGATATCGATATCGATATCACATTGAGCAAAGTTACCATATCTTATAGGCCTGATATAACAGGACCTAGAACATTCATTGAGGTCATCGAGTCGATCAAATCCGAGCATTTCAAGGCGACGATATATCCCGAAGAAGGGGGACGAGAAACTCGAAAGGAGAAAGAAATTAAACAGCACTATAAGTATCTTTTGTGGAGCTCTGCTCTTTCTATACCTGTTTTCTTAACATCCATGGTCTTCATGTATATACCTGGAATCAAGAACACTTTAGATATCAAAGTAGTCAATATGATGAACGTCGGACATATAATCAGGTGGAATTTGTCGACTCCGGTGCAGTTCATCATAGGTTTGAGATTCTATGTCGGATCGTACAAAGCGTTGCGGCGTGGTTCTGCCAACATGGATGTTTTGATTACTTTGGGAACAAATGCAGCTTATTTCTATTCTGTCTATATAGTGTTGAGAGCAGCTACATCCCCTGATTTCAATGGAACAGATTTCTTTGAGACAAGTTCAATGTTGATTACATTCATTCTACTTGGGAAGTATTTGGAGGTTTTAGCAAAAGGGAGGACCTCTGAGGCAATTGCCAAGCTCAAGCACTTGGCGCCTGAGACGGCGACGCTCTTGACGCTAGATGGCCATGGAAATGTGATTGGCGAAGTGGAAATCGGTAGTGAGTTGATTCAAAAGAATGATGTTATTAAGATTACACCGGGCGCGAAAGTAGCTTCCGATGGTCACGTCGTATGGGGCGAAAGTCATGTCAATGAGAGTATGATCACCGGAGAAGCGAAACCGGTTGCAAAAAGGACGGGTGACAAGGTGATAGGAGGAACTGTGAATGAGAATGGAGTATTGCATATAAAGGCAACACATGTCGGATCGGAGAGTTCTTTAGCGCAAATCGTTCGACTCGTCGAATCGTCGCAGTTGGCAAAAGCTCCTATTCAGAAATTTGCAGACCATATCTCCAAGTACTTTGTGCCTTTGGTAATTTTACTCTCATTTCTCACTTGGATTGCTTGGTTTTTAGCTGGAAAGTTGCATCTCTATCCTAAGTCTTGGTTACCTTCTTCAATGGACAGTTTTGAGCTTGCTCTCCAATTTGGGATTTCTGTTATGGTCATAGCTTGCCCTTGTGCCCTCGGCCTCGCCACCCCGACCGCCGTGATGGTCGGTACCGGTGTTGGTGCATCTCAAGGTGTACTAATCAAAGGCGGTCAAGCATTGGAATTTGCACATAAGGTGAGCTGCATTGTGTTTGATAAGACAGGAACTCTAACAGTTGGAAAGCCAGTGGTTGTAAATGTAAAACTTATGAACACTACAGTACTTGAAGAACTGCTTGAACTCACTGCTGCAACTGAGGTGAACAGCGAGCATCCAGTAGCCAAAGCCATTGTTGAATATGCCAAGCAATGCAAGGAAGAACAGAACCCCATTTGGCCAGAAGCTCAAGAATTCATATCCATTCCTGGCCATGGAGTAGAAGCCACAGTAAGAAACAGGAAAATAATGGTTGGAAACAAGAGCATGATGATGAACAATGACATAGAAATCCCAGGGGACGCGGAAAGCTTCCTCGTCGACGCAGAAGGTATGGCACAAACTGCGGTTTTGGTGGCCATAGATCGGACAGTGTCGGGAGTTATCGCGGTGTCGGATCCATTGAAACCGGGTGCCAAAGAAGTCATCTCCATTCTCAAGTCTATGGAAGTGAAGAGCATCATGGTAACAGGTGACAATTGGGGCACTGCAAATTCCATTGCCAAAGAAGTTGGAATTGAAACAGTCATTGCTGAGGCCAAGCCTCAGCAGAAAGCAGAGGAAGTGAAGAATCTTCAGACGGCGGGACACACGGTGGCGATGGTGGGAGACGGGATAAACGACTCGCCTGCCCTTGTCGCAGCCGATGTCGGAATGGCGATCGGAGCTGGCACAGACATTGCCATTGAGGCAGCAGACATTGTTCTAATGAAAAATGACTTGCAAGATGTTATAACAGCCATTCATCTTTCAAGAAAAACATTTGCTCGAATTCGACTGAATTACATTTGGGCTCTTGGTTATAATCTTCTCGCCATACCGATCGCCGCAGGCGTCCTGTTCCCTTCGACTCGGTTTCGGCTACCGCCGTGGATCGCCGGGGCCGCCATGGCAGCTTCTTCTGTTAGTGTGGTATGTAGTTCATTGATGTTGAAGAAGTATCAAAGACCTAAGAAGCTTGATGAAGTTGAGATTCAGATGAATGGAATAGTGGTTGAATGA 2976 45.16 