Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g2010 ATGAACATTCTATTCAACTTCAACAGATCTCTCAGTGAGCACCGAGACATTTGCCGCCTAACAGCACCTGTTCACCAAGGAACAAGTCCATTGCCAACCGATTTATCAGATTGTTGTGATGAAGACCGTTCTGATCGAGGCCTTGGAGCAATAGCTATGGATTGTGTAATGGCTGGTGGTGGAAGTGATGGCACACTGGACCTTTGTGTTGGGATCTGCCTTGTTGATGCAGATGAGAAATTGATTTTCAATACTTTCGTACAACCACAAACACCGATCACGAATTACCGGCATGAAGTAACTGGGCTAACGGAAGAACATATGAGGTATGCCATGCCACTGAAAGAAGTCCAAAAAAAAGTATTAAGAATCTTGTTAAATGGAGAATCCATTGGGAGATTGAGATTGAATGGTGGTAAAGCTAGGCTTCTTGTTGGCCATGACTTGGAGCATGATTTAGATTGCTTGAGAATGTTAAGGGACACTGCTAGATATCATCCATTGATGAAAACAAATTTGGTTAGCCATTCTCTCAAGTACCTTACTCGAACATATTTGGGGTATGATATTCGGCAAGGTGTGCACGATCCCTACGAAAATTGTGTATCGGTGATGCGATTGTACAAGAGAATGCGTAGTCTTGATGATCATGGACAAGTTATGACGCCGTCTTTTACTCCTCCTCAGACTTGGGAACCTATCATTTTCATTTTGTGCAGGGAAGAAAAGAGCAGAAAAGGGCATTGA 747 42.3 MNILFNFNRSLSEHRDICRLTAPVHQGTSPLPTDLSDCCDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVGICLVDADEKLIFNTFVQPQTPITNYRHEVTGLTEEHMRYAMPLKEVQKKVLRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMLRDTARYHPLMKTNLVSHSLKYLTRTYLGYDIRQGVHDPYENCVSVMRLYKRMRSLDDHGQVMTPSFTPPQTWEPIIFILCREEKSRKGH 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 71252127 71254953 - Hsped.06g20100.1 Hepe06g2010 573385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g2010 248 CDD REX4_like 51 209 IPR037431 GO:0006364(InterPro)|GO:0008408(InterPro)
Hepe06g2010 248 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 38 215 IPR047021 GO:0004527(PANTHER)|GO:0004527(InterPro)|GO:0005634(PANTHER)
Hepe06g2010 248 SMART exoiiiendus 49 217 IPR013520 -
Hepe06g2010 248 SUPERFAMILY Ribonuclease H-like 51 212 IPR012337 -
Hepe06g2010 248 Gene3D - 49 224 IPR036397 GO:0003676(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0450 Hepe-Chr2:4343439 Hepe06g2010 Hepe-Chr6:71252127 2.17e-154 dispersed
Hepe02g3108 Hepe-Chr2:80245079 Hepe06g2010 Hepe-Chr6:71252127 3.38e-54 dispersed
Hepe06g2010 Hepe-Chr6:71252127 Hepe06g2012 Hepe-Chr6:71277876 5.27e-98 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g2010 K18327 - csv:101206525 387.111