Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1881 ATGCCTTTCTCGATTTTGCACCTTCTTCTGGTTCTTCATGCAGTCGATTTGCTTTTCTCTTGCTCAGGACAATCTTCACCACACATATACTTATCTCCTTCCTTACAGCCAAACCTGCAAACAACAATGACAGAAATGTCAACAGAGCATGCAAGGTTGGAGTCAACGAGTTTTTCATTCGTGCCTTCAAAGTTACATGGCAACTGGATATTTAAGTCTTCTTCGGGACCATCCAATGCTCCTGCACCTTCTCCAGGTCCTAGGAGTGCACCCTTACCAATCCGACATCATCGACGGCGTCGTGTACGACCTCACGTGGTTGCTCCTACCCCATCAAAAGACCAAGGCTGTGATCAAATATGCATGGAGCCCCTTACTGCGGCTCCCTTTGGTTCACCTTGTGGCTGTGTGTTTCCCATGAAAGTCAGACTTCTTCTGGATATAGCTCCGTATGCTGTTTTTCCTGTGATGAATGAGCTTGAAATCGAGATTGCAGAGGGGACTTACTTGGAGCAGAGCCAAGTGAAAATCATGGGTGCAAGTGCGGATAGTCAAAATCAAGGAAGAACTATGGTGGATATAAATTTAGTACCTCTAGGAGAGAAGTTTGATAATACCACTGCAGTACTGACTTACAGAAGGTTTTGGGACAAAAAAGTGCATCTAAATATGACGCTTTTTGGTGATTATGAAGTTGTCTACATCAGCTATCCAGGGATTTCTTCTTCACCGTCATATGGAGGGTACATGGGAAGTGGTCCTAGTGGAAGTACTGGAGATCTTCCCATTACTGCAAATTTTGTTAATAAGAGCCAGAAGATGAATGTCAAAACAATTGCCATCATAGCACTTTCAGCATTTGTCGTGTTATTAGTGTTCATTGGAGCTCTTTCCATCTTTTTGAAATGGAGAAAGGTTGGCAGACCATCTAGTGCTGTTGGCCCTGTCTTCACGTCATCAATTAACAAAAGATCTGGTCTAGGATCAGGCTTATCAAGTAGCATTGCAAGCTCCACCTCCATTTCCCTAATTTCCACAATGCCAACCAGTCTTCAATCTGTTAAAACATTTTCACTTTCAGAACTTGAGAAAGCAACAGACAAGTTTAGTTCAAAAAGGATTTTAGGTGAAGGGGGATTTGGCCGAGTTTACTTTGGTATTTTGGAAGATGGAAATGAAGTTGCAGTTAAGTTGCTTACAACACGGGATAATCAGAATCGAGACCGTGAATTTATTGCAGAAGTTGAGATGTTGAGTAGACTGCATCATCGGAATCTTGTGAAACTGATTGGGATATGCATTGAAGGGCGAACTCGCTGCTTAGTTTATGAGCTGGTCCATAATGGCAGCGTCGAGTCCCACTTGCATGGCATTGACAAGAGAAAAAGACCCCTTGACTGGGACGCACGGTTAAAGATTGCTCTTGGAGCAGCAAGAGGTTTGGCATATCTTCATGAAGATTCTAATCCCCGTGTAATTCACCGTGATTTCAAAGCAAGTAATGTTCTGTTGGAAGTTGATTTCACCCCCAAGGTTTCGGATTTCGGATTGGCTAGGGAAGCAACTGAAGGAAGTGAACATATCTCAACACGGGTCATGGGAACTTTCGGGTACGTAGCCCCTGAATATGCAATGACAGGGCATCTGCTCGTCAAGAGTGATGTTTACAGTTATGGAGTCGTGCTACTTGAGCTTCTTTCGGGGAAAAAACCGGTGGACATGTCCCAACCACATGGCGAGGAGAACCTCGTAACATGGGCTCGGCCTCTACTGACTAGTAGGGAAGGTTTGGAGCAACTAGTAGATCCTTCTCTAGCTGGTAGTTACGACTTTGACGACATGGCCAAGGTGGCTGCCATTGCTTCTATGTGCGTTCATCCAGAGGTGACCCAGAGGCCATTTATGGGAGAAGTTGTGCAGGCTCTAAAGCTGATGTACAACGACACAGACGAGACGTGCGCAGACTACTGCAGTCAAAAGGAGTCCTCTGCTCGGGACTCGGACTTTAAAGGCGATCTTGTGCCATCAGATAGCAGTTGGTGGAATGCTGGTGGCCTTACACCTCGACTGACATTCGGGCAAGCCTCTTCCTTCATCACCATGGAATACAGCTCTGGCCCTCTTGAAGATATGGAAAACCGTCCGTTTTCAACTTCAAGTTTGGTAGGCGACGAGATATCTTTGCCTATTCGGCATGGAAACAGGTCAGGTCCCTTACGAACCGCTCGAAGCAAGCCTGCCTTCTATAGATTTTCGGGAAGTAGGAGTGAGCACGGAGGACTTCTTTCAAGGCCTTCTTGGAACAGTGGGTTTTGGGTTTGA 2322 45.52 