MQIKRRESASTFRTFHFNRITAAVRIKMLKLPRRKRSPAATAAEARSTAAKAVVCVSGMTCSACGVSVENSIKQLPGILDAAVDFLNDRAQIRYLPNLIDEESILKAIENAGFQATISNDGTDHRSREVCRIRVHGMGCTSCSSMVESVLEEMYGVQKAHIALLKEEAEILYDPKVVNSTQFIIAIQDIGFEPLLITIGEHISKIELKIDGMHDENSTTKVKESLESVPGIEDVDIDIDITLSKVTISYRPDITGPRTFIEVIESIKSEHFKATIYPEEGGRETRKEKEIKQHYKYLLWSSALSIPVFLTSMVFMYIPGIKNTLDIKVVNMMNVGHIIRWNLSTPVQFIIGLRFYVGSYKALRRGSANMDVLITLGTNAAYFYSVYIVLRAATSPDFNGTDFFETSSMLITFILLGKYLEVLAKGRTSEAIAKLKHLAPETATLLTLDGHGNVIGEVEIGSELIQKNDVIKITPGAKVASDGHVVWGESHVNESMITGEAKPVAKRTGDKVIGGTVNENGVLHIKATHVGSESSLAQIVRLVESSQLAKAPIQKFADHISKYFVPLVILLSFLTWIAWFLAGKLHLYPKSWLPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALEFAHKVSCIVFDKTGTLTVGKPVVVNVKLMNTTVLEELLELTAATEVNSEHPVAKAIVEYAKQCKEEQNPIWPEAQEFISIPGHGVEATVRNRKIMVGNKSMMMNNDIEIPGDAESFLVDAEGMAQTAVLVAIDRTVSGVIAVSDPLKPGAKEVISILKSMEVKSIMVTGDNWGTANSIAKEVGIETVIAEAKPQQKAEEVKNLQTAGHTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKNDLQDVITAIHLSRKTFARIRLNYIWALGYNLLAIPIAAGVLFPSTRFRLPPWIAGAAMAASSVSVVCSSLMLKKYQRPKKLDEVEIQMNGIVVE 991
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 66245480 66253176 - Hsped.06g15540.1 Hepe06g1554 572929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1554 991 ProSiteProfiles Heavy-metal-associated domain profile. 50 116 IPR006121 GO:0046872(InterPro)
Hepe06g1554 991 SFLD p-type atpase 638 912 IPR044492 -
Hepe06g1554 991 SUPERFAMILY Calcium ATPase, transmembrane domain M 399 939 IPR023298 -
Hepe06g1554 991 ProSiteProfiles Heavy-metal-associated domain profile. 203 271 IPR006121 GO:0046872(InterPro)
Hepe06g1554 991 FunFam Copper-transporting ATPase HMA5 49 120 - -
Hepe06g1554 991 SUPERFAMILY HMA, heavy metal-associated domain 198 267 IPR036163 GO:0046872(InterPro)
Hepe06g1554 991 SUPERFAMILY HAD-like 655 966 IPR036412 -
Hepe06g1554 991 ProSiteProfiles Heavy-metal-associated domain profile. 128 194 IPR006121 GO:0046872(InterPro)
Hepe06g1554 991 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 31 984 - -
Hepe06g1554 991 Gene3D - 623 917 IPR023214 -
Hepe06g1554 991 PRINTS P-type cation-transporting ATPase superfamily signature 807 817 - -
Hepe06g1554 991 PRINTS P-type cation-transporting ATPase superfamily signature 883 895 - -
Hepe06g1554 991 PRINTS P-type cation-transporting ATPase superfamily signature 656 670 - -
Hepe06g1554 991 PRINTS P-type cation-transporting ATPase superfamily signature 860 879 - -
Hepe06g1554 991 PRINTS P-type cation-transporting ATPase superfamily signature 492 506 - -
Hepe06g1554 991 PRINTS P-type cation-transporting ATPase superfamily signature 785 796 - -
Hepe06g1554 991 Gene3D - 204 275 - -
Hepe06g1554 991 ProSitePatterns E1-E2 ATPases phosphorylation site. 658 664 IPR018303 -
Hepe06g1554 991 SFLD C1.7: P-type atpase like 638 912 - -
