Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe06g1703 | ATGTATCAGACCATTAAATCAGAGTCTGATTTTGCTTTTCTTGAGCCAATTCGCCGCCACTTGTTGGGCGAATCGGAGTCTGCCGCCGCCTCCACCGCCGTATCCGGCGGCAGACCGACTCCCGTTTTCACCCGGATGGGTAGTTTCAGTAGCTTGATTCCATGTCTTGATGACAATTGGGGAGATTTGCCTCTCAAGGTGGATGACTCTGAAGATATGCTGCTTGCTGCTGTTCTCCGGGATGCCGTCGGTGCTGGATGGGTTCCGTCGCTCGGAAGTTGCGATTTTGGATTCTCGATGGTGAAGTCGGAACCCGAGGTGCTTCCGGTGAGTTTTCCACCGGTGCTACCGAATGTGGCGGTGAAGCCGACGGTGGTACCGGAGAAGGGGAAGCATTATAGAGGAGTGAGGCAACGGCCGTGGGGGAAGTTTGCGGCGGAGATTCGAGACCCGGCGAAAAATGGTGCTAGAGTTTGGCTTGGAACTTACGAGACGGCGGAGGATGCGGCTCTAGCTTATGATCGGGCGGCCTATCGAATGCGAGGCTCAAGGGCTCTGCTCAATTTCCCCCTTCGTGTGAACTCCGGTGAGCCAGAACCGGTTCGAGTAACGTCGAAGCGATCCTCACCGGAGCTTTCCACGTCGCCAAAGCGGCGGAAGAAGGTCGGCTCCACCGCAGAAGGTGGGGGAGTACAAGTGGAGCAACAACAAGTGGGAACCTTTACACATGGAGGGCAGCTGTTTGTTAGCCAATGCTAA | 759 | 55.73 | MYQTIKSESDFAFLEPIRRHLLGESESAAASTAVSGGRPTPVFTRMGSFSSLIPCLDDNWGDLPLKVDDSEDMLLAAVLRDAVGAGWVPSLGSCDFGFSMVKSEPEVLPVSFPPVLPNVAVKPTVVPEKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPEPVRVTSKRSSPELSTSPKRRKKVGSTAEGGGVQVEQQQVGTFTHGGQLFVSQC | 252 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 68020225 | 68021163 | + | Hsped.06g17030.1 | Hepe06g1703 | 573078 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe06g1703 | 252 | MobiDBLite | consensus disorder prediction | 197 | 231 | - | - | |
Hepe06g1703 | 252 | Gene3D | AP2/ERF domain | 131 | 193 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe06g1703 | 252 | SMART | rav1_2 | 132 | 196 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe06g1703 | 252 | ProSiteProfiles | AP2/ERF domain profile. | 132 | 190 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe06g1703 | 252 | PANTHER | DNA-BINDING DOMAIN | 118 | 218 | IPR044808 | GO:0003700(InterPro)|GO:0009873(InterPro) | |
Hepe06g1703 | 252 | SUPERFAMILY | DNA-binding domain | 132 | 192 | IPR016177 | GO:0003677(InterPro) | |
Hepe06g1703 | 252 | CDD | AP2 | 131 | 190 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe06g1703 | 252 | PRINTS | Ethylene responsive element binding protein signature | 156 | 172 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe06g1703 | 252 | PRINTS | Ethylene responsive element binding protein signature | 133 | 144 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe06g1703 | 252 | Pfam | AP2 domain | 132 | 183 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe06g1703 | 252 | FunFam | Ethylene-responsive transcription factor 2 | 131 | 191 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe05g1650 | Hepe-Chr5:66352616 | Hepe06g1703 | Hepe-Chr6:68020225 | 4.48e-26 | dispersed | |
Hepe06g1703 | Hepe-Chr6:68020225 | Hepe07g0285 | Hepe-Chr7:2896901 | 1.70e-49 | dispersed | |
Hepe06g1107 | Hepe-Chr6:59709222 | Hepe06g1703 | Hepe-Chr6:68020225 | 5.54e-102 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55827 | PF00847 | AP2 | 9.30E-15 | CL0081 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe06g1703 | K09286 | - | csv:101221583 | 429.098 |