Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0080 ATGGATGATTGCTCTGGAAAAGCTTCATCAAATGATATAGCAGCTTTCAATTTTGGTATATTTGATGATGCCTTTAAATCCGGCATTGTCTATTCGACTGATTTAATATGGAAATTCTCTTATTGTTACTGGTGGGGTCTGCAGAATCTAAGCTCTTTGGGTCAAGGCCTCAAAACTAGTAGGGATATATGGGAAATTTACTTTGCAGTCTCCCTGACCACTTCTGGTTTGGTATTATTTGCACTTCTAATTGGAAATTTGCAGACAATTCTGCAGGCAACAATCGCAAGACAAGAGGAAATGAGATTGAAGGGGGAAGATATTAAACATTGGATGACCTTCCAGAAACTCCCACATGATGTAAGGGAGAAGATCAAACAATATGAGAAGTATAAATGGCAGAAAACTAGAGGTATCGATGTTGCGAGCATTCTCCTTAATCTTCCTAGAGACCTTAGAAGGGACATTACAAGACATCTTTGCTTCCCTGCAATAAAAAATGTCTCAATGTTTCAAAACGCGGACGAGAAGTTCTTGGATGCAGTTTGTGGTTATCTGAAGCCAGTGCTATACATTGAGCGTAACCTCATCGTTCGTGAAGGAGAGCTGCTAGAGGAGATGATCTTCATAACTAAAGGCAAGTTATGGATCTACTCTGGAGCGCCGGATTCGTTTGGGAGCCTCGACGAAGGCAATTACTTTGGAGAGGATCTTTTAGATTGGGTATTGCAAGATCCACATCAATCCACTGTCCCCATATCCACAAAAACTGTCTCTGCACAGACCAAAGTGGAAGCATTTGTTTTAAGCGCAAAAGATTTGAAGAGTGTCATCTTCAGATTCGGGTGGCTTATCGTTCGAGAGCTTAGAAACGATCCCAACTATAAAGACTTAGAGCAATGGGCACCATGGGCTGCTCTTGTCTTGCAAACTGCATGGGGCCGTTACATCAAGAATAAGAGAAAGCGGAATTCACAAGCTTCAGTCACAAGTACAACAAACACTCATGTCTCTAGATTCATTACTCGTGCATTACATGCTTTAAATCCTCTACGAAAAAGAAGAAATGGAAGAAATGATATGCCGAGACATAGCAGCAACAACAACTTATCAGTTGGTAGCAACGTCTGA 1131 41.11 MDDCSGKASSNDIAAFNFGIFDDAFKSGIVYSTDLIWKFSYCYWWGLQNLSSLGQGLKTSRDIWEIYFAVSLTTSGLVLFALLIGNLQTILQATIARQEEMRLKGEDIKHWMTFQKLPHDVREKIKQYEKYKWQKTRGIDVASILLNLPRDLRRDITRHLCFPAIKNVSMFQNADEKFLDAVCGYLKPVLYIERNLIVREGELLEEMIFITKGKLWIYSGAPDSFGSLDEGNYFGEDLLDWVLQDPHQSTVPISTKTVSAQTKVEAFVLSAKDLKSVIFRFGWLIVRELRNDPNYKDLEQWAPWAALVLQTAWGRYIKNKRKRNSQASVTSTTNTHVSRFITRALHALNPLRKRRNGRNDMPRHSSNNNLSVGSNV 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 765208 767176 - Hsped.07g00800.1 Hepe07g0080 573475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0080 376 MobiDBLite consensus disorder prediction 351 376 - -
Hepe07g0080 376 SUPERFAMILY Voltage-gated potassium channels 33 92 - -
Hepe07g0080 376 Gene3D Helix hairpin bin 96 161 - -
Hepe07g0080 376 CDD CAP_ED 170 278 IPR000595 -
Hepe07g0080 376 SMART cnmp_10 170 293 IPR000595 -
Hepe07g0080 376 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 347 - -
Hepe07g0080 376 SUPERFAMILY cAMP-binding domain-like 97 281 IPR018490 -
Hepe07g0080 376 MobiDBLite consensus disorder prediction 362 376 - -
Hepe07g0080 376 Gene3D Jelly Rolls 168 281 IPR014710 -
Hepe07g0080 376 ProSiteProfiles cAMP/cGMP binding motif profile. 170 251 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0080 Hepe-Chr7:765208 Hepe07g0082 Hepe-Chr7:769969 1.36e-126 dispersed
Hepe07g0079 Hepe-Chr7:758841 Hepe07g0080 Hepe-Chr7:765208 2.29e-176 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0080 K05391 - csv:101214670 483.796