Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1797 ATGTATGGGGATTGCCAAGTGATGTCAAGCAATATGGGAGGAAACATGGTTTCCTCTGAATCTCTCTTCTCTTCTCCCATTCAAAACCCTAATTTCAACTTCATCTCCAATTTCCAACATTTTCCCTCCATTGTACCTAAGGAGGAAAATGGGTTGATGAGAGGGAAAGAAGATATGGAAAGTGGGTCTGGAAGTGAACAAATTGTTGAAGAAAATCAAGGAATTGAAATGGAGAGTAATGATAATATTTCTCAGCAAAATCAGAAGAAAAAACGCTATCATAGGCATACTGCTCGCCAGATCCAAGAAATGGAAGCTTTGTTTAAGGAATGTCCACACCCAGATGACAAGCAGAGGCTAAAACTCAGCCAAGAACTTGGCCTCAAACCTCGCCAAGTCAAGTTTTGGTTCCAAAATCGCAGAACTCAAATGAAGGCACAACAAGACAGATCTGATAATGTGATTCTTAGGACTGAAAATGATACCTTAAAGAATGAGAATTATAGACTGCAAAGTGCCCTAAGAAGCATCATATGCCCTAGCTGTGGAGGGCAAGGTATCCTAGGAGAGCCAAGCTTGGATGAACAGCAGCTTCGTCTTGAGAATGCTAGACTTAGAGAACAGTTAGAACAAGTTTGTTCCTTGACCTCAAGATACACTGGTCGCTCAATCCAAGGGATGGCCTCCACTGGTCCTCTCATGCAACCATCTTTGGATTTGGACATGAACATATACTCAAGGCAATACACAGAGGCCATGGTTTCATCCTCCGAAATGATGCCGCTGCCATCAATGCTCCCGCCCGACGCCGCCCACTTCCCGGAGGGCGGCCTGTTAATTGAAGAGGAGAAGACACTTGCAATGGACCTCGCTGTGTCGTCCATGGCTGAACTTGTGAAGATGTGTCGCTCGACCGAGCCTCTTTGGATTCGAGATAGCGAGAGCGGTAAGGAAGTTCTAAATGTAGAAGAGCATGCTAGGATGTTTCCATGGCCGTTGAACCTCAAGCAACACTTGATAAGTGAGTTTAGGACTGAAGCGACCCGTGAGAGCGCCGTTGTTATAATGAATAGCATCACTCTTGTCGATGCCTTCCTCGACTCTAACAAATGGATGGAGTTATTTCCTTCAATTGTGGCCAAAGCAAAAACTGTACAAGTAATTTCATCAAGTGTTTCAGGCCATGTCAGTGGTTCCCTTCAGCTGATGTATGCAGAACTTCAGACCCTTTCTCCTCTAGTTCCGACGAGAGAAGCGCATTTCCTCCGGTGCTGCCAACAGAACGCCGATGAAGGAAGCTGGGCGATCGTTGATTTTCCGATCGATAGCTTTCACGACAGTCTTCAGCACTCGTTTCCCAGATACAGGAGAAGGCCCTCTGGCTGCATTATCCAAGATATGCCCAATGGATATTCTAGGGTTACATGGGTGGAGCATGCAGAAATAGAAGAGAAGCCAATCCATCAAATATTCAATCACTTTGTGCATAGTGGAATGGCTTTTGGTGCACATCGTTGGTTGGCTATCTTACAAAGACAATGCGAGAGAATTGCAAGTCTCATGGCTAGAAATATTTCTGACCTTGGAGTGATACCTTCACCAGAAGCAAGACAAAACCTAATGAAGCTGGCTCAAAGAATGATCAGAACTTTCTCCCTCAACATAAGCACCTCGGGCGGCCAGTCGTGGACCGCGTTATCCGATTCTCCCGACGATACCGTCCGAATAACCACTCGAAAAATCGTCGAGCCTGGTCAACCTAATGGGGTTATTCTCAGCGCTGTCTCCACCACTTGGCTTCCCTATCCTCACTACCGAGTCTTCGATCTTCTGCGAGACGAACGACGTCGATCTCAGCTGGAGGTTCTTTCCAATGGGAATTCGTTGCACGAGGTGGCTCACATTGCTAATGGCTCCCACCCTGGAAATTGCATCTCTCTTCTTCGTATCAATGTGGCCAGCAATTCCTCCCAGCATGTTGAGCTGATGCTGCAGGAGAGCTGCACGGACCAGTCCGGCAGCCTCGTCGTCTACGCGACGATCGACGTTGATTCGATTCAGTTAGCCATGAGTGGAGAAGACCCCTCCTGCATTCCCCTCCTCCCCATAGGGTTTTCCATCGTCCCCGTCGACGGACACCCCGCACCGCCATCCGAGGACGACGGTGTCACTAATTCTGCAGTCAACTCCGGCTGCCTCCTTACCGTTGGCCTTCAAGTTCTAGCCAGCACCATTCCATCGGCAAAGCTCAACCTATCTAGCGTAACCGCCATCAACAACCACCTCTGTAACACGGTGCACCAAATCAACGCTGCTCTCGGCAGCCCAACTCATCCCGACAACGGCAATGCCGTCACCGAGTTGAAAACTGAACCGCCGCAGCCGCCGCCGTCATCAAAGCATTAA 2406 48.25 