Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0084 ATGGTATGCAGCTACAATATAAGGAATGTGATTGCTCAGGCTGGATATGTAGGAATAATCAACAGAAGGGTTCAAATCAACAATATCTGGAGGAGTTTGCCTTCCAATCTTGGATTTGTTCACACCTGGAAGCGTGAATATAGAACGAATCGCATGATGATGGTCGATACAGGTGCATCAGAAAATCGCGGGCTGGTTGTTGATAAGCATCCTGAGAAAGATGAAGATGGTGGCTATGCCAGTGGAGGATGGAAAAGTGATGATGGGAAACTTAGTTGGGGGTATTCAAGTTTCAGAGGAAAGAGGGTAACCATGGAAGATTTCTTTGATATTAAAATGTCGAAGGTCGATGGTCAAACGGTCTGCCTTTTTGGCATCTTTGATGGTCACGGTGGGTCCCGTGCTGCAGAGTTTTTGAAGGACCATCTCTTTGAGAATCTGATGAAGCATCCAAAATTTTTGAAGGATACCAAATTAGCTATCAGTGAAACGTATCAACAGACCGATGCTGAATTTTTAAATTCGGAAAAAGATACTTTAAGGGACGATGGCTCTACTGCTTCAACAGCTTTGCTAGTTGGCAATCACCTCTATGTTGCCAATGTTGGAGACTCACGTACTATAATATCAAAGGGGGGTGAAGCAATCCCTCTCTCTGAGGACCATAAACCAAATAGAACTGACGAGCGGAGGAGAATTGAAAATGCCGGGGGTGTTGTCATGTGGGCTGGCACTTGGAGGGTAGGAGGAGTGTTAGCAATGTCCCGCGCTTTTGGTAACAAGATGTTGAAGCAGTTTGTGGTGGCAGATCCTGAGATTCAGGATCTTGAAGTAGACAAGGACATCGAGCTGCTCGTTATCGCAACCGATGGACTTTGGGACGTGGTACGCAACGAGGATGCAGTATTAGTTGCAGGGAAGGAAGAAGAACCCGAGGCAGCTGCTCGGAAGCTGACCGAAGCAGCATTTACCCGTGGTAGTGCTGACAATATAACATGCATTGTGGTGAAGTTTCATCACGACAATGCTGGTGCAGGTCCTGCTGCCGCTACTCGAGGAAAGAACTAA 1068 45.51 MVCSYNIRNVIAQAGYVGIINRRVQINNIWRSLPSNLGFVHTWKREYRTNRMMMVDTGASENRGLVVDKHPEKDEDGGYASGGWKSDDGKLSWGYSSFRGKRVTMEDFFDIKMSKVDGQTVCLFGIFDGHGGSRAAEFLKDHLFENLMKHPKFLKDTKLAISETYQQTDAEFLNSEKDTLRDDGSTASTALLVGNHLYVANVGDSRTIISKGGEAIPLSEDHKPNRTDERRRIENAGGVVMWAGTWRVGGVLAMSRAFGNKMLKQFVVADPEIQDLEVDKDIELLVIATDGLWDVVRNEDAVLVAGKEEEPEAAARKLTEAAFTRGSADNITCIVVKFHHDNAGAGPAAATRGKN 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 787530 791665 + Hsped.07g00840.1 Hepe07g0084 573479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0084 355 SUPERFAMILY PP2C-like 90 339 IPR036457 -
Hepe07g0084 355 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169(InterPro)
Hepe07g0084 355 FunFam Probable protein phosphatase 2C 76 84 344 - -
Hepe07g0084 355 CDD PP2Cc 94 338 IPR001932 -
Hepe07g0084 355 Gene3D - 84 343 IPR036457 -
Hepe07g0084 355 ProSiteProfiles PPM-type phosphatase domain profile. 92 338 IPR001932 -
Hepe07g0084 355 PANTHER PROTEIN PHOSPHATASE 75 337 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe07g0084 355 SMART PP2C_SIG_2 90 338 IPR001932 -
Hepe07g0084 355 SMART PP2C_4 82 336 IPR001932 -
Hepe07g0084 355 Pfam Protein phosphatase 2C 96 331 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2750 Hepe-Chr2:76016297 Hepe07g0084 Hepe-Chr7:787530 1.88e-112 dispersed
Hepe05g0665 Hepe-Chr5:11002837 Hepe07g0084 Hepe-Chr7:787530 1.91e-43 dispersed
Hepe07g0084 Hepe-Chr7:787530 Hepe07g0339 Hepe-Chr7:3402805 3.45e-56 dispersed
Hepe07g0077 Hepe-Chr7:740930 Hepe07g0084 Hepe-Chr7:787530 1.01e-35 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0084 K17506 - csv:101203681 673.7