Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0100 ATGATGAAGAATAGCTTCATCTTCCTTCAAATTTTGTTGTTCTTAGCAATCATATGGCCCGGGGTACTCACTGAGCCAGTTGAAGATAAGCAAGCTTTGCTTGATTTCTTCCATAATATCCCCCATTCGCCCTCTCTCAATTGGAATGGGAGTAGTTCAGTATGCAAAGTCTGGACAGGAGTGTTTTGCAACTCTGATGAGTCCAGAGTAGTAGCCCTTCGATTACCCGGGACTGGTCTGCGCGGCTCGATCCCCGTGAATACCCTTAGCCGCCTTTCGGCGCTCGAGACTCTAAGCCTTAGGTTAAATAGGATGTCAGGACCTTTCCCTTCTGATTTTTTGAAGCTGGAAAACTTGAGTTCCTTGTATCTGCAATTCAACAATTTTTCTGGTCCTTTGCCTTTAGATTTTTCGGTTTGGAGGAACCTTAGTGTCATCGATCTATCTAACAATTTATTTAATGGGAGTATTCCTTCTTCTATCTCAAAGTTGAGTCACCTGACAGTTCTGAATCTTGCAAACAACTCGTTTTCAGGCGAAATTCCGAACCTTGATATTCCAAGTTTGCAACGGTTAGATTTGTCCAATAATAGTCTTACAGGAAATGTGCCTCATTCTCTTCAAAGATTTCCAAGTTGGGTGTTCTCCGGTAACAATGTTACTGTAGAACATGGTGCAATTCCCCCATCTATTCCGCTCCAGCCTCCCACCGCTCAACCGAAAAGAAAAGACAAAGGACTAAGTGAATCTGCAATACTGGGTATTGCAATTGGTGGTTCTGTTGTTGGGTTTATTTTGCTAGCTGTTTTGTTGACTGCTTGCTGGTTGAAAAAAGGAAAAGAAAATATGAGTTCCACCATGGAGCCCAAAAAGAAGGAAACATCTGTGAAGAAAAGGGGTTTTGAGAGCCAAGAACAAAAGAACAACCTTACTTTCTTTCAGGATTCTAATCTTGCATTTGACTTGGAAGACCTGTTGAGAGCGTCTGCTGAAGTTCTCGGAAAGGGAACCTTTGGAGTGAGCTACAAGGCTGCTTTGGAGGACTCAACGACTGTGGTAGTGAAGAGGCTGAATCAAGTGACCGTTGGAAAACGAGAATTCGAACAGCAGATGGAGTTGATTGGAAAAATTAAGCATGAGAACATCGTTTCCTTAAGAGCATACTATTATTCAAAAGATGAGAAGCTTATGGTCTATGACTACTATGGACAAGGGAGTGTGTCTGCAATGTTACACGGTAAAGAAGGAGATGGTTTACGTGTGTTAGATTGGGATACCCGGATGAAAATTGCTATTGGAGCGGCTCGAGGTCTAGCTCATATTCACACAGAAAATGGTGGAAAATGTTCCCATGGAAACATCAGAGCCTCAAACATTTTCCTTAACTCTAAAGGATATGGCTGTGTATCCGACTTTGGCTTGGCTGTGTTGATGAATTCAATTCCACTACCAGCCACAAGAACTCCTGGTTACCGAGCCCCTGAAGTGACCGACACTCGGAGAGCATCGGAAGCAGCTGATGTCTACAGTTTCGGGGTGGTGCTGCTGGAGCTTCTGACTGGAAAATCTCCCATACATGTTGAAGGTTGTAATGAAGTTGTTAATTTGGTGAGGTGGGTGAACTCTGTGGTGAGGGAGGAATGGACAGCAGAAGTGTTTGATGTGCAGCTTCTTAGGTATCCAAACATAGAAGAAGAAATGGTGGAGATGCTGCAAATTGGGTTGTCTTGTGTTGCCAAAATGCCCGAACAGAGGCCGAAAATGATGGATATAGCATCGAGAATCGAGCAAGTTCGGCAACTGAGTACCGAAACCCGGCCATCATCCGGGTCAAAATCAGCATATTCGACTCCAGTTCATGCAATGGAAATCGGTTCTTCCTCACATTTACATTGA 1896 43.67 