Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1825 ATGTCCCTCCTCAGTAGATTCTTTTACAGAAGACCCCCAGATGGGTTGCTGGAGTTTGTTGAACGAGTGTATATTTTTGATTCTTGCTTTTCCACTGAAGTATTGCCCGATGGTATGTACCAAATTTATCTGCATGAAATTATAAACGAATTACATGAAGAATTCCCAGACTCCTCCTTCCTTGCATTTAATTTTCGCGAAGGAGAGAAAAGGAGCCAATTTGCAGAAATGCTGCGTGAGTATGATGTCACTGTGATGGATTATCCTCGACAATATGAAGGTTGCCCTCTTCTTCCACTTTCCTTAATACAGCACTTCCTCCGTGTTTGTGAAAGTTGGCTTCTGCTTGGTAACCAACAAAATGTCATTCTTCTCCACTGTGAGAGGGGAGGTTGGCCACTCTTAGCATTTCTTTTGGCTAGCTTTTTGATATTTAGAAAACTGCACAGTGGTGAGAGGAAAACTCTTGAAATTGTACATCGAGAAGCTCCCAAAGGGTTTTTACAGCTCTTGTCACCATTAAATCCATTTCCATCTCAGCTCCGCTACTTGCAATATGTTGCAAGGAGAAATATAGTCTCTGAGTGGCCACCGCCCGAGCGAGCACTTTCTTTAGATTGTGTAATTCTTCGTGGCATTCCGGGTTTTGATTCTCAGAATGGCTGTCGACCAGTTATTCGTATTTTCGGGAGGAATCTTTTTAGTAAGGGTGGGCTTTCCACACAAATGATTTTCTCCATGCCCAAGAAGAACAAGGCCCTCCGTCACTACCGTCAGGCAGACTGTGATGTGATTAAAATGGACGTGCAGTGTTTGGTTCAAGGAGATGTAGTGTTGGAGTGTTCACATTTGGAATCGGAACCAGAAAGGGAAGTTATGATGTTTCGTATTATGTTCAATACAGCATTTATTCGATCAAACATCATGATGCTAACCTCTGAGAATTTAGACATTCTTTGGGATTCAAAGGAGCGTTATCCAAAAGGCTTTCGAGCTGAGGTTTTGTTTGGAGAGATGGAAAGCATCTCCCCTCCAAGGGCTCCAACCACAATTTTGAATGGTGAAGAGAAAGGTGGATTACCAATTGAAGCTTTTTCCAGGGTTCAAGAACTTTTTAGTGGTGTCGAGTGGTTTGATAGCAATGATGATGCTGCCTTGTGGCTACTCAAGAATCTATCTGCCTTGAGTGACGTGAAAGAATTGTCAAGATGGCAAAATAAAACAAGTTCATACTCCTCGCCAGGGGATTCTGAAGAGGAAAATAATACGTCTAGCACTGCTGATAGTTCAGATGAAGTATTTGATATAATTACAAAGCCTTTAGTTGATTCAACTTCTACCAATTTTACAATTCCAACTATGGTACATTCTTCTGAATTATTGTCCAGCAAGATTGATGCTAATGAAGTGAATATTTCATCAGAGTCTACTCAAACTTTTGATGAATGTCAAGACACGATCGTTTCGAATAAAGAATCTCTACTCTCTTCATCACCTCCTAAAAGTTCGTCTTTAATGTCACCGCCACTGTTGCCTCCATCTAATCTACCATCTACTAATGCTAGTGGGGAACTTGTCTCAAATAAAATGATACCCGATGTTAAAGTGATTCCTCCACCGCCACCGCCACCACCGCCACTTTTTTCTCTATCGCATAATGAACCTCATGTAAAAACTTCCATGAGTTCAGACTCGACCTCCATAACAATGCATGAGAGACCCCTTCCACCCCCTCCACCTCAATATCTCACTAGCAACAATCCCGTTACGACCTGTTTGATTCCTTCGGTTTCGCTTGTTCCTAAATCTTCTAGTGCTCCTCCACCCCCACCCCCACCTCCCCTTCCAAAAATTGTTGGTGTTCCACCACCACCTTCACCTCCCATTCCAAAATCTTTTGGTGTTCCTCCACCTCCACCTCCACCTCCTCCTCCTCCTCCTCCTCCTTTTGCTCCAAAATCTTCTAGTGCTCCTCCACCTCCGGTTCCAAAATCTTTTGGTGCTCCCCCACCTCCGCCTCCACCTCCTGTTCCAAAATCTTCTAGTGCTCCTCCACCTCCACCTCCACCTCCAAAGTCTTCTAGTGCTCCTCCCCCTCCCCCTCCACCTCCCCCTCCCATTTCAAAGTCTTCTAATGCTCCTCCACCTCCACCTCCACCTCCGCCTCCTATTTCAAAGTCTTCTAATGCTCCTCCACCTCCACCTCCGCCTCCTATTTCAAAGTCTACCAGTGCTCCTCCACCTCCACCTCCGCCTCCCATTTCAAAGTCTACCAATGCTCCTCCACCTCCACCTTCTTTTCCACAATCAAACCACGGTGGGACACCAGTTCCACCTCCTCCACCACCAAAACCTCCCGGCGTTCTACCAAGTCATGGTACTAAACCAATTGGACCTCCTCCACCCCCCCCACCATCAAAGCCCTTAAATGCTCATCCTCCGACAAGTCATGGTGCTACGCCAATGCCGCCCCCTCCCCCTGGATCAAAAGGGTCAAATGTAGCACCACCACCCCCTCCTTCTGTTGGAAGGGGGAAAGTTTCTCTAGGATCAACAACTCAAGGAAGAGGTCGAGTTGCTACGGGAGTTGTAAACGCTCCAAAGAAAACCACTTTAAAACCATTGCACTGGGTAAAAGTTACTCGAGCAATGCAAGGGAGTTTATGGGCTGACTCACAAAAGCAGGAAAATCAATCAAGGGCCCCAGAAATAGACATCTCTGAACTTGAAAGTCTATTCTCAGCAGCCTCTGCTTCTGATGGAAGCGGCAGCAAAGGTGGAGGACGACGTGGTTCCAACATCAACAAACCTGAAAAAGTGCAACTGATTGACTTGCGGAGAGCATATAACTGTGAAATAATGCTCTCAAAAATAAAGATTCCCTTGCCGGATATGATAAATTCAGTTCTTGCATTGGATTCTTCTGCCCTTGATATTGATCAGGTTGAAAATCTCATCAAGTTTTGTCCTACTAGGGAAGAGATGGAAACGTTGAAGAGTTATACAGGTGACAGAGAAATGCTTGGAAAGTGTGAGCAGTTTTTTCTCGAGCTAATGAAGGTCCCACGAATAGAATCCAAGTTACGAGTATTTGCTTTCAAAATCACCTTTTCTAGTCAGGTGAATGATTTGAGAAATAATTTGAAAACAATAAATGATGCTACAAGAGAGGTCAAAGAATCTGAAAAATTGCGTCAGATAATGCAAACAATTCTTACACTGGGAAATGCGCTGAACCAGGGTACTGCTCGAGGTTCGGCTATAGGTTTTAAGCTGGACAGTCTCCTTAAATTGTCTGACACTCGGGCAAGAAACAACAAAATGACTTTGATGCATTATTTATGTAAGCTCCTTGCAGAGAAAATGTCAGAGTTACTTGATTTTGACAAGGACCTTGTTCATTTAGAAGCTGCCTCTAAGATCCAATTGAAAGCATTGGCTGAAGAAATGCAAGCAGTGAGTAAAGGGCTTGAAAAAGTGGAGCAAGAGCTAGCTGCTTCGGAAAATGACGGAGCTATCTCTATTGGTTTCCAGAAGGTACTGAAGAATTTTCTTGATACTGCTGAAGCTGAAGTAAGGGCACTTATCTCCTTATATTCTGAAGTGGGGAGAAACGCAGATTCATTGTCCCAGTACTTTGGCGAGGATCCAGCACGGTGCCCCTTTGAGCAAGTGACTCAAATTTTGATAGTCTTCGTAAGGATGTTCAGGAAGTCACGTGAAGAAAATGAAAGGCAGGCTGATGCTGAAAAGAAAAAAATAGAGAAGGAAGCCATGAAAGAACGAAGCTCAGTTAAAGCGAAGTGA 3807 44.08 MSLLSRFFYRRPPDGLLEFVERVYIFDSCFSTEVLPDGMYQIYLHEIINELHEEFPDSSFLAFNFREGEKRSQFAEMLREYDVTVMDYPRQYEGCPLLPLSLIQHFLRVCESWLLLGNQQNVILLHCERGGWPLLAFLLASFLIFRKLHSGERKTLEIVHREAPKGFLQLLSPLNPFPSQLRYLQYVARRNIVSEWPPPERALSLDCVILRGIPGFDSQNGCRPVIRIFGRNLFSKGGLSTQMIFSMPKKNKALRHYRQADCDVIKMDVQCLVQGDVVLECSHLESEPEREVMMFRIMFNTAFIRSNIMMLTSENLDILWDSKERYPKGFRAEVLFGEMESISPPRAPTTILNGEEKGGLPIEAFSRVQELFSGVEWFDSNDDAALWLLKNLSALSDVKELSRWQNKTSSYSSPGDSEEENNTSSTADSSDEVFDIITKPLVDSTSTNFTIPTMVHSSELLSSKIDANEVNISSESTQTFDECQDTIVSNKESLLSSSPPKSSSLMSPPLLPPSNLPSTNASGELVSNKMIPDVKVIPPPPPPPPPLFSLSHNEPHVKTSMSSDSTSITMHERPLPPPPPQYLTSNNPVTTCLIPSVSLVPKSSSAPPPPPPPPLPKIVGVPPPPSPPIPKSFGVPPPPPPPPPPPPPPFAPKSSSAPPPPVPKSFGAPPPPPPPPVPKSSSAPPPPPPPPKSSSAPPPPPPPPPPISKSSNAPPPPPPPPPPISKSSNAPPPPPPPPISKSTSAPPPPPPPPISKSTNAPPPPPSFPQSNHGGTPVPPPPPPKPPGVLPSHGTKPIGPPPPPPPSKPLNAHPPTSHGATPMPPPPPGSKGSNVAPPPPPSVGRGKVSLGSTTQGRGRVATGVVNAPKKTTLKPLHWVKVTRAMQGSLWADSQKQENQSRAPEIDISELESLFSAASASDGSGSKGGGRRGSNINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMINSVLALDSSALDIDQVENLIKFCPTREEMETLKSYTGDREMLGKCEQFFLELMKVPRIESKLRVFAFKITFSSQVNDLRNNLKTINDATREVKESEKLRQIMQTILTLGNALNQGTARGSAIGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMSELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELAASENDGAISIGFQKVLKNFLDTAEAEVRALISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILIVFVRMFRKSREENERQADAEKKKIEKEAMKERSSVKAK 1268
