Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1977 ATGGCTATCCAGAAGATCGAAGTAACCGAATTCTTTATGCTTCTTCTATGGTTTATGATGTACACGATAACGTACTGCTTTGCGGAATCGTCGACGTGCTTGATGGTATACAAGGAAGGTGGCGCTCCGGCGGTATTTCAATCCCCGAAATGTCCTCTCTGGAAGCTCTCCGACTACACTTTTCAATCTCCCAGCGCCTCTCATTGTCAGATTGCAATGCATCAGGGTCGAAGAAAGTATCAGGAGGATCGCACTCTTTGTACTCTCGACGTTCGAATTCCCTTCCCAAGTAAAACAGGTCTTACGGAGGTACCTGTGGGAATCATAGCAGTTTTTGATGGTCATAATGGTGCTGAAGCTAGTGAGATGGCTTCAAAGATTTTGTTGGAGTATTTTGTCGTGCATACTTATTTTCTTCTTGATGCCACTTATTCTGGAATTTTCAAGAGACCCATTAAGACATTTTCAAATGAGAGGGAACGTCGTACCGTATTTAATCAGCTTAGTTGGAATGACAAAATTAGAAACCGTGATCTGGATCTTGGAAGGCTTAAATACTTACTTCCAGCAGATTTTAATGATGATTTCCATTTGGAAATTTTGAAAGAAGCACTGTTGAGAGCTATACGAGATCTTGATATAACATTTTCCAAGGAAGCACATAAAAATAATCTTGCTTCGGGTTCTACTGCTACTGTTATATTATTAGCAGATGCACAAATTTTGGTTGCAAACATTGGTGACTCAAAGGCTTTCTTGTGCTCTGAAAAATTCCAGTCACCTGCAGAGGCTAAAGCCACCTTTTTAAGGTTATACAAGCAAAAAAGATATAGCGGTGCCTCACGTGCAAGGGGCTATGGAAATTCTAGACCAGACTCGTATGATGGGCTGACACATTTTTATGTCAAAGAATTGACTAGAGATCATCATCCAGATAGAGAGGATGAAAGATCTAGGGTGGAGATTGCTGGGGGTCATGTTGTTGAATGGGGTGGTGTACCTCGCGTAAATGGTCAGTTGGCTATAAGCAGAGCAATTGGTGATGTGTCTTTTAAAAGCTATGGGGTTATATCTGCACCAGAAGTGACTGACTGGCAACCTTTGTCTACCAACGATAGCTATTTGGTGGTTTCATCTGATGGAATTTTTGAGAAACTGAGCTCACAAGATGTTTGTGACTTGTTGTGGGAAATACACAATGATGGTATGTCAAATTCAGAACATTCTCCTTCATGCTCATACTCATTGGCGGATTGCATTGTTAGCACTGCCTTCGAAAGGGGCAGTATGGATAACATGGCTGCTATCGTGGTTCCTTTAAGACCTGCTAGTTCTTCTCGGAGATTTCAGGATGGGGCCTTTGTTGCACAGAGAGACTCAACCTTTTCCATATCTGGAATAGAAAAGCTTATTAAAGAGCACCTAGCCAAGGGCGTCTCTTCCAATGCCGTGCAGCATTCTCATCCAGTTATGTCCAAGTTCAAGAGATTATTAGTTGAAGGAAGACACAATTATCTGGGATGTTTTTATCTGTCTGAGAATCTGGATGAATACAACAAGGATGACGTGTCGAGAACTCAAAATGAAGAAGAAGAATATTTATGTGATCTACCCCACGCTCTTCCAGAATCTGATGGTGGATCTTTAAATGTGTACACTGACCAAAGCTTGTGCTTTCATCTTGGAAGGGTTGGTGCTAAAGATCAGTGCTTTAATCCTGAAGGCTTTGCTAGTTTTATTGGTTTGCTTGAATCAATTCCTTTTCACGATCCTAGTCCAGATTATCAATTATTTGAGCATTCACCACCTGTCTTGAGGTATGTGTTAAAGAAAAGGTTTGGTCGTGGTTCCTATGGTGAAGTATGGCTGGCTTTTCATGGGAACTGCCAGGAAGCCTTTAGTGCAGAAGAAGAGAATATTAATGTTTCGTGCAACTCATCTTTTGGAGACACCAATGTCAGAAACTGTAGCTACTCTTCAAATAGTTCTCAAGCATATTCTCTGGAGGATAACTTGTTCATCATGAAACGTGTAATGGTTGAAAGAGGTGCTGGAGTCTATTTGAGTGGCTTACGGGAGAAATATTTTGGTGAAATATTTTTGAATGCTTCTACACGCCTTGGAGATGTGTTATCGACTGGAACATCAAACTTTGTCTTTGAAGAGTCACCGTGGGGATCTAAAAACTTATTGGCAAAGGATGAATCGCTGAGTTATAAAGTAGGGGAAACTAGGCATTTTAAAAATACTTTTCCGAATCAGTTTAGACCAAAGAGAGTTATCTATGAAGAAGGTTTAAACCATATTGTGAGATATGTTGAATCTTTTGAATCTCGGTCTAATGAAATATGGCTTGTATTTCATTACGAAGGCATGTCCCTCTCAAAGCTTATATATTCTATTGACGATGCTGATGAAGAAAAAGTTGAGCAAAAAAACCACGTTCAAATTTTACGACCTTCCAAGTGGTGGCATTGGTTGAAAACAACAGAAGCAGGACAAGAGGAGATGAAAAATTTGATACGTCAGTTGTTGATGGCACTCAAGTCTTGTCATGACCGCAATATCACTCACAGGGATATTAAACCTGAGAACATGGTGATATGCTTTGAAGATCAGGCTACTGGAAAATGCTTGAATGGAAGTCGAAGGGGAGATGAGAACTTCTCTACTAAAATGCGCATTATTGACTTTGGTAGTGCTATTGATGAATTCACAGTTAAGCATCTATATGGGTCTACTGGGCCTTCCAGAGCGGAACAGACTTATGATTACACACCTCCTGAAGCCTTGCTTAATTCAAGTTGGTATCGGGAGATGTCAAGTGCTACTTTGAAGTATGATATGTGGAGCGTTGGTGTAGTGATGTTAGAATTGATCATAGGATCACCCAATGTTTTTCAGGTAAGTGACTTAACCCGTGTTCTTTTGGACCGGCATCTTGAAGGATGGAATGAAGGTGTAAAGCAGCTAGCATACAAGCTTAGGTCGTTCATGGAGTTGTGCATTTTAATTCCTGGGAGTTCCTCAAAAAGTTATCAAAAAAATGTTCATCAAGGAGGTTCACCAGCATCCTGGAAATGCTCTGAAGAAGTTTTTGCCCACCAAATAAAGAGTAGAGATCCTCTTAAACTAGGGTTTCCAAATGTTTGGGCTCTACGGTTGGTCCGCAATCTACTACAATGGAATCCAGAGAACCGTTTGAATGTCGATGATGCTTTGCGACATCCTTATTTCCACCCTTCTCCTAAAGGAGGATGA 