Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1763 ATGGCTGGTCTGGATTTAGGCAATCACTATATTCACCATCTTCAAAGACCTGATTTCAACCTTCACCACCACCACCACCACCACCACGACTCTCAATCTCCTCATGACGACCAATCCAATCACTCGTTGGAATTCGTTGCGGCGGCTTCCACTGACCCCGCCACCGATTTGGTGGCAGCCTCTCGCCGTCCGCGCGGCCGTCCACCGGGCTCCAAAAATAAGATGAGGCCACCGGTCATCATAACCCGGGAGAGCGCCAATACCCTACGAGCTCATATTCTTGAGGTCGCCACTGGCTGCGACGTTTTCGATTGCATCGCCACCTACGCCCGCCGTCGCCAGCGCGGGATCTGCATCTTGAGTGGCAGTGGCATGGTAACCAATGTCAACTTGCGGCAGCCAACTGCCGCCGGTGCTGTCTTGGCCCTACAAGGGAGGTTTGAGATTTTATCGCTCACTGGATCTTTCCTGCCGCCGCCTGCTCCTCCTGGCGCTACGAGTTTGACCATATACTTGGGCGGCGGCCAAGGCCAAGTGGTTGGTGGAAACGTCGTCGGGGAGCTGGTGGCGGCAGGGCCAGTAACAGTCATCGCCGCATCGTTTACTAACGTAGCGTACGAGAGACTGCCACTGGAAGAACAAGAACAAGAACAAGAACAAGATCAGGAACAAGAACAAGATCAACTTCAGATGCAGCCACTGACGTCTCAAGGCGGTGGTGGTGGCGGTGGCGGTGGCGGTACCAATAACCCATTTCCAGATCCATCTTCAGGGCTTCCTTTCTTCAATTTGCCTCTAAATATGCAGAATCAAATTCAGCTACCATTCTGA 831 54.87 MAGLDLGNHYIHHLQRPDFNLHHHHHHHHDSQSPHDDQSNHSLEFVAAASTDPATDLVAASRRPRGRPPGSKNKMRPPVIITRESANTLRAHILEVATGCDVFDCIATYARRRQRGICILSGSGMVTNVNLRQPTAAGAVLALQGRFEILSLTGSFLPPPAPPGATSLTIYLGGGQGQVVGGNVVGELVAAGPVTVIAASFTNVAYERLPLEEQEQEQEQDQEQEQDQLQMQPLTSQGGGGGGGGGGTNNPFPDPSSGLPFFNLPLNMQNQIQLPF 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 68737986 68739266 + Hsped.06g17630.1 Hepe06g1763 573138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1763 276 MobiDBLite consensus disorder prediction 213 263 - -
Hepe06g1763 276 PIRSF ESCAROLA 9 271 IPR014476 GO:0003680(InterPro)
Hepe06g1763 276 MobiDBLite consensus disorder prediction 54 76 - -
Hepe06g1763 276 Gene3D - 89 225 - -
Hepe06g1763 276 Pfam Plants and Prokaryotes Conserved (PCC) domain 90 202 IPR005175 -
Hepe06g1763 276 SUPERFAMILY AF0104/ALDC/Ptd012-like 86 215 - -
Hepe06g1763 276 FunFam AT-hook motif nuclear-localized protein 89 217 - -
Hepe06g1763 276 CDD DUF296 90 165 IPR005175 -
Hepe06g1763 276 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 29 269 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Hepe06g1763 276 Coils Coil 211 232 - -
Hepe06g1763 276 ProSiteProfiles PPC domain profile profile. 86 223 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0422 Hepe-Chr3:6308804 Hepe06g1763 Hepe-Chr6:68737986 3.50e-95 dispersed
Hepe06g1033 Hepe-Chr6:58384151 Hepe06g1763 Hepe-Chr6:68737986 8.45e-100 dispersed
Hepe06g1622 Hepe-Chr6:67068574 Hepe06g1763 Hepe-Chr6:68737986 1.21e-76 dispersed
Hepe06g1763 Hepe-Chr6:68737986 Hepe08g2445 Hepe-Chr8:65405116 1.96e-54 dispersed
Hepe05g1836 Hepe-Chr5:68663914 Hepe06g1763 Hepe-Chr6:68737986 1.25e-95 wgd
Hepe06g1032 Hepe-Chr6:58368338 Hepe06g1763 Hepe-Chr6:68737986 7.83e-14 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1763 - - - 0.0