Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1584 ATGGCTTCTTCAACAACTTCTTCTTCAGCAATCAAGAAGCATTCTATGTATAGAGGAATCCGGTGCCGGAGCGGCAAATGGGTGTCGGAGATTCGGGAGCCACGTAAGACGACGCGCATATGGCTCGGCACATTTCCGACTCCTGAGATGGCCGCTGCTGCTTACGACGTCGCCGCTCTCGCCCTCCGAGGTGGTGACGCCGTCCTCAACTTCCCCTCCTCCATTGCTTCCTACCCTGTTCCCGCCTCGACCTCCCCGGTCGACATACGCACCGCTGCCTCCTCTGCTGCTGCCGCCAATGCGCCGAAAAAAGATGTGGTAGCTTGTAGTAATACTAACATTGGAGATTCAAGTACAGCAATCGGCACTACGAAAGATAGTAGCAATACGACCTCGTTGGGGATGGAGAAGTTTATGGATGAGGAGGAGATTTTTGGGATGCCGAGTTTGTTAGCCGACATGGCGGAGGGGATGATGGTGTCGCCGCCGAGAATGAACTCGCCGCCGCTGTCCGATGACTCGATGGAAAATTCTGATGGAACGGAAAGTTTATGGAGCTACTTATTATGA 570 53.51 MASSTTSSSAIKKHSMYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVAALALRGGDAVLNFPSSIASYPVPASTSPVDIRTAASSAAAANAPKKDVVACSNTNIGDSSTAIGTTKDSSNTTSLGMEKFMDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDSMENSDGTESLWSYLL 189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 66597853 66598659 + Hsped.06g15840.1 Hepe06g1584 572959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1584 189 SMART rav1_2 16 78 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe06g1584 189 FunFam Ethylene-responsive transcription factor 2 15 73 - -
Hepe06g1584 189 SUPERFAMILY DNA-binding domain 15 74 IPR016177 GO:0003677(InterPro)
Hepe06g1584 189 ProSiteProfiles AP2/ERF domain profile. 16 72 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe06g1584 189 MobiDBLite consensus disorder prediction 162 182 - -
Hepe06g1584 189 CDD AP2 15 74 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe06g1584 189 Gene3D AP2/ERF domain 16 74 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe06g1584 189 Pfam AP2 domain 17 64 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe06g1584 189 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 12 187 IPR045277 GO:0003700(InterPro)
Hepe06g1584 189 MobiDBLite consensus disorder prediction 167 182 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0346 Hepe-Chr5:4242945 Hepe06g1584 Hepe-Chr6:66597853 4.97e-47 dispersed
Hepe06g1584 Hepe-Chr6:66597853 Hepe07g0192 Hepe-Chr7:1719533 3.27e-36 dispersed
Hepe06g1584 Hepe-Chr6:66597853 Hepe06g1585 Hepe-Chr6:66641665 1.41e-29 tandem
Hepe06g1228 Hepe-Chr6:61983972 Hepe06g1584 Hepe-Chr6:66597853 9.09e-65 transposed
Hepe06g1584 Hepe-Chr6:66597853 Hepe07g0191 Hepe-Chr7:1706803 3.03e-52 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55813 PF00847 AP2 7.20E-11 CL0081 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1584 - - - 0.0