Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1892 ATGAAGTTGAAAACCCAGATTTTGTTTTGTGTTTTTTTTTACTGTTGGATTGGTTTTTGCACGGAGTGTTCTTCTGCTTCTGGGTTTAGTGAAGAAGGATTGGCTTTGGTTTCGATTAAATCGGGGCTTGTTGATCCGTTGAAGTTGCTTAGAGATTGGAAGTTGGGCGATGGAAATGGTAAATTTGTTGGGCATTGTAATTGGACTGGAGTTTTTTGCAACTCGGATGGAGCTGTTGAGAAATTGAGCCTTTCTCGTATGAATCTCAGTGGCATTTTGTCGAACAGTTTGCAGACATTGACAAAGCTGAGTTCTATTGATTTGAGTTGCAATGAATTTTCGTCTTCTTTGCCAAAATCTATTGGAAATCTCACTTCCTTGAAGAGTTTTGATGTGAGTCAAAACTTTTTTGTTGGTGAAATTCCGATTGGGTTTGGGAAGATGGTGGGATTGATAAATTTCAATGCCTCGAGCAACAATTTCTCTGGTTTAATCCCTGAAGATCTTGGAAATGCAACTCTGCTGGAGATTTTGGATCTCCGGGGGAGTTTTCTTGAAGGGTCGATTCCTGTATCTTTCAAGAACTTGCAGAAGTTGAAGTTTCTTGGACTTTCGGGGAACAATCTGACCGGTCGAATCCCGACCGATATCGGTCAGATGTCGGCGTTAGAGACGGTTATTATTGGATACAATGAGTTTGAAGGAGGGATTCCATCAGAATTTGGAAATCTCACCAATCTGAAGTATCTTGATTTGGCTGTGGGGAATCTTGGTGGTGGGATTCCTGCTGAGCTTGGGAGGCTTAAGCAACTTGAGACATTGTTCCTTTATAAGAATGAATTCGAAGATCGAATTCCGGCATCGATTGGCAATGCTACTTCATTGGTGTTTCTTGATCTTTCCGACAACAAGTTGACGGGGGAAATTCCAGCTGAGGTTGCTGAATTGAAGAATTTGCAGCTGCTGAATCTAATGTGTAACAAGCTGTATGGTGAAGTACCTCCAGGGATTGGAGGGTTGAAAAAATTGCAGGTTCTAGAGCTCTGGAACAACTCTTTTTCTGGCCAATTGCCCGGGGATCTCGGCAAGAACTCGGAGTTGGTTTGGTTGGATGTCTCATCCAATTCTTTCTCGGGTCCAATTCCTGCTTCTGTATGCAATTGGGGCAATCTAACCAAGCTCATCCTTTTCAACAATGCCTTTTCGGGTCCGATTCCGATTGGATTATCGTCGTGTAACTCGCTAGTTCGTGTTCGAATGCAGAACAATCTGCTATCTGGTACAATCCCAGTTGGTTTTGGAAAGCTTGGGAAGCTTCTAAGGCTAGAATTAGCAAACAATAGTCTCATTGGTAGTATCCCAAGTGATATTTCATCTTCTAAATCCCTTTCTTTTATTGATTTCTCTGAAAACAACCTTCATTCTTCTCTTCCTTCCTCAATTCTTTCCATTCCAAATCTTCAAACTTTTATAGTCTCTGACAATAACATGGAAGGTGAAATTCCAGACCAGTTTCAGGATTGTCCTGCACTTTCGGTTCTCGATCTCTCTTCGAACCATTTCACAGGAAGCATTCCAGATAGCATTGCTTCATGTGAGAGATTGGTAAATCTGAATCTCAGAAACAACCAGTTAACTGGAGAAATCCCAAAACAGATTGCAAATATGCCTTCATTGTCTGTCCTCGATCTATCCAACAACTCTCTTACCGGTAGAATACCTGATAATTTCGGTATCTCTCCCGCACTGGAATCGCTTAATGTATCATTCAATAAGCTTGAGGGTCCAGTGCCATTCAATGGTGTGTTAAGAACAATCAATCCAAGTGATCTTCAGGGCAATGCTGGACTATGTGGAGCTGTCCTACTCCCATGTTCATCAAATTCAGCATTTACATCAGGACAAGGGAACTCGAACACGACACACATTATCGCCAGTTGGGTCATCGGAATATCTGCAGTTGTAGGAATATGCATTGCTCTTGTCGGTGTTCGATCATTGTACAAGAGGTGGTACTCGAGTGGAAGTTGCTTTGAAGGGAGATACGAAATGGGTGGTGGAAATTGGCCATGGAGATTGATGGCATTCCAAAGGCTTGGATTCACAAGCACTGACATTTTGGCTTGCATCAAGGAATCAAATGTAATTGGAATGGGAGCAACTGGGATTGTGTATAAAGCTGAAATGCCACAACAAAAGTCAGTTGTGGCAGTCAAAAAGCTGTGGAGATCAGAACCAGATCTTGAAAATGGAAGCAGTGAAAGTCTAGTAGGAGAAGTGAATTTACTGGGAAAGTTAAGGCACAGGAACATAGTTCGTTTACTCGGGTTTATGCATAACGACGTCGATGTAATGATCGTCTACGAGTTTATGCAAAATGGGAGCCTTGGAGAAACCTTACATGGCAAACAAGCAGGGAGGCTGCTTGTGGACTGGGTTTCAAGATACAACATAGCAATTGGAGTAGCACAAGGCATATCTTATCTCCACCATGATTGCAACCCACCCATCATTCATCGCGACGTTAAGCCAAATAATATACTTCTCGATTCAAATCTCGAAGCACGATTAGCTGATTTCGGGTTGGCACGGATGATGGCTCGAAAGAACGAGACGGTTTCAATGGTAGCTGGATCCTACGGCTACATTGCCCCCGAATATGGATACACTTTAAAGGTGGATGAAAAGATCGACATTTACAGCTACGGCGTCGTTCTTTTAGAGCTGCTGACAGGGAAGAAGCCATTAGATCCCGAGTTCGGAGAATCTGTGGACATTGTTGAATGGATTAGAAGGAAGGTTAGAGACAACAGATCTTTAGAAGAAGCATTAGATCCCAATCTGGGAAATTTCAAGCATGTTCAAGAAGAAATGCTTTTCGTCCTTCGAATAGCGCTTCTCTGCACTGCAAAGCATCCAAAAGACAGGCCTTCCATGAGAGATATAATAACAATGCTTGGAGAAGCAAAACCAAGGAGAAAAAGCAACAGTGGCAATGAAGGATTTGGAACTAACAAAGAAAAGCCAGTTTTCAACACTTCACCAGTAAATGGCCTTCTGTAG 3063 42.38 MKLKTQILFCVFFYCWIGFCTECSSASGFSEEGLALVSIKSGLVDPLKLLRDWKLGDGNGKFVGHCNWTGVFCNSDGAVEKLSLSRMNLSGILSNSLQTLTKLSSIDLSCNEFSSSLPKSIGNLTSLKSFDVSQNFFVGEIPIGFGKMVGLINFNASSNNFSGLIPEDLGNATLLEILDLRGSFLEGSIPVSFKNLQKLKFLGLSGNNLTGRIPTDIGQMSALETVIIGYNEFEGGIPSEFGNLTNLKYLDLAVGNLGGGIPAELGRLKQLETLFLYKNEFEDRIPASIGNATSLVFLDLSDNKLTGEIPAEVAELKNLQLLNLMCNKLYGEVPPGIGGLKKLQVLELWNNSFSGQLPGDLGKNSELVWLDVSSNSFSGPIPASVCNWGNLTKLILFNNAFSGPIPIGLSSCNSLVRVRMQNNLLSGTIPVGFGKLGKLLRLELANNSLIGSIPSDISSSKSLSFIDFSENNLHSSLPSSILSIPNLQTFIVSDNNMEGEIPDQFQDCPALSVLDLSSNHFTGSIPDSIASCERLVNLNLRNNQLTGEIPKQIANMPSLSVLDLSNNSLTGRIPDNFGISPALESLNVSFNKLEGPVPFNGVLRTINPSDLQGNAGLCGAVLLPCSSNSAFTSGQGNSNTTHIIASWVIGISAVVGICIALVGVRSLYKRWYSSGSCFEGRYEMGGGNWPWRLMAFQRLGFTSTDILACIKESNVIGMGATGIVYKAEMPQQKSVVAVKKLWRSEPDLENGSSESLVGEVNLLGKLRHRNIVRLLGFMHNDVDVMIVYEFMQNGSLGETLHGKQAGRLLVDWVSRYNIAIGVAQGISYLHHDCNPPIIHRDVKPNNILLDSNLEARLADFGLARMMARKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKKPLDPEFGESVDIVEWIRRKVRDNRSLEEALDPNLGNFKHVQEEMLFVLRIALLCTAKHPKDRPSMRDIITMLGEAKPRRKSNSGNEGFGTNKEKPVFNTSPVNGLL 1020
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 70119714 70123232 + Hsped.06g18920.1 Hepe06g1892 573267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1892 1020 Gene3D Transferase(Phosphotransferase) domain 1 795 1007 - -
Hepe06g1892 1020 Pfam Protein kinase domain 712 983 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g1892 1020 FunFam Leucine-rich repeat receptor protein kinase EMS1 285 367 - -
Hepe06g1892 1020 ProSiteProfiles Protein kinase domain profile. 710 993 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g1892 1020 SMART serkin_6 710 986 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g1892 1020 Pfam Leucine rich repeat 485 545 IPR001611 GO:0005515(InterPro)
Hepe06g1892 1020 Pfam Leucine Rich Repeat 294 314 IPR001611 GO:0005515(InterPro)
Hepe06g1892 1020 Pfam Leucine Rich Repeat 367 388 IPR001611 GO:0005515(InterPro)
Hepe06g1892 1020 Pfam Leucine Rich Repeat 102 124 IPR001611 GO:0005515(InterPro)
Hepe06g1892 1020 Pfam Leucine Rich Repeat 198 220 IPR001611 GO:0005515(InterPro)
Hepe06g1892 1020 Pfam Leucine Rich Repeat 342 363 IPR001611 GO:0005515(InterPro)
