Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1703 ATGTATCAGACCATTAAATCAGAGTCTGATTTTGCTTTTCTTGAGCCAATTCGCCGCCACTTGTTGGGCGAATCGGAGTCTGCCGCCGCCTCCACCGCCGTATCCGGCGGCAGACCGACTCCCGTTTTCACCCGGATGGGTAGTTTCAGTAGCTTGATTCCATGTCTTGATGACAATTGGGGAGATTTGCCTCTCAAGGTGGATGACTCTGAAGATATGCTGCTTGCTGCTGTTCTCCGGGATGCCGTCGGTGCTGGATGGGTTCCGTCGCTCGGAAGTTGCGATTTTGGATTCTCGATGGTGAAGTCGGAACCCGAGGTGCTTCCGGTGAGTTTTCCACCGGTGCTACCGAATGTGGCGGTGAAGCCGACGGTGGTACCGGAGAAGGGGAAGCATTATAGAGGAGTGAGGCAACGGCCGTGGGGGAAGTTTGCGGCGGAGATTCGAGACCCGGCGAAAAATGGTGCTAGAGTTTGGCTTGGAACTTACGAGACGGCGGAGGATGCGGCTCTAGCTTATGATCGGGCGGCCTATCGAATGCGAGGCTCAAGGGCTCTGCTCAATTTCCCCCTTCGTGTGAACTCCGGTGAGCCAGAACCGGTTCGAGTAACGTCGAAGCGATCCTCACCGGAGCTTTCCACGTCGCCAAAGCGGCGGAAGAAGGTCGGCTCCACCGCAGAAGGTGGGGGAGTACAAGTGGAGCAACAACAAGTGGGAACCTTTACACATGGAGGGCAGCTGTTTGTTAGCCAATGCTAA 759 55.73 MYQTIKSESDFAFLEPIRRHLLGESESAAASTAVSGGRPTPVFTRMGSFSSLIPCLDDNWGDLPLKVDDSEDMLLAAVLRDAVGAGWVPSLGSCDFGFSMVKSEPEVLPVSFPPVLPNVAVKPTVVPEKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPEPVRVTSKRSSPELSTSPKRRKKVGSTAEGGGVQVEQQQVGTFTHGGQLFVSQC 252
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 68020225 68021163 + Hsped.06g17030.1 Hepe06g1703 573078
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1703 252 MobiDBLite consensus disorder prediction 197 231 - -
Hepe06g1703 252 Gene3D AP2/ERF domain 131 193 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe06g1703 252 SMART rav1_2 132 196 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe06g1703 252 ProSiteProfiles AP2/ERF domain profile. 132 190 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe06g1703 252 PANTHER DNA-BINDING DOMAIN 118 218 IPR044808 GO:0003700(InterPro)|GO:0009873(InterPro)
Hepe06g1703 252 SUPERFAMILY DNA-binding domain 132 192 IPR016177 GO:0003677(InterPro)
Hepe06g1703 252 CDD AP2 131 190 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe06g1703 252 PRINTS Ethylene responsive element binding protein signature 156 172 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe06g1703 252 PRINTS Ethylene responsive element binding protein signature 133 144 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe06g1703 252 Pfam AP2 domain 132 183 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe06g1703 252 FunFam Ethylene-responsive transcription factor 2 131 191 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1650 Hepe-Chr5:66352616 Hepe06g1703 Hepe-Chr6:68020225 4.48e-26 dispersed
Hepe06g1703 Hepe-Chr6:68020225 Hepe07g0285 Hepe-Chr7:2896901 1.70e-49 dispersed
Hepe06g1107 Hepe-Chr6:59709222 Hepe06g1703 Hepe-Chr6:68020225 5.54e-102 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55827 PF00847 AP2 9.30E-15 CL0081 Hepe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1703 K09286 - csv:101221583 429.098