Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe06g1765 | ATGGATTCACTTGATACTCCACCTCCGTCACTTTCAGCATCGTCCAACATGGCGGTCGGAGTACCGACGGCGTATTCAACCGCCATGTCTAACGCTAACAACAATTCCTCCTCCACCATTGGTCTAAATCCGGCTGCCACTCAAATGATGCCTCCTACATCGCGATTTCCGTTCAACTCCGTGATCGCCCCTGCATCCGTACCTTTGGATTCTCTCAATGTTTCTCCCTACGACGGATCGCATTCTGGAAATTTCAATGTCGATTCGGGGAAGAAAAAGAGAGGCCGGCCGAGGAAGTACGCGCCTGATGGTAACAACATTGCCTTGGGTTTGTCACCTACTACTGTTACGTCTTCTGTTGGTCACGGGGATTTGACCGGTACTCCTGATTCGGAGCAGCCGGCGAGGAAAGCCAGGGGAAGGCCACCGGGCTCTGGAAAGAAGCAGATGAATTCTCATGGTTCAGGCGGCATTGGTTTTACTCCTCACGTTGTATTGGCGAAGCCTGGAGAGGATGTAGCAGCCAAAATTTTGTCCTTCTCACAGCAAGGACCACGAACTGTCTTTATTCTCTCAGCAAACGGTACCATCAGTAATGCTACCCTTCGGCACCGGGCTACATCTGGTGGTTCTGTGACATATGAGGGCCAGTATGAGATCATCTCTCTGTCAGGCTCCTTTTTGCTCTCGGAGAATAATGGAACTCGAAGTAGAACAGGTGGTTTGAGTGTATTGCTGGCTGGGTCAGACGGACAGGTTCTTGGTGGTGGAGTTGCAGGAATGCTAATGGCAGGTTCTCAAGTACAGGTGATTGTGGGAAGTTTTCTCGAGGAGGATAAGAAATCCAACACAAGTATGCTGAATTCTGGAACTTCTGCTGCGCCATCCCAAATGATGAACTTTGGTGGTGGAGCAGTAACAGCAGCAGCGAGCCCTCCGTCGTTAGGGGCATCGAGCGGGGAGTCGTCTGCAGAAAACGGAGACAGCCCTCTTAATAATAGGCATCCTGGAATGTTCAATAGTAGCACACAGCCGATCCACAATATGCAGCAGATGTACCACCAATTATGGGCAGGCCAAACACAGTAG | 1089 | 50.6 | MDSLDTPPPSLSASSNMAVGVPTAYSTAMSNANNNSSSTIGLNPAATQMMPPTSRFPFNSVIAPASVPLDSLNVSPYDGSHSGNFNVDSGKKKRGRPRKYAPDGNNIALGLSPTTVTSSVGHGDLTGTPDSEQPARKARGRPPGSGKKQMNSHGSGGIGFTPHVVLAKPGEDVAAKILSFSQQGPRTVFILSANGTISNATLRHRATSGGSVTYEGQYEIISLSGSFLLSENNGTRSRTGGLSVLLAGSDGQVLGGGVAGMLMAGSQVQVIVGSFLEEDKKSNTSMLNSGTSAAPSQMMNFGGGAVTAAASPPSLGASSGESSAENGDSPLNNRHPGMFNSSTQPIHNMQQMYHQLWAGQTQ | 362 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 68749609 | 68754412 | - | Hsped.06g17650.1 | Hepe06g1765 | 573140 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe06g1765 | 362 | ProSiteProfiles | PPC domain profile profile. | 156 | 297 | IPR005175 | - | |
Hepe06g1765 | 362 | MobiDBLite | consensus disorder prediction | 76 | 163 | - | - | |
Hepe06g1765 | 362 | MobiDBLite | consensus disorder prediction | 304 | 344 | - | - | |
Hepe06g1765 | 362 | Gene3D | - | 162 | 290 | - | - | |
Hepe06g1765 | 362 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 160 | 278 | - | - | |
Hepe06g1765 | 362 | CDD | DUF296 | 161 | 275 | IPR005175 | - | |
Hepe06g1765 | 362 | MobiDBLite | consensus disorder prediction | 108 | 126 | - | - | |
Hepe06g1765 | 362 | MobiDBLite | consensus disorder prediction | 312 | 344 | - | - | |
Hepe06g1765 | 362 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 33 | 330 | IPR039605 | GO:0003680(InterPro) | |
Hepe06g1765 | 362 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 162 | 275 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe06g1765 | Hepe-Chr6:68749609 | Hepe08g1523 | Hepe-Chr8:19506738 | 1.91e-71 | dispersed | |
Hepe06g1765 | Hepe-Chr6:68749609 | Hepe06g1032 | Hepe-Chr6:58368338 | 1.20e-115 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe06g1765 | - | - | - | 0.0 |