MMKNSFIFLQILLFLAIIWPGVLTEPVEDKQALLDFFHNIPHSPSLNWNGSSSVCKVWTGVFCNSDESRVVALRLPGTGLRGSIPVNTLSRLSALETLSLRLNRMSGPFPSDFLKLENLSSLYLQFNNFSGPLPLDFSVWRNLSVIDLSNNLFNGSIPSSISKLSHLTVLNLANNSFSGEIPNLDIPSLQRLDLSNNSLTGNVPHSLQRFPSWVFSGNNVTVEHGAIPPSIPLQPPTAQPKRKDKGLSESAILGIAIGGSVVGFILLAVLLTACWLKKGKENMSSTMEPKKKETSVKKRGFESQEQKNNLTFFQDSNLAFDLEDLLRASAEVLGKGTFGVSYKAALEDSTTVVVKRLNQVTVGKREFEQQMELIGKIKHENIVSLRAYYYSKDEKLMVYDYYGQGSVSAMLHGKEGDGLRVLDWDTRMKIAIGAARGLAHIHTENGGKCSHGNIRASNIFLNSKGYGCVSDFGLAVLMNSIPLPATRTPGYRAPEVTDTRRASEAADVYSFGVVLLELLTGKSPIHVEGCNEVVNLVRWVNSVVREEWTAEVFDVQLLRYPNIEEEMVEMLQIGLSCVAKMPEQRPKMMDIASRIEQVRQLSTETRPSSGSKSAYSTPVHAMEIGSSSHLH 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 950420 953752 - Hsped.07g01000.1 Hepe07g0100 573495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0100 631 ProSiteProfiles Protein kinase domain profile. 327 598 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0100 631 PANTHER OS05G0588300 PROTEIN 11 611 IPR050994 -
Hepe07g0100 631 SUPERFAMILY Protein kinase-like (PK-like) 331 595 IPR011009 -
Hepe07g0100 631 FunFam pollen receptor-like kinase 1 296 401 - -
Hepe07g0100 631 Pfam Leucine Rich Repeat 142 164 IPR001611 GO:0005515(InterPro)
Hepe07g0100 631 Pfam Leucine Rich Repeat 166 183 IPR001611 GO:0005515(InterPro)
Hepe07g0100 631 Pfam Leucine Rich Repeat 188 209 IPR001611 GO:0005515(InterPro)
Hepe07g0100 631 Pfam Leucine Rich Repeat 118 138 IPR001611 GO:0005515(InterPro)
Hepe07g0100 631 Pfam Protein tyrosine and serine/threonine kinase 331 594 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g0100 631 FunFam Probable inactive receptor kinase RLK902 26 185 - -
Hepe07g0100 631 SUPERFAMILY L domain-like 38 212 - -
Hepe07g0100 631 Gene3D Phosphorylase Kinase; domain 1 291 401 - -
Hepe07g0100 631 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 402 609 - -
Hepe07g0100 631 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Hepe07g0100 631 Gene3D Transferase(Phosphotransferase) domain 1 403 616 - -
Hepe07g0100 631 Gene3D Ribonuclease Inhibitor 27 234 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0100 Hepe-Chr7:950420 Hepe08g0676 Hepe-Chr8:6049883 5.89e-146 dispersed
Hepe06g1498 Hepe-Chr6:65559262 Hepe07g0100 Hepe-Chr7:950420 7.04e-205 wgd
Hepe06g0764 Hepe-Chr6:54192525 Hepe07g0100 Hepe-Chr7:950420 5.85e-197 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72901 PF00069 Pkinase 6.10E-35 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0100 - - - 0.0