MYGDCQVMSSNMGGNMVSSESLFSSPIQNPNFNFISNFQHFPSIVPKEENGLMRGKEDMESGSGSEQIVEENQGIEMESNDNISQQNQKKKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQDRSDNVILRTENDTLKNENYRLQSALRSIICPSCGGQGILGEPSLDEQQLRLENARLREQLEQVCSLTSRYTGRSIQGMASTGPLMQPSLDLDMNIYSRQYTEAMVSSSEMMPLPSMLPPDAAHFPEGGLLIEEEKTLAMDLAVSSMAELVKMCRSTEPLWIRDSESGKEVLNVEEHARMFPWPLNLKQHLISEFRTEATRESAVVIMNSITLVDAFLDSNKWMELFPSIVAKAKTVQVISSSVSGHVSGSLQLMYAELQTLSPLVPTREAHFLRCCQQNADEGSWAIVDFPIDSFHDSLQHSFPRYRRRPSGCIIQDMPNGYSRVTWVEHAEIEEKPIHQIFNHFVHSGMAFGAHRWLAILQRQCERIASLMARNISDLGVIPSPEARQNLMKLAQRMIRTFSLNISTSGGQSWTALSDSPDDTVRITTRKIVEPGQPNGVILSAVSTTWLPYPHYRVFDLLRDERRRSQLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQHVELMLQESCTDQSGSLVVYATIDVDSIQLAMSGEDPSCIPLLPIGFSIVPVDGHPAPPSEDDGVTNSAVNSGCLLTVGLQVLASTIPSAKLNLSSVTAINNHLCNTVHQINAALGSPTHPDNGNAVTELKTEPPQPPPSSKH 801
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 69021519 69028672 + Hsped.06g17970.1 Hepe06g1797 573172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1797 801 ProSiteProfiles 'Homeobox' domain profile. 87 147 IPR001356 GO:0003677(InterPro)
Hepe06g1797 801 MobiDBLite consensus disorder prediction 773 788 - -
Hepe06g1797 801 SUPERFAMILY Bet v1-like 553 770 - -
Hepe06g1797 801 Coils Coil 195 215 - -
Hepe06g1797 801 SMART HOX_1 88 151 IPR001356 GO:0003677(InterPro)
Hepe06g1797 801 SUPERFAMILY Bet v1-like 282 518 - -
Hepe06g1797 801 Pfam Homeodomain 90 145 IPR001356 GO:0003677(InterPro)
Hepe06g1797 801 SUPERFAMILY Homeodomain-like 78 148 IPR009057 -
Hepe06g1797 801 Gene3D - 75 158 - -
Hepe06g1797 801 CDD START_ArGLABRA2_like 284 515 - -
Hepe06g1797 801 MobiDBLite consensus disorder prediction 773 801 - -
Hepe06g1797 801 ProSitePatterns 'Homeobox' domain signature. 122 145 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Hepe06g1797 801 Gene3D - 322 514 IPR023393 -
Hepe06g1797 801 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 81 773 IPR042160 -
Hepe06g1797 801 Pfam START domain 291 516 IPR002913 GO:0008289(InterPro)
Hepe06g1797 801 FunFam Homeobox-leucine zipper protein HDG1 76 163 - -
Hepe06g1797 801 CDD homeodomain 90 148 IPR001356 GO:0003677(InterPro)
Hepe06g1797 801 ProSiteProfiles START domain profile. 280 519 IPR002913 GO:0008289(InterPro)
Hepe06g1797 801 SMART START_1 289 516 IPR002913 GO:0008289(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1797 Hepe-Chr6:69021519 Hepe07g2556 Hepe-Chr7:70005103 5.81e-226 dispersed
Hepe06g1797 Hepe-Chr6:69021519 Hepe02g0212 Hepe-Chr2:2108993 7.09e-200 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55839 PF01852 START 4.80E-45 CL0209 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1797 - - - 0.0