Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1681 ATGGTGAAGTTGACTCTTGGCTCCGCCGCTGATTCATTCAGTGCAGCCTCTCTTAAAGCCTATCTCTCCGAGTTCATCGCCACTCTCCTTTTCGTCTTCGCCGGTGTCGGCTCCGCCGTCGCCTATGCTAAGTTGACCTCCGACGCGGCGTTGGATCCACCGGGTCTGGTGGCGGTAGCGGTGGCTCATGCCTTCGGGTTGTTCGTCGGTGTGTCGATGGCAGCGAACATCTCCGGGGGCCACTTGAACCCGGCGGTGACCTTCGGGTTGGCCATCGGCGGCAACATCACCATCTTGACCGGCTTGTTCTACTGGATCGCCCAGTTGCTTGGCTCCATTGTTGCTTGCTTTCTCCTTCAGTTCGTTACCAACGGCAAGAGCATCCCGACCCATGGTGTGGCGGCGGGACTAGGAGCAATTGAAGGATTAGTGTTTGAGATAGTAATCACCTTCGGCCTAGTATACACCGTTTACGCTACAGCCGCAGACCCCAAAAAGGGCTCTCTAGGGACCATTGCCCCAATTGCAATTGGGTTCATCGTCGGAGCCAATATCCTCGCCGCCGGCCCATTTAGCGGTGGGTCCATGAACCCGGCCCGTTCGTTCGGCCCAGCTGTTGTGAGTGGAGACTTCTCTCAGATTTGGATCTATTGGGTCGGCCCACTAATTGGAGGTGGGCTTGCTGGGCTTATTTATGGCGACATCTTTATTGGCACTTATGCCTCTGTTCATGTCTCTGCTGATTATGCTTAA 753 55.51 MVKLTLGSAADSFSAASLKAYLSEFIATLLFVFAGVGSAVAYAKLTSDAALDPPGLVAVAVAHAFGLFVGVSMAANISGGHLNPAVTFGLAIGGNITILTGLFYWIAQLLGSIVACFLLQFVTNGKSIPTHGVAAGLGAIEGLVFEIVITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLIGGGLAGLIYGDIFIGTYASVHVSADYA 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 67823776 67826199 + Hsped.06g16810.1 Hepe06g1681 573056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1681 250 NCBIfam MIP family channel protein 23 232 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1681 250 Gene3D Glycerol uptake facilitator protein. 2 246 IPR023271 -
Hepe06g1681 250 CDD MIP 19 232 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1681 250 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Hepe06g1681 250 FunFam Probable aquaporin TIP1-1 2 249 - -
Hepe06g1681 250 SUPERFAMILY Aquaporin-like 16 240 IPR023271 -
Hepe06g1681 250 PANTHER AQUAPORIN-8 5 238 IPR034294 GO:0006833(PANTHER)|GO:0009705(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER)
Hepe06g1681 250 Pfam Major intrinsic protein 14 232 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1681 250 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1681 250 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1681 250 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1681 250 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1681 250 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g1681 250 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0977 Hepe-Chr4:64216315 Hepe06g1681 Hepe-Chr6:67823776 2.06e-100 dispersed
Hepe05g0292 Hepe-Chr5:3585061 Hepe06g1681 Hepe-Chr6:67823776 2.91e-96 dispersed
Hepe06g1352 Hepe-Chr6:63746089 Hepe06g1681 Hepe-Chr6:67823776 5.36e-67 dispersed
Hepe06g1681 Hepe-Chr6:67823776 Hepe10g0358 Hepe-Chr10:3917491 5.28e-78 dispersed
Hepe06g1681 Hepe-Chr6:67823776 Hepe03g1531 Hepe-Chr3:72168875 3.15e-125 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1681 K09873 - csv:101203925 453.751