Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1765 ATGGATTCACTTGATACTCCACCTCCGTCACTTTCAGCATCGTCCAACATGGCGGTCGGAGTACCGACGGCGTATTCAACCGCCATGTCTAACGCTAACAACAATTCCTCCTCCACCATTGGTCTAAATCCGGCTGCCACTCAAATGATGCCTCCTACATCGCGATTTCCGTTCAACTCCGTGATCGCCCCTGCATCCGTACCTTTGGATTCTCTCAATGTTTCTCCCTACGACGGATCGCATTCTGGAAATTTCAATGTCGATTCGGGGAAGAAAAAGAGAGGCCGGCCGAGGAAGTACGCGCCTGATGGTAACAACATTGCCTTGGGTTTGTCACCTACTACTGTTACGTCTTCTGTTGGTCACGGGGATTTGACCGGTACTCCTGATTCGGAGCAGCCGGCGAGGAAAGCCAGGGGAAGGCCACCGGGCTCTGGAAAGAAGCAGATGAATTCTCATGGTTCAGGCGGCATTGGTTTTACTCCTCACGTTGTATTGGCGAAGCCTGGAGAGGATGTAGCAGCCAAAATTTTGTCCTTCTCACAGCAAGGACCACGAACTGTCTTTATTCTCTCAGCAAACGGTACCATCAGTAATGCTACCCTTCGGCACCGGGCTACATCTGGTGGTTCTGTGACATATGAGGGCCAGTATGAGATCATCTCTCTGTCAGGCTCCTTTTTGCTCTCGGAGAATAATGGAACTCGAAGTAGAACAGGTGGTTTGAGTGTATTGCTGGCTGGGTCAGACGGACAGGTTCTTGGTGGTGGAGTTGCAGGAATGCTAATGGCAGGTTCTCAAGTACAGGTGATTGTGGGAAGTTTTCTCGAGGAGGATAAGAAATCCAACACAAGTATGCTGAATTCTGGAACTTCTGCTGCGCCATCCCAAATGATGAACTTTGGTGGTGGAGCAGTAACAGCAGCAGCGAGCCCTCCGTCGTTAGGGGCATCGAGCGGGGAGTCGTCTGCAGAAAACGGAGACAGCCCTCTTAATAATAGGCATCCTGGAATGTTCAATAGTAGCACACAGCCGATCCACAATATGCAGCAGATGTACCACCAATTATGGGCAGGCCAAACACAGTAG 1089 50.6 MDSLDTPPPSLSASSNMAVGVPTAYSTAMSNANNNSSSTIGLNPAATQMMPPTSRFPFNSVIAPASVPLDSLNVSPYDGSHSGNFNVDSGKKKRGRPRKYAPDGNNIALGLSPTTVTSSVGHGDLTGTPDSEQPARKARGRPPGSGKKQMNSHGSGGIGFTPHVVLAKPGEDVAAKILSFSQQGPRTVFILSANGTISNATLRHRATSGGSVTYEGQYEIISLSGSFLLSENNGTRSRTGGLSVLLAGSDGQVLGGGVAGMLMAGSQVQVIVGSFLEEDKKSNTSMLNSGTSAAPSQMMNFGGGAVTAAASPPSLGASSGESSAENGDSPLNNRHPGMFNSSTQPIHNMQQMYHQLWAGQTQ 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 68749609 68754412 - Hsped.06g17650.1 Hepe06g1765 573140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1765 362 ProSiteProfiles PPC domain profile profile. 156 297 IPR005175 -
Hepe06g1765 362 MobiDBLite consensus disorder prediction 76 163 - -
Hepe06g1765 362 MobiDBLite consensus disorder prediction 304 344 - -
Hepe06g1765 362 Gene3D - 162 290 - -
Hepe06g1765 362 SUPERFAMILY AF0104/ALDC/Ptd012-like 160 278 - -
Hepe06g1765 362 CDD DUF296 161 275 IPR005175 -
Hepe06g1765 362 MobiDBLite consensus disorder prediction 108 126 - -
Hepe06g1765 362 MobiDBLite consensus disorder prediction 312 344 - -
Hepe06g1765 362 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 33 330 IPR039605 GO:0003680(InterPro)
Hepe06g1765 362 Pfam Plants and Prokaryotes Conserved (PCC) domain 162 275 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1765 Hepe-Chr6:68749609 Hepe08g1523 Hepe-Chr8:19506738 1.91e-71 dispersed
Hepe06g1765 Hepe-Chr6:68749609 Hepe06g1032 Hepe-Chr6:58368338 1.20e-115 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1765 - - - 0.0