Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1744 ATGGAGATCTCGAAGATTCTGATGGTTGTAATATTTGGTGTGGTTTTGCATGAAATTGAAAGTTTAGGCGATGTTGGACCTTTGGTTTTTGACTATTACAAAGAAACATGTCCCTTTGTCGAAGATATTATTCGACTACAAGTCGAGATTGCGGTGCTCAAAGATCCTCGAATGGCGGCTTCTCTTCTCCGTTTGCATTTCCATGATTGTTTTGTTATGGGATGTGATGCATCGGTTCTCCTAGACAGCAACGAGGAGATGGTGAGTGAAAAGCAAGCAGCTCCAAATTTGAACTCCCTTCGTGGGTTCAATGTGATTGATGAGATAAAATACATATTGGAAGAAGCTTGTCCTGACACTATTTCTTGTGCTGATATTTTGACCATTGCTGCTCGTGATGCTGTTGTGCTTAGAGGGGGGCCTGGATGGGAAGTGTCATTGGGAAGGAAAGACTCCCTGAAAGCAAGCTTTGATGGAGCCAACAAATATATCCCTTCTCCCAATTCCTCTCTTGAGACCCTAATTGCCAATTTTCAAGAACAAGGCCTTGATGTTGGAGACTTGGTTGCCCTGTCAGGAAGCCACACCATAGGGAAAGCAAGATGCTTGAGCTTCAGGCAAAGAGTATACCAAATGAATTCAGAAGAAGAACATGACAGATACAAGAGATACAACACATACAGAAGAATTTTAAGGTCCATTTGCCCTCAAACAGGGCAAGATCAAAGGATAGCACCCTTAGATTTTGGGACACCTGCAAGGTTTGACAACCACTATTTCCTCAACATTCTTCAAGGCAAAGGGCTATTGGGATCTGACAATGTGCTCATAACTCAAGACCATGAAGGTGAAATTAGAAGACAAGTTTGGAGCTATGCCTCTGACCAAACCCTTTTCTTTGATTCCTTTGTCAACTCCATTGTCAAGATGGGGAACATCAATGTCCTCACTGCCCATCAAGGTGAAGTTAGAAGGAATTGTAGGTTTGCCAATCATTAG 999 42.54 MEISKILMVVIFGVVLHEIESLGDVGPLVFDYYKETCPFVEDIIRLQVEIAVLKDPRMAASLLRLHFHDCFVMGCDASVLLDSNEEMVSEKQAAPNLNSLRGFNVIDEIKYILEEACPDTISCADILTIAARDAVVLRGGPGWEVSLGRKDSLKASFDGANKYIPSPNSSLETLIANFQEQGLDVGDLVALSGSHTIGKARCLSFRQRVYQMNSEEEHDRYKRYNTYRRILRSICPQTGQDQRIAPLDFGTPARFDNHYFLNILQGKGLLGSDNVLITQDHEGEIRRQVWSYASDQTLFFDSFVNSIVKMGNINVLTAHQGEVRRNCRFANH 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 68520938 68523099 + Hsped.06g17440.1 Hepe06g1744 573119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1744 332 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe06g1744 332 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe06g1744 332 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe06g1744 332 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe06g1744 332 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe06g1744 332 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe06g1744 332 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe06g1744 332 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe06g1744 332 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe06g1744 332 FunFam Peroxidase 165 310 - -
Hepe06g1744 332 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe06g1744 332 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe06g1744 332 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe06g1744 332 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe06g1744 332 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe06g1744 332 CDD secretory_peroxidase 28 329 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe06g1744 332 Gene3D Peroxidase, domain 2 165 311 - -
Hepe06g1744 332 Gene3D - 32 331 - -
Hepe06g1744 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Hepe06g1744 332 Pfam Peroxidase 47 295 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe06g1744 332 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601(InterPro)
Hepe06g1744 332 ProSiteProfiles Plant heme peroxidase family profile. 27 331 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe06g1744 332 SUPERFAMILY Heme-dependent peroxidases 28 331 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe06g1744 332 PANTHER PEROXIDASE 72-RELATED 10 329 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe06g1744 332 FunFam Peroxidase 31 173 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1554 Hepe-Chr4:71086778 Hepe06g1744 Hepe-Chr6:68520938 4.47e-103 dispersed
Hepe06g1744 Hepe-Chr6:68520938 Hepe08g0082 Hepe-Chr8:648102 1.64e-92 dispersed
Hepe06g1744 Hepe-Chr6:68520938 Hepe07g0701 Hepe-Chr7:8393147 2.53e-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1744 K00430 - csv:101207771 566.614