Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1813 ATGGCACGGTTCCTAAATGATCACTTCAGTTTTCTTACGCCAGAAATCGAGACTGTGCAGACTAAAATAATTCCTCGCTCTGAACACCCCAACAAGCATCCTGATTGGTTTTCACCAGATACAGGAATCTGTCGTAGTCGTCATGCCTCCAGAGACTTGCCCTCTGACCCATTTCTCGATGTCGTCTCCTTCATCTTCTCCTTCCAACACAATGGACATTCAGCTTACATTGATTCCTCAACTGGACGTTCAATATCTTACAGAGAATTGTACCGTATGGCCAAGTCCGTGGCTTCGGGTCTCCACAAGATTGGTATTTCAAAAGGGGATGTAGTTTTGCTTATGGTACCAAATTCCATTTTCTATCCCATTGTTCTTTTGGGTGTTATGTATTTGGGAGCAGTTGTTACGACCATGTTTCCTCAAAGTAGTTCCTCAGAAATCAAGAAACGAACGAGCGATTGCAATGTGCGTCTGGCTTTTGCAATACCTCAGAAAGTTGAGATTTTTGAAGCATTGGGAGTCCAGGCAATTGGGGTTCCAGAAAATGTGAATTTGGACTTGATGAAGCCTATGGGATTTTCTTCTTTTTATGAGCTTATTTCAGGTGGTTATCATTTGAATAAAAGACCAGTGATTAAACAGCAAGATACAGCTGCTATATTATATTCTTCAGGTACTACAGGAGTGAGCAAAGGGGTTATGCTGTCCCACAGAAATTTTATATCTATGATCGAGCTTTTCGTCCGGTTTGAAGCTTCACAGTATCAATATTCGAGTACAGAGAACGTGTATTTAGCTGCTGTACCGATGTTTCATATATACGGTCTCTCTCTTTTTGTGTTGGGATTAATGTCATTGGGCTCTAGTGTTGTTGTAATGAGCAAATTTGATATCAAAGAGGTGGTCAACGCCATTGATAGATTTAAAGTCACACATTTTCCAGTTGTTCCACCAATAATGACAGCTCTGGCTAAGACTGCAGAGAAAGTTGGTGTACATAGATTTCGGAGTTTGAAACAAGTTTCTTGTGGGGCTGCTGCTTTGAGCAAGAAGACCATTGGGGAGTTTGTGCAGGCTTTCCCTCATGTTGACTTCATTCAGGGATATGGCATGACTGAGTCCACAGCTGTAGGAGCTCGTGGCTTCAATACCAAAAAGGCTCAAAATTATGTGTCAGTGGGACTTTTAGCTCCAAACATGGAAGCTAGAGTAGTTGATTTGGTTAGCGGTTCTTGCGTGCCTCCCGGTAAAACTGGCGAGCTTTTGTTACGCGGACCTGGTTCAATGAAAGGGTACTTGAATAATCCAGAGGAAACTATGTCCATAATCGACCAAGAAGATTGGTTACATACTGGAGACATTGTCTACTTTGACCAAGAAGGATACTTATATGTTGTTGATCGTTTGAAGGAGGTTATAAAATATAAAGGCTTTCAGGTTGCTCCAACTGATTTAGAATCTGTGGTGATCACACATCCAGAAGTTCTTGAGACTGCAGTAACAGCGGCCAGTGATGAAGAATGTGGGGAAATTCCAGTAGCATTTGTCGTCAAGAAGCCAGGAAGCAAACTCTCACAGAAAGATCTAATAGATTATGTTGCTCAACAGGTTGCGCCATATAAAAAAGTCAGAAAAGTGGTTTTTACAGAAGCGATACCGAAGTCTGCTACTGGCAAAGTGCTGCGCAGGGAACTGGGGAAGCACCTGGCTTCTAAACTCTGA 1725 42.2 MARFLNDHFSFLTPEIETVQTKIIPRSEHPNKHPDWFSPDTGICRSRHASRDLPSDPFLDVVSFIFSFQHNGHSAYIDSSTGRSISYRELYRMAKSVASGLHKIGISKGDVVLLMVPNSIFYPIVLLGVMYLGAVVTTMFPQSSSSEIKKRTSDCNVRLAFAIPQKVEIFEALGVQAIGVPENVNLDLMKPMGFSSFYELISGGYHLNKRPVIKQQDTAAILYSSGTTGVSKGVMLSHRNFISMIELFVRFEASQYQYSSTENVYLAAVPMFHIYGLSLFVLGLMSLGSSVVVMSKFDIKEVVNAIDRFKVTHFPVVPPIMTALAKTAEKVGVHRFRSLKQVSCGAAALSKKTIGEFVQAFPHVDFIQGYGMTESTAVGARGFNTKKAQNYVSVGLLAPNMEARVVDLVSGSCVPPGKTGELLLRGPGSMKGYLNNPEETMSIIDQEDWLHTGDIVYFDQEGYLYVVDRLKEVIKYKGFQVAPTDLESVVITHPEVLETAVTAASDEECGEIPVAFVVKKPGSKLSQKDLIDYVAQQVAPYKKVRKVVFTEAIPKSATGKVLRRELGKHLASKL 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 69210885 69219329 - Hsped.06g18130.1 Hepe06g1813 573188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1813 574 FunFam Long-chain-fatty-acid--CoA ligase FadD 48 471 - -
Hepe06g1813 574 Gene3D - 472 573 IPR045851 -
Hepe06g1813 574 CDD 4CL 53 566 - -
Hepe06g1813 574 FunFam 4-coumarate--CoA ligase 2 472 573 - -
Hepe06g1813 574 Pfam AMP-binding enzyme C-terminal domain 486 560 IPR025110 -
Hepe06g1813 574 Pfam AMP-binding enzyme 70 434 IPR000873 -
Hepe06g1813 574 SUPERFAMILY Acetyl-CoA synthetase-like 69 571 - -
Hepe06g1813 574 ProSitePatterns Putative AMP-binding domain signature. 221 232 IPR020845 -
Hepe06g1813 574 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 37 566 - GO:0005777(PANTHER)|GO:0006744(PANTHER)|GO:0016405(PANTHER)
Hepe06g1813 574 Gene3D - 44 471 IPR042099 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2476 Hepe-Chr2:71233207 Hepe06g1813 Hepe-Chr6:69210885 5.84e-18 dispersed
Hepe06g0879 Hepe-Chr6:55923726 Hepe06g1813 Hepe-Chr6:69210885 6.56e-22 dispersed
Hepe06g1813 Hepe-Chr6:69210885 Hepe07g2135 Hepe-Chr7:65667156 7.78e-122 dispersed
Hepe01g1063 Hepe-Chr1:75353911 Hepe06g1813 Hepe-Chr6:69210885 7.85e-131 transposed
Hepe01g2324 Hepe-Chr1:87826885 Hepe06g1813 Hepe-Chr6:69210885 1.92e-155 transposed
Hepe05g0275 Hepe-Chr5:3364903 Hepe06g1813 Hepe-Chr6:69210885 3.24e-127 transposed
Hepe06g1813 Hepe-Chr6:69210885 Hepe08g1122 Hepe-Chr8:11201392 6.15e-99 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1813 K01904 - csv:101219578 919.842