3261 40.75 MAIQKIEVTEFFMLLLWFMMYTITYCFAESSTCLMVYKEGGAPAVFQSPKCPLWKLSDYTFQSPSASHCQIAMHQGRRKYQEDRTLCTLDVRIPFPSKTGLTEVPVGIIAVFDGHNGAEASEMASKILLEYFVVHTYFLLDATYSGIFKRPIKTFSNERERRTVFNQLSWNDKIRNRDLDLGRLKYLLPADFNDDFHLEILKEALLRAIRDLDITFSKEAHKNNLASGSTATVILLADAQILVANIGDSKAFLCSEKFQSPAEAKATFLRLYKQKRYSGASRARGYGNSRPDSYDGLTHFYVKELTRDHHPDREDERSRVEIAGGHVVEWGGVPRVNGQLAISRAIGDVSFKSYGVISAPEVTDWQPLSTNDSYLVVSSDGIFEKLSSQDVCDLLWEIHNDGMSNSEHSPSCSYSLADCIVSTAFERGSMDNMAAIVVPLRPASSSRRFQDGAFVAQRDSTFSISGIEKLIKEHLAKGVSSNAVQHSHPVMSKFKRLLVEGRHNYLGCFYLSENLDEYNKDDVSRTQNEEEEYLCDLPHALPESDGGSLNVYTDQSLCFHLGRVGAKDQCFNPEGFASFIGLLESIPFHDPSPDYQLFEHSPPVLRYVLKKRFGRGSYGEVWLAFHGNCQEAFSAEEENINVSCNSSFGDTNVRNCSYSSNSSQAYSLEDNLFIMKRVMVERGAGVYLSGLREKYFGEIFLNASTRLGDVLSTGTSNFVFEESPWGSKNLLAKDESLSYKVGETRHFKNTFPNQFRPKRVIYEEGLNHIVRYVESFESRSNEIWLVFHYEGMSLSKLIYSIDDADEEKVEQKNHVQILRPSKWWHWLKTTEAGQEEMKNLIRQLLMALKSCHDRNITHRDIKPENMVICFEDQATGKCLNGSRRGDENFSTKMRIIDFGSAIDEFTVKHLYGSTGPSRAEQTYDYTPPEALLNSSWYREMSSATLKYDMWSVGVVMLELIIGSPNVFQVSDLTRVLLDRHLEGWNEGVKQLAYKLRSFMELCILIPGSSSKSYQKNVHQGGSPASWKCSEEVFAHQIKSRDPLKLGFPNVWALRLVRNLLQWNPENRLNVDDALRHPYFHPSPKGG 1086
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 70991704 71017036 + Hsped.06g19770.1 Hepe06g1977 573352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1977 1086 ProSitePatterns Serine/Threonine protein kinases active-site signature. 856 868 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe06g1977 1086 SUPERFAMILY Protein kinase-like (PK-like) 765 1081 IPR011009 -
Hepe06g1977 1086 PANTHER PROTEIN PHOSPHATASE 68 439 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe06g1977 1086 ProSiteProfiles PPM-type phosphatase domain profile. 65 440 IPR001932 -
Hepe06g1977 1086 Pfam Protein phosphatase 2C 303 433 IPR001932 -
Hepe06g1977 1086 Pfam Protein phosphatase 2C 201 256 IPR001932 -
Hepe06g1977 1086 Pfam Protein kinase domain 767 1079 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g1977 1086 ProSiteProfiles Protein kinase domain profile. 607 1079 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g1977 1086 CDD PP2Cc 75 440 IPR001932 -
Hepe06g1977 1086 SUPERFAMILY PP2C-like 65 441 IPR036457 -
Hepe06g1977 1086 Gene3D Transferase(Phosphotransferase) domain 1 811 1080 - -
Hepe06g1977 1086 SMART PP2C_4 62 438 IPR001932 -
Hepe06g1977 1086 SMART serkin_6 607 1079 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g1977 1086 Gene3D - 61 447 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1977 Hepe-Chr6:70991704 Hepe10g0050 Hepe-Chr10:463067 6.66e-11 dispersed
Hepe06g1977 Hepe-Chr6:70991704 Hepe03g1010 Hepe-Chr3:55012115 2.35e-11 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72896 PF00069 Pkinase 2.70E-26 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1977 - - - 0.0