MPFSILHLLLVLHAVDLLFSCSGQSSPHIYLSPSLQPNLQTTMTEMSTEHARLESTSFSFVPSKLHGNWIFKSSSGPSNAPAPSPGPRSAPLPIRHHRRRRVRPHVVAPTPSKDQGCDQICMEPLTAAPFGSPCGCVFPMKVRLLLDIAPYAVFPVMNELEIEIAEGTYLEQSQVKIMGASADSQNQGRTMVDINLVPLGEKFDNTTAVLTYRRFWDKKVHLNMTLFGDYEVVYISYPGISSSPSYGGYMGSGPSGSTGDLPITANFVNKSQKMNVKTIAIIALSAFVVLLVFIGALSIFLKWRKVGRPSSAVGPVFTSSINKRSGLGSGLSSSIASSTSISLISTMPTSLQSVKTFSLSELEKATDKFSSKRILGEGGFGRVYFGILEDGNEVAVKLLTTRDNQNRDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGIDKRKRPLDWDARLKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEVDFTPKVSDFGLAREATEGSEHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGKKPVDMSQPHGEENLVTWARPLLTSREGLEQLVDPSLAGSYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLMYNDTDETCADYCSQKESSARDSDFKGDLVPSDSSWWNAGGLTPRLTFGQASSFITMEYSSGPLEDMENRPFSTSSLVGDEISLPIRHGNRSGPLRTARSKPAFYRFSGSRSEHGGLLSRPSWNSGFWV 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 70014497 70020679 - Hsped.06g18810.1 Hepe06g1881 573256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1881 773 ProSiteProfiles Protein kinase domain profile. 369 645 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g1881 773 CDD STKc_IRAK 375 645 - -
Hepe06g1881 773 SUPERFAMILY Protein kinase-like (PK-like) 347 645 IPR011009 -
Hepe06g1881 773 MobiDBLite consensus disorder prediction 92 106 - -
Hepe06g1881 773 PANTHER OS01G0750732 PROTEIN 119 667 IPR050885 -
Hepe06g1881 773 Pfam Protein tyrosine and serine/threonine kinase 372 641 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe06g1881 773 Gene3D Phosphorylase Kinase; domain 1 342 445 - -
Hepe06g1881 773 FunFam Receptor-like serine/threonine-protein kinase ALE2 446 663 - -
Hepe06g1881 773 ProSitePatterns Protein kinases ATP-binding region signature. 375 397 IPR017441 GO:0005524(InterPro)
Hepe06g1881 773 Gene3D Transferase(Phosphotransferase) domain 1 446 668 - -
Hepe06g1881 773 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe06g1881 773 FunFam receptor-like serine/threonine-protein kinase ALE2 342 445 - -
Hepe06g1881 773 MobiDBLite consensus disorder prediction 75 113 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1463 Hepe-Chr3:71399828 Hepe06g1881 Hepe-Chr6:70014497 5.74e-194 dispersed
Hepe05g0509 Hepe-Chr5:6963510 Hepe06g1881 Hepe-Chr6:70014497 4.59e-80 dispersed
Hepe05g1260 Hepe-Chr5:59780518 Hepe06g1881 Hepe-Chr6:70014497 6.73e-82 dispersed
Hepe06g1881 Hepe-Chr6:70014497 Hepe07g1185 Hepe-Chr7:28179256 9.15e-97 dispersed
Hepe08g0711 Hepe-Chr8:6397764 Hepe06g1881 Hepe-Chr6:70014497 1.18e-35 dispersed
Hepe09g0473 Hepe-Chr9:4352832 Hepe06g1881 Hepe-Chr6:70014497 3.99e-75 dispersed
Hepe10g1553 Hepe-Chr10:52258371 Hepe06g1881 Hepe-Chr6:70014497 5.72e-74 dispersed
Hepe06g1881 Hepe-Chr6:70014497 Hepe09g0874 Hepe-Chr9:8680676 9.06e-210 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72893 PF07714 PK_Tyr_Ser-Thr 3.10E-47 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1881 - - - 0.0