Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1799 ATGGAGTTATTTCCAGCACAGCCAGATTTGTCACTTCAAATTAGTCCTCCAAATACAAATAAACCCTCTTCCACTTGGAGAAGAACAACATCCTCACAAGAAGAAGTTGTTGATTTGGGGTTTTGGAATAATCTCACTTTGGAGTCCTCTAAATCCACTCCTAAACACCACCCTAATCTTCATAATCACTCTTATTTTGACCTCTCTCTCTCAAACTTCACCCAAATTAACCATCATCAATATCCTAATAATATTGCTCCTCCAAATCATCATCATCTTCATCATCTTCATCCTCATCACCATCACCATCCCGCTCTCAATAGCGGTGCTCACCTTTTCGAAACCCTAAACAAAACCCACCACCACCACCGACCCGCTGCGATTTTCCACCACAATCCACCGTCGCCGCTCGAGCCTCCACCGCCGCCCCCGTTCCCAGGGCAGACGAATGGGCAAGACTTGGGCTTTTTGCGACCCATTAGAGGAATTCCGGTGTACCATCATCAGCCAACAATTAACCCCGCCGGCAACAGCGGCGCCGTCGCTTCCTCCGCCGCCGGCCACGGCCAGATTATGATGCGATCGAGATTCTTGTCTAGGTTTCCGGCCAAACGAAGCATGAGAGCCCCAAGGATGAGATGGACTTCCACTCTTCATGCTCGCTTTGTTCATGCTGTTGAACTCCTCGGTGGCCATGAAAGAGCTACGCCCAAGTCGGTTCTCGAGCTTATGGATGTCAAAGATCTAACCTTGGCCCATGTCAAATCTCATTTACAGATGTACCGTACAGTGAAGACCACAGACAGAGCAGGAGCTTCTTCAGGCCAATCAGATTTATATGAAAATGCTTCATCTGGGGACACAAGTAATATAGAAGATATAATATTTGACATTCAAAAGCCAACCATTGGAAGGCAAAATGATCACTCACCAGTTCAACAAACAAGGCAAAACCCTCATCAAGATAAGGAATACCATGCCCTGTGGAGCAATTCTTCAAGGGAAGCTTGGTTGCATGGTTTGCCTAATGATTCTTCTAAGGACCTTTCTTCGTCGCTCGAGAATGATATGGATCCAAAGTGCTCAAACAATGAGAGACTATCAGAAATAAGCTCATCAGCAGATCTTTGTGGAGTGACAAATAATCCTCAGAAACCTAATTTGGAATTCACATTAGGAAGGTCAATTTGA 1191 45.59 MELFPAQPDLSLQISPPNTNKPSSTWRRTTSSQEEVVDLGFWNNLTLESSKSTPKHHPNLHNHSYFDLSLSNFTQINHHQYPNNIAPPNHHHLHHLHPHHHHHPALNSGAHLFETLNKTHHHHRPAAIFHHNPPSPLEPPPPPPFPGQTNGQDLGFLRPIRGIPVYHHQPTINPAGNSGAVASSAAGHGQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAGASSGQSDLYENASSGDTSNIEDIIFDIQKPTIGRQNDHSPVQQTRQNPHQDKEYHALWSNSSREAWLHGLPNDSSKDLSSSLENDMDPKCSNNERLSEISSSADLCGVTNNPQKPNLEFTLGRSI 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 69069954 69074074 + Hsped.06g17990.1 Hepe06g1799 573174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1799 396 MobiDBLite consensus disorder prediction 1 31 - -
Hepe06g1799 396 Pfam Myb-like DNA-binding domain 211 262 IPR001005 -
Hepe06g1799 396 MobiDBLite consensus disorder prediction 303 318 - -
Hepe06g1799 396 FunFam Myb family transcription factor 208 266 - -
Hepe06g1799 396 MobiDBLite consensus disorder prediction 11 31 - -
Hepe06g1799 396 NCBIfam myb-like DNA-binding domain, SHAQKYF class 210 263 IPR006447 GO:0003677(InterPro)
Hepe06g1799 396 SUPERFAMILY Homeodomain-like 207 263 IPR009057 -
Hepe06g1799 396 Gene3D - 209 266 - -
Hepe06g1799 396 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 6 395 IPR044847 GO:0000976(PANTHER)|GO:0000976(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006355(PANTHER)|GO:0010158(InterPro)
Hepe06g1799 396 MobiDBLite consensus disorder prediction 302 323 - -
Hepe06g1799 396 MobiDBLite consensus disorder prediction 340 366 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1799 Hepe-Chr6:69069954 Hepe10g0690 Hepe-Chr10:9119845 2.71e-33 dispersed
Hepe02g1065 Hepe-Chr2:13232856 Hepe06g1799 Hepe-Chr6:69069954 1.09e-48 transposed
Hepe02g2403 Hepe-Chr2:69626014 Hepe06g1799 Hepe-Chr6:69069954 7.61e-33 transposed
Hepe07g2334 Hepe-Chr7:67687470 Hepe06g1799 Hepe-Chr6:69069954 7.62e-34 transposed
Hepe06g0993 Hepe-Chr6:57694093 Hepe06g1799 Hepe-Chr6:69069954 1.30e-82 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55841 None None None None Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1799 - - - 0.0