Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1772 ATGACGGACTACCGATTACCGCCGACGATGAATCTCTGGGCGGATGAGAACGCCTCGATGATGGACGCATTCATGACCACCGATCTGAGTTCCTTTTGGGTTACGCCGCCACAGCCGCAGCAACTTCCTCAGCCGCCGTATTCCTCTGTTTCCGCCCCACCGGACACGAGTAAAGCAGTCGGTCAATCTCCGCCGCCGTCCATGGCGGTTTTCAACCAGGAGACTCTCCAGCAACGCCTTCAAGCTTTGATTGAAGGCGCTCATGAGAGCTGGACTTACGCTATCTTCTGGCAGTCTTCGTACGACTACTCCGGCTCCACCGTCTTGGGCTGGGGCGATGGATACTACAAAGGCGAAGAAGATAAAGGCAAGGAGAAGGGCAAATCGAGCACCTCAAAAGCGGAGCAAGAGCACCGTAAGAAGGTACTTCGCGAGCTCAACTCTCTCATTTCTGGTTCCCCTACATCTGAAGACGACGCCGTCGACGAAGTCGTTACCGACACCGAGTGGTTCTTCTTGGTGTCGATGACTCAGTCGTTCGTTTCCGGCGTCGGATTGCCGGGACAGGCGTTCTTCGATTCGAACCCTATTTGGCTTGCCGGTTCGGATCGGCTTGCCAGCTCGTTCTGCGAACGGGCTCGCCAGGGTCAGGTTTTCGGATTGCAGACCATGGTTTGTATACCGTCGGCGAATGGAGTCGTTGAATTAGGATCGAGTGAGGTTATTTTCCAGAGCTCGGATCTGATGAATAAGGTTAGGGTTTTGTTCGATTTCAATAATCTGGAGGTTGAGACTTGGCCAATTAGTGGTGTTGACCAAGGGGAGAATGATCCGTCTTCGCTCTGGATCAGTGAACCATCAACCGCCATTGAAATTAAGGACCCTGTGACTGTAAATCCTGTTGCTTCAGCTCCAATTCCAACTCCAACTCCAACTCCGACCACCACGAACAGCCAGCCGATTTCCAAAATTACAACACAGACTGAAAACCCTAAATCGAGTGTCGTGACTGAAGCTCCAAGCTCTGTTTCTGTTCCTCCTTCTCAGAAGAGTCACCGACAGTCGCAGCCGAATCACACACAGAGCTTCTTCACCAGGGAATTGAATTTCTCTGAATTTGGGTACGATAATAGCAGCGTGAAGGATGGGAATTCACATTCTCTCAAGCCGGAATCCGGCGAGCTTCTGAATTTTGGCGAGAGCAAGAGGAGTTCTTACCCCAACACAGATAACTTGCCTTCGGGGAATTCCCAATTTGCAGGGGATGAGAGTAAGAAGAAGAGATCCCCCACTTCACGTGGGAGTAATGAAGAGGGGATGCTTTCTTTTACTTCTGGTGTGATTCTTCCGTCTTCTGGGACTGTGAAATCGAATGGTTGCATTGCCGATTCCGATCACTCCGACCTCGAAGCTTCGGTGATTCGTGAGGTGGAGAGTAGTAGAGTGGTGGAACCGGAGAAACGGCCTCGAAAAAGGGGGCGAAAGCCGGCAAATGGTAGAGAAGAACCATTGAATCACGTTGAAGCTGAGAGGCAGAGGAGAGAAAAGCTAAACCAAAGATTCTATGCTCTTCGTGCTGTGGTTCCGAATGTATCAAAAATGGACAAAGCTTCACTTCTTGGCGATGCAATCTCTTACATCAATGAGCTCAGAGGGAAGCTTCAAACTGCAGAATCAGATAAGGAGGATTTGCAGAAGCAATTGGATTCAGTGAAGAAGTTGATGATGTCTAGTAGTAAAGATTCGAGCATATCAAGCTCAAATCAACCCCCACCAGATCAAGACATAAAAGCATCAAATATCCATGGAAACGATACTGGTATCGAAACCGATATCGACGTGAAGATAATCAGTTGGGACGCAATGATTCGGATCCAATCAAGTAAGAAAAACCATCCCGCTGCACGGCTGATGGCAGCGTTGGAGGAACTGGACTTAGATATCAACCACGCAAGCATTTCAGTTGTCAATGATCTGATGATCCAACAAGCAACAGTCAAGATGGGGAGTCGGTTATACACTCAGGAGCAGCTAAGGCTAGCTTTATCGTCAAAAATAGGCGCAACTCGGTAG 2073 49.35 MTDYRLPPTMNLWADENASMMDAFMTTDLSSFWVTPPQPQQLPQPPYSSVSAPPDTSKAVGQSPPPSMAVFNQETLQQRLQALIEGAHESWTYAIFWQSSYDYSGSTVLGWGDGYYKGEEDKGKEKGKSSTSKAEQEHRKKVLRELNSLISGSPTSEDDAVDEVVTDTEWFFLVSMTQSFVSGVGLPGQAFFDSNPIWLAGSDRLASSFCERARQGQVFGLQTMVCIPSANGVVELGSSEVIFQSSDLMNKVRVLFDFNNLEVETWPISGVDQGENDPSSLWISEPSTAIEIKDPVTVNPVASAPIPTPTPTPTTTNSQPISKITTQTENPKSSVVTEAPSSVSVPPSQKSHRQSQPNHTQSFFTRELNFSEFGYDNSSVKDGNSHSLKPESGELLNFGESKRSSYPNTDNLPSGNSQFAGDESKKKRSPTSRGSNEEGMLSFTSGVILPSSGTVKSNGCIADSDHSDLEASVIREVESSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLQTAESDKEDLQKQLDSVKKLMMSSSKDSSISSSNQPPPDQDIKASNIHGNDTGIETDIDVKIISWDAMIRIQSSKKNHPAARLMAALEELDLDINHASISVVNDLMIQQATVKMGSRLYTQEQLRLALSSKIGATR 690
