Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1782 ATGAGTCTTGATGCTCTTTCTTCCAATGACTTATTCAACTTCATCATCTACGATACCATCTCTGCAACGCCGAACACTTCTCAGGGCCACCGCGACTTGTCGTCGGAGAATACTTTCTTCTCCGACGACAAGTGTTTGAAACTACATCAAGATCATCATGATGACCAACACGGGTTCGAAGAAGGTCGAGCCCCGAAACCCAATTCGAGAAAACGGCGCTCGAGCGAGGTCGAAAGCAACCCGTCGCAGCAAGGGAAGAAGAAGAGAAAGAGAAAACCAAAGGTTTGTAAGAACAAAGAGGAAGCTGAAACACAAAGAATGACACACATTGCTGTCGAAAGGAACCGCCGCAAACAAATGAATGAACATCTTTCAGTGTTACGTTCCCTCATGCCCGAATCCTATGTTCAAAGGGGTGACCAAGCATCCATAGTAGGTGGTGCAGTTGAGTTTGTGAAGGAATTGGAGCATCTTCTTTCAACTCTTGAAGCCAAGAAGCTGCAAATTTTACAGCAAGAAGCAGTACTAGATAAAGATCAACAAGAGAATAATGAAGAATTATTAGATAATTCAGCAGCAAGATCAAGGAAATTGTTTTCAATTTCAGCACCATTTGCAACATTGTTGATGCATTCTAATTCAGATCAAAACTGCTCTTCCACCAAATACACTTCAAAATCAAAGGCTTCTTCAGCTGAAATTGAAGTGACTTTGATTGAAACTCATGCAAATCTTAGAATTCTCTCAACAAAAACTCATAGACAACTCTTGAAGCTCATTGCTGGCTTGCAGTCTCTTCGTCTCACTATTCTTCATCTCAATGTCACTCACTTCCATCCATTGGTTCTTTACTCCATTAGCCTCAAGGTTGAAGAAGGATGCCAACTGAGATCAGTAGATGACATAGCAGCAGCAGCACATCATATGGTGAGAATAATTGAGGAAGAAGCTATGTTGTGTTAA 963 41.64 MSLDALSSNDLFNFIIYDTISATPNTSQGHRDLSSENTFFSDDKCLKLHQDHHDDQHGFEEGRAPKPNSRKRRSSEVESNPSQQGKKKRKRKPKVCKNKEEAETQRMTHIAVERNRRKQMNEHLSVLRSLMPESYVQRGDQASIVGGAVEFVKELEHLLSTLEAKKLQILQQEAVLDKDQQENNEELLDNSAARSRKLFSISAPFATLLMHSNSDQNCSSTKYTSKSKASSAEIEVTLIETHANLRILSTKTHRQLLKLIAGLQSLRLTILHLNVTHFHPLVLYSISLKVEEGCQLRSVDDIAAAAHHMVRIIEEEAMLC 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 68896549 68899887 - Hsped.06g17820.1 Hepe06g1782 573157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1782 320 MobiDBLite consensus disorder prediction 51 77 - -
Hepe06g1782 320 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 104 155 IPR011598 GO:0046983(InterPro)
Hepe06g1782 320 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 103 171 IPR036638 GO:0046983(InterPro)
Hepe06g1782 320 Gene3D - 96 174 IPR036638 GO:0046983(InterPro)
Hepe06g1782 320 PANTHER MAX DIMERIZATION, MAD 70 312 - GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Hepe06g1782 320 Pfam Helix-loop-helix DNA-binding domain 105 156 IPR011598 GO:0046983(InterPro)
Hepe06g1782 320 MobiDBLite consensus disorder prediction 51 107 - -
Hepe06g1782 320 SMART finulus 110 161 IPR011598 GO:0046983(InterPro)
Hepe06g1782 320 Coils Coil 152 172 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g2107 Hepe-Chr5:71655365 Hepe06g1782 Hepe-Chr6:68896549 3.69e-49 dispersed
Hepe06g1782 Hepe-Chr6:68896549 Hepe10g0469 Hepe-Chr10:5422246 1.37e-63 dispersed
Hepe06g1782 Hepe-Chr6:68896549 Hepe05g1757 Hepe-Chr5:67888506 3.36e-38 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55836 PF00010 HLH 1.10E-10 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1782 - - - 0.0