Hepe06g1554 991 FunFam Probable copper-transporting ATPase HMA5 763 917 - -
Hepe06g1554 991 CDD HMA 132 193 IPR006121 GO:0046872(InterPro)
Hepe06g1554 991 Pfam Heavy-metal-associated domain 132 192 IPR006121 GO:0046872(InterPro)
Hepe06g1554 991 Pfam Heavy-metal-associated domain 207 267 IPR006121 GO:0046872(InterPro)
Hepe06g1554 991 Pfam Heavy-metal-associated domain 55 113 IPR006121 GO:0046872(InterPro)
Hepe06g1554 991 Gene3D - 49 118 - -
Hepe06g1554 991 Gene3D - 126 198 - -
Hepe06g1554 991 ProSitePatterns Heavy-metal-associated domain. 56 85 IPR017969 GO:0046872(InterPro)
Hepe06g1554 991 FunFam ATPase copper transporting beta 124 197 - -
Hepe06g1554 991 FunFam Copper-transporting ATPase 1, putative 424 546 - -
Hepe06g1554 991 ProSitePatterns Heavy-metal-associated domain. 134 164 IPR017969 GO:0046872(InterPro)
Hepe06g1554 991 Pfam E1-E2 ATPase 437 634 - -
Hepe06g1554 991 SUPERFAMILY Calcium ATPase, transduction domain A 456 542 IPR008250 -
Hepe06g1554 991 Pfam haloacid dehalogenase-like hydrolase 653 874 - -
Hepe06g1554 991 SUPERFAMILY HMA, heavy metal-associated domain 50 120 IPR036163 GO:0046872(InterPro)
Hepe06g1554 991 CDD P-type_ATPase_Cu-like 297 956 - -
Hepe06g1554 991 Gene3D - 424 546 - -
Hepe06g1554 991 NCBIfam HAD-IC family P-type ATPase 409 942 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe06g1554 991 NCBIfam heavy metal translocating P-type ATPase 369 969 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Hepe06g1554 991 Gene3D - 663 740 IPR023299 GO:0000166(InterPro)
Hepe06g1554 991 Gene3D - 741 791 IPR023299 GO:0000166(InterPro)
Hepe06g1554 991 CDD HMA 56 116 IPR006121 GO:0046872(InterPro)
Hepe06g1554 991 SUPERFAMILY HMA, heavy metal-associated domain 128 198 IPR036163 GO:0046872(InterPro)
Hepe06g1554 991 PRINTS Copper-transporting ATPase 1 signature 152 173 - -
Hepe06g1554 991 PRINTS Copper-transporting ATPase 1 signature 51 76 - -
Hepe06g1554 991 PRINTS Copper-transporting ATPase 1 signature 106 126 - -
Hepe06g1554 991 PRINTS Copper-transporting ATPase 1 signature 77 100 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0602 Hepe-Chr4:59029974 Hepe06g1554 Hepe-Chr6:66245480 0.0 dispersed
Hepe04g2090 Hepe-Chr4:75723278 Hepe06g1554 Hepe-Chr6:66245480 7.18e-279 dispersed
Hepe06g1554 Hepe-Chr6:66245480 Hepe10g1434 Hepe-Chr10:51031666 3.04e-294 dispersed
Hepe06g1554 Hepe-Chr6:66245480 Hepe07g0336 Hepe-Chr7:3365476 1.06e-119 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1554 K17686 - csv:101220448 1670.6