Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0077 ATGCATCATTCACTGAACAAACTGCAGCAGCTCCCCCGACGGCCGGTCGCCGGAATGTGTGATCTCACTACTATGATTAAAACGAAGAATGCTCGCCGGAGACGGATGAGAGTTCGTAAACTGAGGTACAACTGGCAGAGGAAGGTACAAGCGGAGGGAGAATTGGGCGAAAATGGAGTTTCGGAATCGAATAATGGCGATCCAGTACTGATCTCTCAGAAGGAATCAATTTCGATGTTTGATTCTGGATTTTACAGCGAGATGTCGATTATAGGGCGGAGGAAGGAGATGGAAGATGAAGTGAGAGTGGAATTAGGATTGACGACGGCGATTCATGATGAAAAGTGCGATTTCTTCGCTGTGTACGACGGACACGGCGGTGCGCAGGTGGCGAAGGTGTGCCGTGAGCGGTTGCACCGGATTGTGGCGGAGGAGATTGTGGATCGGGGAGAGATGGATGAGGCGGAGTGGGGGAGGTTGATGGAGAGGTGCTTTGAGAGAATGGACGATGAAGTGAACAGAGGCGCCGCCGTGATGAAGACGGTCGGCTCGGCGGTGGTCGCGGCGGTGATCGGAAAGGAGAAGGTGGTGGTGGCTAATTGCGGCGATTGTCGAGCAGTTTTGGCTAGGGATGGATTTGCCTTGCCCTTGTCTAACGATCATAAGCCTGGCAGAGCTGATGAATTGAAGAGAATTGAATCTGCCGGTGGGAGGGTCATCAACTGGAATGGCAACCGGGTGCTAGGAGTTCTCGCCACTTCGAGATCGATCGGTGATGAATATCTTAAACCATTTGTTATCTCCAAACCAGAAGTAACTGTGACCAAGCGAACCAACAACGACGAGTTTCTCATACTAGGAAGCGATGGACTGTGGGACGTCGTTTCGAACGAAGTTGCCTGCAACGTAGTGAGGAGATGTTTTGGAGGAAAAATGAAGAGGATTTCGTTAAAGGTGGACAACGACAGCCATGTTGCCGAAGCTGCAGCCGTGTTGGCGGAGCTCGCAGTGGCTCGTGGAAGTAAGGACAACATCAGTGTAATAGTAGTAGATTTGAGGAAACCAAACAGTTCCTCTCCATGA 1083 51.06 MHHSLNKLQQLPRRPVAGMCDLTTMIKTKNARRRRMRVRKLRYNWQRKVQAEGELGENGVSESNNGDPVLISQKESISMFDSGFYSEMSIIGRRKEMEDEVRVELGLTTAIHDEKCDFFAVYDGHGGAQVAKVCRERLHRIVAEEIVDRGEMDEAEWGRLMERCFERMDDEVNRGAAVMKTVGSAVVAAVIGKEKVVVANCGDCRAVLARDGFALPLSNDHKPGRADELKRIESAGGRVINWNGNRVLGVLATSRSIGDEYLKPFVISKPEVTVTKRTNNDEFLILGSDGLWDVVSNEVACNVVRRCFGGKMKRISLKVDNDSHVAEAAAVLAELAVARGSKDNISVIVVDLRKPNSSSP 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 740930 743762 + Hsped.07g00770.1 Hepe07g0077 573472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0077 360 CDD PP2Cc 84 352 IPR001932 -
Hepe07g0077 360 PANTHER PROTEIN PHOSPHATASE 54 351 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe07g0077 360 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169(InterPro)
Hepe07g0077 360 Pfam Protein phosphatase 2C 87 345 IPR001932 -
Hepe07g0077 360 SUPERFAMILY PP2C-like 76 354 IPR036457 -
Hepe07g0077 360 Gene3D - 79 357 IPR036457 -
Hepe07g0077 360 FunFam Protein phosphatase 2C 50 90 359 - -
Hepe07g0077 360 SMART PP2C_4 71 350 IPR001932 -
Hepe07g0077 360 ProSiteProfiles PPM-type phosphatase domain profile. 84 352 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1179 Hepe-Chr1:76947647 Hepe07g0077 Hepe-Chr7:740930 1.50e-13 dispersed
Hepe02g3358 Hepe-Chr2:83144466 Hepe07g0077 Hepe-Chr7:740930 3.74e-76 dispersed
Hepe07g0077 Hepe-Chr7:740930 Hepe07g0210 Hepe-Chr7:2014750 1.24e-74 dispersed
Hepe07g0077 Hepe-Chr7:740930 Hepe07g0084 Hepe-Chr7:787530 1.01e-35 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0077 K14497 - csv:101214188 540.421