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 69318397 69329353 + Hsped.06g18250.1 Hepe06g1825 573200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1825 1268 Pfam C2 domain of PTEN tumour-suppressor protein 198 338 IPR014020 -
Hepe06g1825 1268 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Hepe06g1825 1268 MobiDBLite consensus disorder prediction 534 550 - -
Hepe06g1825 1268 Coils Coil 1143 1170 - -
Hepe06g1825 1268 MobiDBLite consensus disorder prediction 915 935 - -
Hepe06g1825 1268 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 19 187 IPR029021 -
Hepe06g1825 1268 ProSiteProfiles Formin homology-2 (FH2) domain profile. 862 1262 IPR015425 -
Hepe06g1825 1268 MobiDBLite consensus disorder prediction 553 570 - -
Hepe06g1825 1268 SMART it6_source 500 1268 IPR015425 -
Hepe06g1825 1268 Gene3D - 197 342 - -
Hepe06g1825 1268 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Hepe06g1825 1268 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Hepe06g1825 1268 PANTHER FORMIN-J 758 1260 IPR051144 -
Hepe06g1825 1268 MobiDBLite consensus disorder prediction 915 929 - -
Hepe06g1825 1268 MobiDBLite consensus disorder prediction 585 601 - -
Hepe06g1825 1268 MobiDBLite consensus disorder prediction 492 867 - -
Hepe06g1825 1268 MobiDBLite consensus disorder prediction 602 843 - -
Hepe06g1825 1268 Gene3D Formin, FH2 domain 864 1248 IPR042201 -
Hepe06g1825 1268 MobiDBLite consensus disorder prediction 407 430 - -
Hepe06g1825 1268 Pfam Formin Homology 2 Domain 867 1236 IPR015425 -
Hepe06g1825 1268 SMART PTEN_C2_2 198 338 IPR014020 -
Hepe06g1825 1268 Coils Coil 1041 1061 - -
Hepe06g1825 1268 Coils Coil 1237 1260 - -
Hepe06g1825 1268 FunFam Formin-like protein 861 1248 - -
Hepe06g1825 1268 SUPERFAMILY Formin homology 2 domain (FH2 domain) 875 1256 - -
Hepe06g1825 1268 MobiDBLite consensus disorder prediction 1240 1268 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1825 Hepe-Chr6:69318397 Hepe09g0582 Hepe-Chr9:5428963 2.33e-285 dispersed
Hepe06g1825 Hepe-Chr6:69318397 Hepe07g2489 Hepe-Chr7:69234715 2.51e-230 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1825 K28090 - csv:101217517 1003.43