Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1849 ATGGGTAGCCGCTCGGTGTTCACTTTGGCTGAGGTTGCCTCCCACGACAATCGCAACGACTGTTGGTTGATCATTGAGGACAAGGTATACGATGTAACAAAGTTCCTCGAAGACCATCCTGGTGGTGATGAAGTCTTGTTGTCAGCCATTGGTAAGGATGCAACCAATGATTTTTTCGACGTCGGGCACAGTAGCACTGCTAGAGCAATGATGGAAGAATTTTACGTAGGCGATATCGATAGCTCGACTATTCCTGCAAATAGAAAGTACACTCCTCCAAAGCAGCCCCTCTACAACCAAGACAAGACACCGGAATTCCTTATCAAGGTCCTTCAGTTTCTAGCTCCCCTGGTAATTTTGGGTTTGGCTTTTGGCATCCACATATATACCAAAACGACTTAG 402 46.27 MGSRSVFTLAEVASHDNRNDCWLIIEDKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFFDVGHSSTARAMMEEFYVGDIDSSTIPANRKYTPPKQPLYNQDKTPEFLIKVLQFLAPLVILGLAFGIHIYTKTT 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 69606242 69610906 - Hsped.06g18490.1 Hepe06g1849 573224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1849 133 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Hepe06g1849 133 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
Hepe06g1849 133 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 90 IPR036400 -
Hepe06g1849 133 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037(InterPro)
Hepe06g1849 133 Gene3D - 2 85 IPR036400 -
Hepe06g1849 133 FunFam Cytochrome b5 type B 2 84 - -
Hepe06g1849 133 PANTHER CYTOCHROME B5 5 127 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Hepe06g1849 133 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Hepe06g1849 133 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Hepe06g1849 133 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Hepe06g1849 133 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Hepe06g1849 133 SMART Cyt_b5_2 7 80 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g2053 Hepe-Chr5:71018579 Hepe06g1849 Hepe-Chr6:69606242 1.84e-36 dispersed
Hepe06g0817 Hepe-Chr6:54970997 Hepe06g1849 Hepe-Chr6:69606242 2.57e-56 dispersed
Hepe06g1849 Hepe-Chr6:69606242 Hepe10g0572 Hepe-Chr10:6854369 1.05e-31 dispersed
Hepe08g2621 Hepe-Chr8:68185730 Hepe06g1849 Hepe-Chr6:69606242 2.07e-21 transposed
Hepe03g0349 Hepe-Chr3:5042167 Hepe06g1849 Hepe-Chr6:69606242 3.86e-59 wgd
Hepe05g1755 Hepe-Chr5:67866386 Hepe06g1849 Hepe-Chr6:69606242 1.43e-65 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1849 K23490 - csv:101212882 259.225