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 68801441 68804118 - Hsped.06g17720.1 Hepe06g1772 573147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1772 690 PANTHER MYC 67 685 IPR045084 GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006355(PANTHER)
Hepe06g1772 690 FunFam Transcription factor bHLH13 494 568 - -
Hepe06g1772 690 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 504 574 IPR036638 GO:0046983(InterPro)
Hepe06g1772 690 CDD bHLH_AtAIB_like 498 573 - -
Hepe06g1772 690 MobiDBLite consensus disorder prediction 398 420 - -
Hepe06g1772 690 Coils Coil 547 574 - -
Hepe06g1772 690 SMART finulus 507 556 IPR011598 GO:0046983(InterPro)
Hepe06g1772 690 MobiDBLite consensus disorder prediction 478 511 - -
Hepe06g1772 690 Pfam Plant bHLH transcription factor, ACT-like domain 612 668 IPR054502 -
Hepe06g1772 690 Gene3D - 500 577 IPR036638 GO:0046983(InterPro)
Hepe06g1772 690 MobiDBLite consensus disorder prediction 35 64 - -
Hepe06g1772 690 MobiDBLite consensus disorder prediction 315 361 - -
Hepe06g1772 690 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 76 256 IPR025610 -
Hepe06g1772 690 MobiDBLite consensus disorder prediction 574 604 - -
Hepe06g1772 690 MobiDBLite consensus disorder prediction 300 361 - -
Hepe06g1772 690 MobiDBLite consensus disorder prediction 119 138 - -
Hepe06g1772 690 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 501 550 IPR011598 GO:0046983(InterPro)
Hepe06g1772 690 Pfam Helix-loop-helix DNA-binding domain 505 551 IPR011598 GO:0046983(InterPro)
Hepe06g1772 690 MobiDBLite consensus disorder prediction 375 441 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0933 Hepe-Chr6:56868512 Hepe06g1772 Hepe-Chr6:68801441 1.14e-32 dispersed
Hepe06g1772 Hepe-Chr6:68801441 Hepe06g1943 Hepe-Chr6:70723119 3.67e-30 dispersed
Hepe03g0553 Hepe-Chr3:10741990 Hepe06g1772 Hepe-Chr6:68801441 5.35e-20 transposed
Hepe06g1020 Hepe-Chr6:58162673 Hepe06g1772 Hepe-Chr6:68801441 2.18e-260 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55834 PF14215 bHLH-MYC_N 1.00E-55 CL0161 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1772 K13422 - csv:101218165 1029.24