Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1605 ATGATTCTAATTTTGCCTTCTCTTTTTCTCCTTCTCTTGCTCAACTTTCATGGCTATGAGGCTCAAGTAACTGAGCTTCCATTGACCAATAATCTTCAAACTTACATTGTCCATGTGAAGAAACCAGAGATGGTAGATGATCTCGAGAACTGGCATAGATCATTCTTACCGGAAACGATTGCGACCTCGAATGAACAATCGCAATCGCGCTTACTTTATTCATATAGAAATGTGATGAGTGGTTTTGCTGCAAGGCTTACTGAAGAAGAAGTGAGAGCAATGGAAGAAAAAGATGGTTTTGTGTCAGCAAGGCGTGAAAGGATATTGCATTTGCACACAACTCGCACACCTCATTTTCTAGGATTGAATCGCCAATTTGGGTTTTGGAAAGATTCGAACTTTGGAAAGGGAGTGATCATTGGAGTTTTGGATGGTGGAATTACGCCAAGTCATCCTTCATTTAATGACGTGGGAATGCCACATCCGCCAGCCAAATGGAAAGGAAGATGTGAATTCAATTTCTCAGCTTGTAACAACAAGCTTATAGGTGCGAGATCTTTTAATCTCGCAACAAAAGCCTTAAAGGGCGATGCCGATGACTCTCCTATTGATGTAGATGGCCACGGGACTCACACGGCGAGCACCGCTGCCGGTACTTTCGTCGATGACGCTGAGGCATTGGGAAACGCAAAAGGCACGGCGGTTGGGATGGCGCCTTTAGCTCACCTTGCCATTTACAAAGTATGCTTTGGAGAAGATTGCCCTGACACCGACATTCTCGCAGCGCTCGATGCCGCCGTGGAAGACGGCGTCGATGTGCTCTCGCTCTCGCTCGGGGGCGAATCGCTTCCCTTCTTCAAAGACGTTCTCGCCATAGGCGCATTCGCAGCCGTTCAAAAGGGGATTTTTGTGAGTTGCTCAGCTGCTAATGCAGGCCCTTTTAATGCCACATTGTCGAACGAAGCGCCATGGATTCTAACGGTTGCAGCTAGTACTATTGATCGAAAAATTGTAGCCGTTACAAAGCTTGGAAATGGAGAGGAATTTGATGGCGAATCTCTCTTTCAACCAAATGATTTCCCACCAAATTTCCTCCCTCTTGTATACGCGGGTGAGAAAAATCAAACCGCCGCTTTATGTGGAGAAGGATCATTAAAAGACATCGACGTGAAAGGAAAAATTGTAGTATGCGAAAGAGGAGGAGGAATTGGAAGAATTGACAAAGGTGTAGAAGTAAAAAACGCCGGTGGCAGCGCGATGATCCTCATAAACCTACAAGCAGATGGATTCTCTACCGAAGTCGACGCTCACGTGCTTCCGGCAAGCCACGTGAGCAACACGGCGGGGGTGAAAATTAAATCATACATTAACTCAACAACATACCCAATAGCCACAATTCTCTTCAAAGGAACCATAATTGGCGATGAAAATTCTCCATCCATAGCTTCATTTTCCTCTCGTGGGCCAAGCCGTCCAAGCCCGGGAATTTTGAAACCAGACATAACTGGTCCCGGCGTCAGCATATTAGCTGCATGGCCATTTCCATTAGACAACAACACAAACACAAAATCAACAACATTCAACGTAATTTCAGGAACATCAATGTCGTGTCCTCATCTAAGTGGAATTGCAGCTCTAATCAAAAGCTCTCATCCCAGTTGGTCACCCGCCGCCATTAAATCCGCCATAATGACAACCGCCAACACAACAAATCTCAACGGACAACCAATTCTCGACCAAAATTTACAACCGGCGGATTTCTTCGCAATCGGCGCCGGCCACGTCAACCCAACAAAAACAGCTGACCCAGGATTAATTTACGACATCCAACCCGATGATTACATTCCCTATCTTTGTGGATTGGGATACAAAAATAACCAAGTTTCAATCATTGCACATAAACCAATTGATTGTTTAGCAAAACCAAGCATTCCAGAAGGAGAGCTCAATTATCCGTCGTTTACCGTCGTGTTAGGACCGCCGCAAATACTTTCAAGAACAGTGACGAATGTCGGCGGTGGACGTGAAGTTTACACCGCCGTCGTCGAAGCACCACCGGGGGTTTCTGTTACGGTCCGACCGAGGAAAATAATCTTCTCGGCAGTGAACCAAAAAGTGACGTATTCGGTGACGTTTAAGAAAATTGGTTCGATCGGTCCTTCAATTGAGTTTGGTCAAGGCTATCTCAAATGGGTTTCTGCTGAACATGTCGTTAGAAGTCCGATATCTGTTAAGTTTGTGTGA 2244 45.54 MILILPSLFLLLLLNFHGYEAQVTELPLTNNLQTYIVHVKKPEMVDDLENWHRSFLPETIATSNEQSQSRLLYSYRNVMSGFAARLTEEEVRAMEEKDGFVSARRERILHLHTTRTPHFLGLNRQFGFWKDSNFGKGVIIGVLDGGITPSHPSFNDVGMPHPPAKWKGRCEFNFSACNNKLIGARSFNLATKALKGDADDSPIDVDGHGTHTASTAAGTFVDDAEALGNAKGTAVGMAPLAHLAIYKVCFGEDCPDTDILAALDAAVEDGVDVLSLSLGGESLPFFKDVLAIGAFAAVQKGIFVSCSAANAGPFNATLSNEAPWILTVAASTIDRKIVAVTKLGNGEEFDGESLFQPNDFPPNFLPLVYAGEKNQTAALCGEGSLKDIDVKGKIVVCERGGGIGRIDKGVEVKNAGGSAMILINLQADGFSTEVDAHVLPASHVSNTAGVKIKSYINSTTYPIATILFKGTIIGDENSPSIASFSSRGPSRPSPGILKPDITGPGVSILAAWPFPLDNNTNTKSTTFNVISGTSMSCPHLSGIAALIKSSHPSWSPAAIKSAIMTTANTTNLNGQPILDQNLQPADFFAIGAGHVNPTKTADPGLIYDIQPDDYIPYLCGLGYKNNQVSIIAHKPIDCLAKPSIPEGELNYPSFTVVLGPPQILSRTVTNVGGGREVYTAVVEAPPGVSVTVRPRKIIFSAVNQKVTYSVTFKKIGSIGPSIEFGQGYLKWVSAEHVVRSPISVKFV 747
