Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe06g1772 | ATGACGGACTACCGATTACCGCCGACGATGAATCTCTGGGCGGATGAGAACGCCTCGATGATGGACGCATTCATGACCACCGATCTGAGTTCCTTTTGGGTTACGCCGCCACAGCCGCAGCAACTTCCTCAGCCGCCGTATTCCTCTGTTTCCGCCCCACCGGACACGAGTAAAGCAGTCGGTCAATCTCCGCCGCCGTCCATGGCGGTTTTCAACCAGGAGACTCTCCAGCAACGCCTTCAAGCTTTGATTGAAGGCGCTCATGAGAGCTGGACTTACGCTATCTTCTGGCAGTCTTCGTACGACTACTCCGGCTCCACCGTCTTGGGCTGGGGCGATGGATACTACAAAGGCGAAGAAGATAAAGGCAAGGAGAAGGGCAAATCGAGCACCTCAAAAGCGGAGCAAGAGCACCGTAAGAAGGTACTTCGCGAGCTCAACTCTCTCATTTCTGGTTCCCCTACATCTGAAGACGACGCCGTCGACGAAGTCGTTACCGACACCGAGTGGTTCTTCTTGGTGTCGATGACTCAGTCGTTCGTTTCCGGCGTCGGATTGCCGGGACAGGCGTTCTTCGATTCGAACCCTATTTGGCTTGCCGGTTCGGATCGGCTTGCCAGCTCGTTCTGCGAACGGGCTCGCCAGGGTCAGGTTTTCGGATTGCAGACCATGGTTTGTATACCGTCGGCGAATGGAGTCGTTGAATTAGGATCGAGTGAGGTTATTTTCCAGAGCTCGGATCTGATGAATAAGGTTAGGGTTTTGTTCGATTTCAATAATCTGGAGGTTGAGACTTGGCCAATTAGTGGTGTTGACCAAGGGGAGAATGATCCGTCTTCGCTCTGGATCAGTGAACCATCAACCGCCATTGAAATTAAGGACCCTGTGACTGTAAATCCTGTTGCTTCAGCTCCAATTCCAACTCCAACTCCAACTCCGACCACCACGAACAGCCAGCCGATTTCCAAAATTACAACACAGACTGAAAACCCTAAATCGAGTGTCGTGACTGAAGCTCCAAGCTCTGTTTCTGTTCCTCCTTCTCAGAAGAGTCACCGACAGTCGCAGCCGAATCACACACAGAGCTTCTTCACCAGGGAATTGAATTTCTCTGAATTTGGGTACGATAATAGCAGCGTGAAGGATGGGAATTCACATTCTCTCAAGCCGGAATCCGGCGAGCTTCTGAATTTTGGCGAGAGCAAGAGGAGTTCTTACCCCAACACAGATAACTTGCCTTCGGGGAATTCCCAATTTGCAGGGGATGAGAGTAAGAAGAAGAGATCCCCCACTTCACGTGGGAGTAATGAAGAGGGGATGCTTTCTTTTACTTCTGGTGTGATTCTTCCGTCTTCTGGGACTGTGAAATCGAATGGTTGCATTGCCGATTCCGATCACTCCGACCTCGAAGCTTCGGTGATTCGTGAGGTGGAGAGTAGTAGAGTGGTGGAACCGGAGAAACGGCCTCGAAAAAGGGGGCGAAAGCCGGCAAATGGTAGAGAAGAACCATTGAATCACGTTGAAGCTGAGAGGCAGAGGAGAGAAAAGCTAAACCAAAGATTCTATGCTCTTCGTGCTGTGGTTCCGAATGTATCAAAAATGGACAAAGCTTCACTTCTTGGCGATGCAATCTCTTACATCAATGAGCTCAGAGGGAAGCTTCAAACTGCAGAATCAGATAAGGAGGATTTGCAGAAGCAATTGGATTCAGTGAAGAAGTTGATGATGTCTAGTAGTAAAGATTCGAGCATATCAAGCTCAAATCAACCCCCACCAGATCAAGACATAAAAGCATCAAATATCCATGGAAACGATACTGGTATCGAAACCGATATCGACGTGAAGATAATCAGTTGGGACGCAATGATTCGGATCCAATCAAGTAAGAAAAACCATCCCGCTGCACGGCTGATGGCAGCGTTGGAGGAACTGGACTTAGATATCAACCACGCAAGCATTTCAGTTGTCAATGATCTGATGATCCAACAAGCAACAGTCAAGATGGGGAGTCGGTTATACACTCAGGAGCAGCTAAGGCTAGCTTTATCGTCAAAAATAGGCGCAACTCGGTAG | 2073 | 49.35 | MTDYRLPPTMNLWADENASMMDAFMTTDLSSFWVTPPQPQQLPQPPYSSVSAPPDTSKAVGQSPPPSMAVFNQETLQQRLQALIEGAHESWTYAIFWQSSYDYSGSTVLGWGDGYYKGEEDKGKEKGKSSTSKAEQEHRKKVLRELNSLISGSPTSEDDAVDEVVTDTEWFFLVSMTQSFVSGVGLPGQAFFDSNPIWLAGSDRLASSFCERARQGQVFGLQTMVCIPSANGVVELGSSEVIFQSSDLMNKVRVLFDFNNLEVETWPISGVDQGENDPSSLWISEPSTAIEIKDPVTVNPVASAPIPTPTPTPTTTNSQPISKITTQTENPKSSVVTEAPSSVSVPPSQKSHRQSQPNHTQSFFTRELNFSEFGYDNSSVKDGNSHSLKPESGELLNFGESKRSSYPNTDNLPSGNSQFAGDESKKKRSPTSRGSNEEGMLSFTSGVILPSSGTVKSNGCIADSDHSDLEASVIREVESSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLQTAESDKEDLQKQLDSVKKLMMSSSKDSSISSSNQPPPDQDIKASNIHGNDTGIETDIDVKIISWDAMIRIQSSKKNHPAARLMAALEELDLDINHASISVVNDLMIQQATVKMGSRLYTQEQLRLALSSKIGATR | 690 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 68801441 | 68804118 | - | Hsped.06g17720.1 | Hepe06g1772 | 573147 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe06g1772 | 690 | PANTHER | MYC | 67 | 685 | IPR045084 | GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006355(PANTHER) | |
Hepe06g1772 | 690 | FunFam | Transcription factor bHLH13 | 494 | 568 | - | - | |
Hepe06g1772 | 690 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 504 | 574 | IPR036638 | GO:0046983(InterPro) | |
Hepe06g1772 | 690 | CDD | bHLH_AtAIB_like | 498 | 573 | - | - | |
Hepe06g1772 | 690 | MobiDBLite | consensus disorder prediction | 398 | 420 | - | - | |
Hepe06g1772 | 690 | Coils | Coil | 547 | 574 | - | - | |
Hepe06g1772 | 690 | SMART | finulus | 507 | 556 | IPR011598 | GO:0046983(InterPro) | |
Hepe06g1772 | 690 | MobiDBLite | consensus disorder prediction | 478 | 511 | - | - | |
Hepe06g1772 | 690 | Pfam | Plant bHLH transcription factor, ACT-like domain | 612 | 668 | IPR054502 | - | |
Hepe06g1772 | 690 | Gene3D | - | 500 | 577 | IPR036638 | GO:0046983(InterPro) | |
Hepe06g1772 | 690 | MobiDBLite | consensus disorder prediction | 35 | 64 | - | - | |
Hepe06g1772 | 690 | MobiDBLite | consensus disorder prediction | 315 | 361 | - | - | |
Hepe06g1772 | 690 | Pfam | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 76 | 256 | IPR025610 | - | |
Hepe06g1772 | 690 | MobiDBLite | consensus disorder prediction | 574 | 604 | - | - | |
Hepe06g1772 | 690 | MobiDBLite | consensus disorder prediction | 300 | 361 | - | - | |
Hepe06g1772 | 690 | MobiDBLite | consensus disorder prediction | 119 | 138 | - | - | |
Hepe06g1772 | 690 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 501 | 550 | IPR011598 | GO:0046983(InterPro) | |
Hepe06g1772 | 690 | Pfam | Helix-loop-helix DNA-binding domain | 505 | 551 | IPR011598 | GO:0046983(InterPro) | |
Hepe06g1772 | 690 | MobiDBLite | consensus disorder prediction | 375 | 441 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe06g0933 | Hepe-Chr6:56868512 | Hepe06g1772 | Hepe-Chr6:68801441 | 1.14e-32 | dispersed | |
Hepe06g1772 | Hepe-Chr6:68801441 | Hepe06g1943 | Hepe-Chr6:70723119 | 3.67e-30 | dispersed | |
Hepe03g0553 | Hepe-Chr3:10741990 | Hepe06g1772 | Hepe-Chr6:68801441 | 5.35e-20 | transposed | |
Hepe06g1020 | Hepe-Chr6:58162673 | Hepe06g1772 | Hepe-Chr6:68801441 | 2.18e-260 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55834 | PF14215 | bHLH-MYC_N | 1.00E-55 | CL0161 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe06g1772 | K13422 | - | csv:101218165 | 1029.24 |