Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0039 ATGGCTGCTTTCGCCTCACTGCCCCTAACTTCATCTTCATCTTCGTCTTCTTTACATCATGTTGTCCAATTCTCCTCAAAAGTTCTTTATGATCCAAGTTCCTATCACCTCACAGTCAGATCAATCAGACATGGAAAGCAAAAATTTACCTCTCAGGCCAACCCAAGGAGCCTAGTAATCCTTGGTGCAGCAACAAAACAAGCAAAAACACCAGCTGAAGAGGATTGGAAGGTGAAGAGGGAACTTCTGCTGCAGAAAAGGGTAAGGAGTATGGATGCTAATGAAGCTCTGCGTCTTCAGAAGGAAAATAACTTTGTGATTCTTGACGTAAGGCCAGAAGCAGAATTCAAAGAGGCACATCCACCAGGTGCCATTAATGTGCAAATCTACAGGCTTATAAAGGAGTGGACAGCATGGGACATAGCCAGGAGAGCTGCATTTGCATTTTTTGGCATCTTTTCGGGTACAGAAGAAAACCCAGAGTTCTTGCAAAGTGTAGAATCTAAAATAGATAAAGATGCCAAAATAATAGTAGCATGCTCATCAGGTGGAACAATGAAACCTACCCAGAATCTTCCGGAAGGTCAACAATCAAGGTCATTGATAGCAGCCTACTTGTTAGTTCTCAACGGCTACACCAACGTATTTCACTTAGAAGGTGGTCTCTACAATTGGTTCAAAGAAGGATTGCCTGTAGTTTCAGAAGAGTGA 711 42.62 MAAFASLPLTSSSSSSSLHHVVQFSSKVLYDPSSYHLTVRSIRHGKQKFTSQANPRSLVILGAATKQAKTPAEEDWKVKRELLLQKRVRSMDANEALRLQKENNFVILDVRPEAEFKEAHPPGAINVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKIDKDAKIIVACSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGYTNVFHLEGGLYNWFKEGLPVVSEE 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 448452 451334 - Hsped.07g00390.1 Hepe07g0039 573434

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0039 236 SMART rhod_4 91 231 IPR001763 -
Hepe07g0039 236 Gene3D - 75 232 IPR036873 -
Hepe07g0039 236 FunFam Rhodanese-like domain-containing protein 14, chloroplastic 75 233 - -
Hepe07g0039 236 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 86 233 IPR036873 -
Hepe07g0039 236 Pfam Rhodanese-like domain 93 227 IPR001763 -
Hepe07g0039 236 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 14 235 IPR043186 GO:0009507(PANTHER)
Hepe07g0039 236 ProSiteProfiles Rhodanese domain profile. 101 234 IPR001763 -
Hepe07g0039 236 CDD RHOD 95 225 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0039 - - - - 0.0
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g997 . Blo15g00078 . . . Bpe07g01026 . . Cmo16g00036 . . . . . Sed07g0876 . Cpe14g00024 Bhi01g01519 Tan01g0061 Cmetu06g0246 . Hepe07g0039 Mch10g0037 . . . . . . . . . . . Cone15ag0001 . . . Cme06g01169 . . Bda06g00795 . . . . Bma12g01221 . . . Cma16g00031 . Car16g00029 . . . . . . . . . . Cla05g00987 Cam05g1078 Cec05g1086 Cco05g1080 Clacu05g1072 Cmu05g1022 Cre05g1096 . Csa03g01965 . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hepe07g0486 . 59 376 Sulfurtransferasese/Rhodanese AT1G79230 74.5 3.3e-145 511.5
Hepe07g0486 . 59 323 Sulfurtransferasese/Rhodanese AT1G16460 73.6 7.9e-113 403.7
Hepe07g2429 . 38 314 Sulfurtransferasese/Rhodanese AT5G23060 60.5 2.3e-87 319.3
Hepe05g2013 . 1 450 Sulfurtransferasese/Rhodanese AT4G01050 51.1 1.7e-116 416.8
Hepe09g1739 . 6 609 Sulfurtransferasese/Rhodanese AT1G09280 63.9 1.1e-226 783.1
Hepe01g0631 . 61 451 Sulfurtransferasese/Rhodanese AT2G40760 69.9 1.2e-156 550.1
Hepe02g2054 . 83 427 Sulfurtransferasese/Rhodanese AT1G17850 67.8 4.4e-148 521.5
Hepe04g0246 . 31 236 Sulfurtransferasese/Rhodanese AT2G42220 74.8 2.8e-85 312.0
Hepe05g0089 . 6 217 Sulfurtransferasese/Rhodanese AT3G08920 57.4 4.5e-66 248.1
Hepe09g0093 . 1 295 Sulfurtransferasese/Rhodanese AT4G24750 67.8 2.5e-112 402.1
Hepe08g0162 . 43 293 Sulfurtransferasese/Rhodanese AT5G19370 58.3 9.6e-83 303.9
Hepe05g1317 . 110 456 Sulfurtransferasese/Rhodanese AT5G55130 73.3 1.6e-148 522.7
Hepe07g0039 . 56 236 Sulfurtransferasese/Rhodanese AT4G27700 79.0 1.8e-78 289.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011827 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30