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 66938643 66941048 - Hsped.06g16050.1 Hepe06g1605 572980

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1605 747 Pfam Peptidase inhibitor I9 34 112 IPR010259 -
Hepe06g1605 747 SUPERFAMILY Subtilisin-like 111 605 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Hepe06g1605 747 ProSiteProfiles Serine proteases, subtilase domain profile. 119 601 - -
Hepe06g1605 747 Gene3D Peptidase S8/S53 domain 137 614 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Hepe06g1605 747 Pfam Subtilase family 135 571 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Hepe06g1605 747 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 742 IPR045051 -
Hepe06g1605 747 Pfam Fibronectin type-III domain 648 744 IPR041469 -
Hepe06g1605 747 FunFam subtilisin-like protease SBT1.5 334 473 - -
Hepe06g1605 747 SUPERFAMILY PA domain 351 464 IPR046450 -
Hepe06g1605 747 CDD Peptidases_S8_3 109 568 IPR034197 -
Hepe06g1605 747 FunFam Subtilisin-like protease SBT1.5 137 362 - -
Hepe06g1605 747 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Hepe06g1605 747 PRINTS Subtilisin serine protease family (S8) signature 531 547 IPR015500 -
Hepe06g1605 747 PRINTS Subtilisin serine protease family (S8) signature 204 217 IPR015500 -
Hepe06g1605 747 Gene3D - 618 746 - -
Hepe06g1605 747 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 112 IPR037045 -
Hepe06g1605 747 Gene3D - 334 474 - -
Hepe06g1605 747 CDD PA_subtilisin_like 340 466 - -
Hepe06g1605 747 Pfam PA domain 366 451 IPR003137 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1605 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1605 Hepe-Chr6:66938643 Hepe06g1891 Hepe-Chr6:70108686 9.75e-210 dispersed
Hepe06g1605 Hepe-Chr6:66938643 Hepe06g1608 Hepe-Chr6:66960142 2.05e-56 proximal
Hepe06g1605 Hepe-Chr6:66938643 Hepe06g1609 Hepe-Chr6:66960706 3.64e-43 proximal
Hepe06g1605 Hepe-Chr6:66938643 Hepe06g1610 Hepe-Chr6:66961201 1.25e-81 proximal
Hepe06g1605 Hepe-Chr6:66938643 Hepe07g0211 Hepe-Chr7:2036266 7.19e-176 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g434 . . . . . . . . . Cmo16g01045 Cma02g01498 . Car02g01261 . . . Cpe05g00291 . . . . . . . . . . . . . . Cone8ag0344 . . . . Csa05g00344 Chy09g01163 . . . Bda07g00509 . . . . . . Cmo02g01539 . . . . . . . Bhi12g00343 . . . Hepe06g1605 . Lcy12g1726 . . . . . . . Lsi09g00337 . . Cme09g01695
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002315 3 2 1 2 2 2 1 1 3 3 2 2 1 2 2 1 2 3 1 1 2 8 1 0 2 5 1 1 2 3 62