Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1916 ATGTATCTTCAGTTTTACATAAACGACAATGGTGACAAGGTCTACACCACGAAGAAAGAATCGCCTCTTGGTTTGGTCACAGAATCCGCTCATCCAGCTCGTTTCTCTCCTGATGACAAATACTCGAGGCAGAGAGTTCTTCTTAAGAAGCGATTTGGCTTGCTACCCACGCAGAAGCCAGCTCCAAACTATTGCCCAAAAAACCATCCCAAAGCATTCAACAAACTGAGAAACGAAATAAATTCCGTCGTCGGAACCACCCGGCTCGTCGGAGAAGACGACGTCCCAAATCTCCCTTACTTACAAGCCGTCGTCAAAGAAGCTCTCCGCCTCTACCCCGCCGTCCCTCTGGCCATGCGAGCCTGCCGTGAAGATTGCAAAATCGACGGCTTCGACGTCCCGAAAGACACAATGGTTGCAGTCAACCTATTCGCCATAATGCGCGACCCAAATGTTTGGCAAAATCCCAAGGAATTCGACCCCGAAAGGTTCACCGGCGAGGTGAGGTACGAGATTAAGGGTCAGCAAAGTTTCAAGTTCGTTCCCTTTGGTGGGGGAAGAAGGGCTTGCCCTGGCTCGACTTTGGCTTTCAGTTTCATCAGCAATGTGATTGCAGCCATGGTTCAGTGCTTTGATTGGAAGATTGGGAAAAATGGAGATCAAATTAAAGTGAATATGGAGATTGGAGCTGCCTTCACTTTGCCCATGGCCAACCCACTTGTCTGTGTTCCTGTTGTTCGCTTCAACCCTTGA 753 49.0 MYLQFYINDNGDKVYTTKKESPLGLVTESAHPARFSPDDKYSRQRVLLKKRFGLLPTQKPAPNYCPKNHPKAFNKLRNEINSVVGTTRLVGEDDVPNLPYLQAVVKEALRLYPAVPLAMRACREDCKIDGFDVPKDTMVAVNLFAIMRDPNVWQNPKEFDPERFTGEVRYEIKGQQSFKFVPFGGGRRACPGSTLAFSFISNVIAAMVQCFDWKIGKNGDQIKVNMEIGAAFTLPMANPLVCVPVVRFNP 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 70298329 70302975 + Hsped.06g19160.1 Hepe06g1916 573291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1916 250 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 68 247 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Hepe06g1916 250 PRINTS P450 superfamily signature 103 114 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe06g1916 250 PRINTS P450 superfamily signature 181 190 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe06g1916 250 PRINTS P450 superfamily signature 68 81 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe06g1916 250 PRINTS P450 superfamily signature 190 201 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe06g1916 250 Gene3D Cytochrome P450 64 234 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe06g1916 250 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 183 192 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Hepe06g1916 250 PRINTS E-class P450 group I signature 102 120 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe06g1916 250 PRINTS E-class P450 group I signature 59 85 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe06g1916 250 PRINTS E-class P450 group I signature 142 166 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe06g1916 250 PRINTS E-class P450 group I signature 180 190 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe06g1916 250 PRINTS E-class P450 group I signature 190 213 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe06g1916 250 Gene3D H/ACA ribonucleoprotein complex, subunit Nop10 10 54 - -
Hepe06g1916 250 Pfam Cytochrome P450 68 238 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe06g1916 250 SUPERFAMILY Nop10-like SnoRNP 3 58 IPR036756 GO:0001522(InterPro)|GO:0030515(InterPro)|GO:0042254(InterPro)
Hepe06g1916 250 Pfam Nucleolar RNA-binding protein, Nop10p family 3 52 IPR007264 GO:0001522(InterPro)|GO:0030515(InterPro)|GO:0042254(InterPro)
Hepe06g1916 250 FunFam H/ACA ribonucleoprotein complex subunit 3 10 54 - -
Hepe06g1916 250 SUPERFAMILY Cytochrome P450 68 247 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1916 Hepe-Chr6:70298329 Hepe04g0354 Hepe-Chr4:51306476 1.82e-54 dispersed
Hepe06g1916 Hepe-Chr6:70298329 Hepe06g1918 Hepe-Chr6:70318646 2.47e-40 proximal
Hepe03g1193 Hepe-Chr3:65996350 Hepe06g1916 Hepe-Chr6:70298329 2.26e-41 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1916 K23814 - csv:101210388 321.627