Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1625 ATGGAGGGAAGAGATGGTGGTGCAAGTAGTGGGGTTACTGTGGTGGGATCAGATGCTCCGTCGGAGTACCAAATAGCTCCGAGAGCCACCGATAACCCACCGCAGACCGGTGGATCAACGGCGACGGCGACGGCGACGGCAACTCAACCAACTTCTACGCCGCCCACGGCGGCCTCCTCAGTACCGGGAAAGAAGAAAAGAGGGCGGCCGAGAAAATATGGACCCGATGGCTCTGTCGCCATGGCTCTGTCTCCGAAGCCGATTTCTTCATCGGTGCCGCCGCCGGTGATCGATTTCTCGACGGAGAAGAGGGGGAAAGTACGGCCGGCGAGCGCTGTGAGTAAAAGCAAATTTGAAGTGGATAATTTAGGGGACTGGGTTCCATGTTCTGTTGGTGCAAATTTTACGCCCCATATCATCAATGTCAACACAGGCGAGGATGTTACGATGAAGATAATATCATTTTCTCAACAAGGGCCTCGAGCTATATGCATTTTGTCTGCGAACGGTGTGATCTCGAGTGTCACTCTCCGTCAGCCTGACTCCTCTGGAGGAACATTAACATATGAGGGTCGCTTTGAAATATTGTCCTTGTCTGGATCATTCATGCCTAGTGATAATGGAGGAACTAGAAGTAGATCTGGAGGAATGAGTGTTTCCTTAGCAAGTCCAGACGGGCGTGTCGTAGGCGGTGGAGTAGCCGGTCTATTAGTAGCTGCAAGTCCTGTTCAGGTTGTAGTAGGGAGTTTTCTATCTGGAAATCAACAGGAGCAGAAACCTAAAAAGCCAAAACAAGATACTAATTCAACCGCCCCGCCAACTGCTGCCATTCCAATATCTTGCGTCGATCCTAAGTCCAACCTCTCGCCTTCCAGTTCCTTTCGTGGCGATAACTGGTCGATGCTGCCAACTGATTCGAGGAATAAGCCAACTGATATCAATGTATCCCTACCCAGTGCTTAA 963 50.78 MEGRDGGASSGVTVVGSDAPSEYQIAPRATDNPPQTGGSTATATATATQPTSTPPTAASSVPGKKKRGRPRKYGPDGSVAMALSPKPISSSVPPPVIDFSTEKRGKVRPASAVSKSKFEVDNLGDWVPCSVGANFTPHIINVNTGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQQEQKPKKPKQDTNSTAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKPTDINVSLPSA 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 67129009 67132986 + Hsped.06g16250.1 Hepe06g1625 573000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1625 320 Gene3D - 137 267 - -
Hepe06g1625 320 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 34 299 IPR039605 GO:0003680(InterPro)
Hepe06g1625 320 Pfam Plants and Prokaryotes Conserved (PCC) domain 137 250 IPR005175 -
Hepe06g1625 320 FunFam AT-hook motif nuclear-localized protein 1-like 137 269 - -
Hepe06g1625 320 MobiDBLite consensus disorder prediction 284 320 - -
Hepe06g1625 320 ProSiteProfiles PPC domain profile profile. 132 273 IPR005175 -
Hepe06g1625 320 MobiDBLite consensus disorder prediction 28 59 - -
Hepe06g1625 320 SUPERFAMILY AF0104/ALDC/Ptd012-like 134 255 - -
Hepe06g1625 320 MobiDBLite consensus disorder prediction 1 87 - -
Hepe06g1625 320 MobiDBLite consensus disorder prediction 253 320 - -
Hepe06g1625 320 CDD DUF296 136 227 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1875 Hepe-Chr5:69037876 Hepe06g1625 Hepe-Chr6:67129009 1.44e-111 dispersed
Hepe06g1336 Hepe-Chr6:63565499 Hepe06g1625 Hepe-Chr6:67129009 6.83e-88 dispersed
Hepe06g1551 Hepe-Chr6:66230337 Hepe06g1625 Hepe-Chr6:67129009 6.80e-63 dispersed
Hepe06g1625 Hepe-Chr6:67129009 Hepe08g1523 Hepe-Chr8:19506738 3.12e-70 dispersed
Hepe06g1622 Hepe-Chr6:67068574 Hepe06g1625 Hepe-Chr6:67129009 4.51e-21 proximal
Hepe06g1177 Hepe-Chr6:61204959 Hepe06g1625 Hepe-Chr6:67129009 1.66e-133 transposed
Hepe06g1625 Hepe-Chr6:67129009 Hepe07g0228 Hepe-Chr7:2171780 8.20e-87 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1625 - - - 0.0