Hepe06g1892 1020 Pfam Leucine Rich Repeat 558 578 IPR001611 GO:0005515(InterPro)
Hepe06g1892 1020 MobiDBLite consensus disorder prediction 997 1020 - -
Hepe06g1892 1020 SMART LRR_typ_2 556 580 IPR003591 -
Hepe06g1892 1020 SMART LRR_typ_2 508 532 IPR003591 -
Hepe06g1892 1020 SMART LRR_typ_2 340 364 IPR003591 -
Hepe06g1892 1020 SMART LRR_typ_2 268 292 IPR003591 -
Hepe06g1892 1020 SMART LRR_typ_2 436 460 IPR003591 -
Hepe06g1892 1020 SMART LRR_typ_2 196 220 IPR003591 -
Hepe06g1892 1020 SMART LRR_typ_2 316 339 IPR003591 -
Hepe06g1892 1020 SMART LRR_typ_2 100 124 IPR003591 -
Hepe06g1892 1020 FunFam MDIS1-interacting receptor like kinase 1 795 1004 - -
Hepe06g1892 1020 FunFam MDIS1-interacting receptor like kinase 1 710 794 - -
Hepe06g1892 1020 Gene3D Ribonuclease Inhibitor 288 366 IPR032675 -
Hepe06g1892 1020 Gene3D Ribonuclease Inhibitor 367 629 IPR032675 -
Hepe06g1892 1020 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 184 284 - -
Hepe06g1892 1020 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 19 989 IPR050647 -
Hepe06g1892 1020 ProSitePatterns Protein kinases ATP-binding region signature. 716 740 IPR017441 GO:0005524(InterPro)
Hepe06g1892 1020 SUPERFAMILY RNI-like 261 598 - -
Hepe06g1892 1020 MobiDBLite consensus disorder prediction 987 1020 - -
Hepe06g1892 1020 Gene3D Phosphorylase Kinase; domain 1 710 794 - -
Hepe06g1892 1020 SUPERFAMILY Protein kinase-like (PK-like) 708 986 IPR011009 -
Hepe06g1892 1020 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Hepe06g1892 1020 SUPERFAMILY L domain-like 64 354 - -
Hepe06g1892 1020 Gene3D Ribonuclease Inhibitor 183 287 IPR032675 -
Hepe06g1892 1020 Gene3D Ribonuclease Inhibitor 28 182 IPR032675 -
Hepe06g1892 1020 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 29 183 - -
Hepe06g1892 1020 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 368 629 - -
Hepe06g1892 1020 PRINTS Leucine-rich repeat signature 556 569 - -
Hepe06g1892 1020 PRINTS Leucine-rich repeat signature 295 308 - -
Hepe06g1892 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 837 849 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1594 Hepe-Chr2:21182977 Hepe06g1892 Hepe-Chr6:70119714 5.79e-59 dispersed
Hepe05g1064 Hepe-Chr5:51624330 Hepe06g1892 Hepe-Chr6:70119714 4.76e-40 dispersed
Hepe06g1892 Hepe-Chr6:70119714 Hepe07g0583 Hepe-Chr7:6307627 6.72e-87 dispersed
Hepe08g2480 Hepe-Chr8:65896022 Hepe06g1892 Hepe-Chr6:70119714 8.56e-42 dispersed
Hepe06g1892 Hepe-Chr6:70119714 Hepe07g0268 Hepe-Chr7:2694704 1.40e-107 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72894 PF00069 Pkinase 2.00E-48 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1892 - - - 0.0