Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0048 ATGGCTTTGCTGAGTCCTCGATTGCATAGATTCCGCTTAACCAAGCTCCACCATGCCTCTGCCTTCAAACCCACTAAAACAAATCAGCTCACTCTCAGAACAAAAACCAGTTGCTGCTCTGCCATAGCTATTGATGCTCCATCTTCTTTAACAGATGCTGCTGGAATCAGATGGGGTTCGACTTCTCTGCAAGGCTTGCGGGAAGAAATGGAGGACGATGCTGTTCTGCGCTCTGATAGTCTTAATGGCTTCTTCTTTGCTGCAGTGTTCGATGGCCATGGTGGCTATTCCTCCGCCAAGTTCCTCAGGGAGGAGCTGTACAAAGACTGCGTAGCAGCTTTACAAGGTGGCGTGCTGTTGAATGGAGGGGATTTTGAAGCGATTAAAGCTGCTTTGCAGAAAGCTTTTGATGATACTGATAAAAGATTACTCCTTTTGCTTGAGGCAGCTGAGGAGGAAGATGAATCTGGTTCCACTGCAACTGTTGCATTCATACGAAACGATGTGCTCTTCATTTCTCATGTTGGTGACTCTTGTGTTGTATTATCTCGTTCGGGAGGAGCACAGGTGTTGACGAGTTCTCATCGGCCTTATGGAAACAACAGCATCTCACTGCAAGAAATTAGAAGAATTAGAGAAGCAGGTGGATGGATCGTTAACGGGAGAATCTGTGGAGACATCTCTGTATCTCGTGCATTTGGTGATATACGATTCAAGACGAAGAAAAACGAGATGCTACAGAAAGGAGTTGAAGAAGGGAGATGGTCTGAAAAATTTGTTTCTCGTATACAGTTCAATGGAGATTTGGTTACTGCATCACCAGAAATTTCTCAAGTTACTCTCGGATCGAATGTCGAGTTTATACTGATAGCTTCTGATGGCCTATGGGATTACATGAATAGCTCCGACACGGTTAAGTTTGTCCGGAATCAACTTAGACAGCACGGTGATGTTCAGCTAGCATGTGAAGCCCTTGCACAAGCAGCCTTGGATAAAGGGTCACAAGACAATATCAGCATTATCATGGCTGATTTGGGGCGGACAGATTGGCAGAATTTGCCCCTTAAGCAAGACAATGTCATATTTGAACTGGCTCAAGCTTTTGCGACGATCGGGGTCGTTTCTTCTGGTATTTGGTGGGTGTCCTCTATTTTCTCTCTTTAA 1164 45.02 MALLSPRLHRFRLTKLHHASAFKPTKTNQLTLRTKTSCCSAIAIDAPSSLTDAAGIRWGSTSLQGLREEMEDDAVLRSDSLNGFFFAAVFDGHGGYSSAKFLREELYKDCVAALQGGVLLNGGDFEAIKAALQKAFDDTDKRLLLLLEAAEEEDESGSTATVAFIRNDVLFISHVGDSCVVLSRSGGAQVLTSSHRPYGNNSISLQEIRRIREAGGWIVNGRICGDISVSRAFGDIRFKTKKNEMLQKGVEEGRWSEKFVSRIQFNGDLVTASPEISQVTLGSNVEFILIASDGLWDYMNSSDTVKFVRNQLRQHGDVQLACEALAQAALDKGSQDNISIIMADLGRTDWQNLPLKQDNVIFELAQAFATIGVVSSGIWWVSSIFSL 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 497620 501631 - Hsped.07g00480.1 Hepe07g0048 573443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0048 387 Pfam Protein phosphatase 2C 59 338 IPR001932 -
Hepe07g0048 387 CDD PP2Cc 56 345 IPR001932 -
Hepe07g0048 387 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169(InterPro)
Hepe07g0048 387 PANTHER PROTEIN PHOSPHATASE 2C 55 344 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Hepe07g0048 387 SMART PP2C_4 47 343 IPR001932 -
Hepe07g0048 387 ProSiteProfiles PPM-type phosphatase domain profile. 57 345 IPR001932 -
Hepe07g0048 387 Gene3D - 56 351 IPR036457 -
Hepe07g0048 387 SUPERFAMILY PP2C-like 54 346 IPR036457 -
Hepe07g0048 387 FunFam Protein phosphatase 2C 57 56 352 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0048 Hepe-Chr7:497620 Hepe10g1335 Hepe-Chr10:49448469 1.36e-23 dispersed
Hepe07g0048 Hepe-Chr7:497620 Hepe08g1407 Hepe-Chr8:16615057 4.97e-20 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0048 K04457 - csv:101218076 673.7