Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0143 ATGCCTTCATGGTGGGGGAAGTCCTCATCCAAAGAAGTGAAGAAGAAAACGAGCAAAGAAAGTTTCATCGACTCATTACACCGTAAGTTTAAGAATTCACCTGAAGGTAAAGTAAGCAGCAGATCAGGAGGTTCTCGTAGACGTGGTGGTGACACTATATCCGAGAAGGGATCTAAATCACCTCTATCAAGATCACCATCACCTTCCAAAGAAGTATCTAGATGTCAAAGTTTTGCTGAAAGATCACGTTCTCACCAACTTCCACTTCCAGATTTGCACCCTGTAGGTGTAGGTCGCACAGACTCTGGGATTAGTGTGACAGCAAAATCAAAATTAGAGAGAAGCTCCAAGACATCTTCATTCCTACCCCTCCCTCGACCAGCATGTATTCGAAGTAGGCCAGATCCTGCGGATTTGGATGGAGATTTGGTCACTGGTTCAGTCTCTGGTGAGTCCTCGAGTGATAGTGATGATCCCAATGATTCACGTCAACGTAGTCCTCAGGCAACGGACTATGACATTGGGACTAGAACTGTGATAGGTTCTACTGAACCTAGTGCAACTCTCAAAGATCAGTCTCCTACTGTCGTGCAAATAAATTTAAAAGAGGGAAAGAAAGCGGAAAGTCTTTCATTTCCTCATAAGAAGTCTTCCATACCTAAACGGAGGCCTTTAAGCAGCAATGTAACAAATCTACAAGTTCCTCGCCATGGGGCTTTCTTTAGCGCTCCAGATAGTTCCATGTCTAGTCCCTCTAGAAGTCCTATGAGGGTATTTAGCACTGAGCAAGTCATGAACACTGCTGTTTGGGCTGGAAAATCTCACCCAGATGTCATTTTAGGTGGATCTGGCCACTGCTCCAGTCCTGGTTCTGGTCACAATTCAGGGCACAACTCGATGGGAGGTGATATGGCGGGCCACTTCTTTTGGCAACAAAGTAGGGGTAGCCCCGAGTATTCTCCAGTACCTAGTTCTAGAATGACTAGCCCCGGCCCTAGTTCCAGAATTCAAAGTGGTGCTGTTACACCTATTCATCCTAGAGCAGGAGCTCCACCTGCTGAGTCACAAACGTGCTGGCCTGATGAGAAACAAACTCATCGTTTGCCGCTTCCTCCCATAGCAATCTCAAACTCTTCTCCATTTTCTCATTCAAATTCAGCAGTGACATCTCCTTCAGTGCCTAGGAGTCCAGGAAGGACAGAGACTCCAGCAAGCCCCGGTTCACGCTGGAAAAAAGGGAAGCTACTGGGTAGGGGCACATTTGGGCACGTATATGTTGGTTTTAATAGCGAAAGTGGAGAAATGTGTGCAATGAAGGAGGTCACGTTATTTTCTGATGATGCAAAGTCTAAGGAAAGTGCTAAACAATTAATGCAGGAAATTGCTTTACTGAGTCGTTTGCGGCATCCCAACATTGTGCAGTATTATGGTTCGGAAACAGTGTGTGATAAACTCTATATATATCTGGAATATGTATCTGGTGGCTCTATTTATAAATTACTACAAGACTATGGACAATTTGGGGAACTAGCAATTCGTAGCTATACTCAACAAATACTATCAGGGCTTGCATATTTGCATGCTAAAACTACAGTTCACAGGGACATTAAAGGAGCAAACATACTTGTTGACCCAAATGGTCGTGTTAAATTGGCAGACTTTGGGATGGCGAAGCATATCACAGGCCAGTCATGTCCACTGTCGTTTAAGGGCAGCCCTTACTGGATGGCACCCGAGGTCATAAAGAACTCAAATGGTTGCAACCTTGCCGTTGATATATGGAGTCTTGGATGTACTGTTCTGGAGATGGCTACTACAAAGCCACCTTGGAGCCAGTATGAAGGGGTTGCTGCGATGTTTAAGATTGGTAATAGCAAAGAACTCCCAATAATTCCAGAGCACCTCTCAGATGATGGGAAGGATTTCGTGAGACTATGTCTGCAACGAAACCCGCATCATCGACCTACAGCTGCTCAACTTTTGGAGCATCCTTTTGTCAAATATGCTGCACCTGTAGAGAGGCCTATTTTTAGCTCTGAACCTTCTGATGCAACACCCGGGGTTACAAACGGAGTGAAGACTTTGGTACACAATACTTTTTCACATTGCTTTTTGAATCTTTGA 2124 44.82 MPSWWGKSSSKEVKKKTSKESFIDSLHRKFKNSPEGKVSSRSGGSRRRGGDTISEKGSKSPLSRSPSPSKEVSRCQSFAERSRSHQLPLPDLHPVGVGRTDSGISVTAKSKLERSSKTSSFLPLPRPACIRSRPDPADLDGDLVTGSVSGESSSDSDDPNDSRQRSPQATDYDIGTRTVIGSTEPSATLKDQSPTVVQINLKEGKKAESLSFPHKKSSIPKRRPLSSNVTNLQVPRHGAFFSAPDSSMSSPSRSPMRVFSTEQVMNTAVWAGKSHPDVILGGSGHCSSPGSGHNSGHNSMGGDMAGHFFWQQSRGSPEYSPVPSSRMTSPGPSSRIQSGAVTPIHPRAGAPPAESQTCWPDEKQTHRLPLPPIAISNSSPFSHSNSAVTSPSVPRSPGRTETPASPGSRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLMQEIALLSRLRHPNIVQYYGSETVCDKLYIYLEYVSGGSIYKLLQDYGQFGELAIRSYTQQILSGLAYLHAKTTVHRDIKGANILVDPNGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPIIPEHLSDDGKDFVRLCLQRNPHHRPTAAQLLEHPFVKYAAPVERPIFSSEPSDATPGVTNGVKTLVHNTFSHCFLNL 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1310318 1317363 + Hsped.07g01430.1 Hepe07g0143 573538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0143 707 ProSitePatterns Protein kinases ATP-binding region signature. 416 439 IPR017441 GO:0005524(InterPro)
Hepe07g0143 707 MobiDBLite consensus disorder prediction 371 403 - -
Hepe07g0143 707 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 43 669 IPR050538 -
Hepe07g0143 707 MobiDBLite consensus disorder prediction 313 340 - -
Hepe07g0143 707 MobiDBLite consensus disorder prediction 286 412 - -
Hepe07g0143 707 MobiDBLite consensus disorder prediction 103 122 - -
Hepe07g0143 707 SUPERFAMILY Protein kinase-like (PK-like) 397 676 IPR011009 -
Hepe07g0143 707 MobiDBLite consensus disorder prediction 56 83 - -
Hepe07g0143 707 MobiDBLite consensus disorder prediction 1 194 - -
Hepe07g0143 707 MobiDBLite consensus disorder prediction 165 194 - -
Hepe07g0143 707 CDD STKc_MEKK1_plant 409 666 - -
Hepe07g0143 707 Gene3D Transferase(Phosphotransferase) domain 1 408 685 - -
Hepe07g0143 707 SMART serkin_6 410 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0143 707 ProSiteProfiles Protein kinase domain profile. 410 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0143 707 FunFam Mitogen-activated protein kinase kinase kinase 408 691 - -
Hepe07g0143 707 MobiDBLite consensus disorder prediction 9 54 - -
Hepe07g0143 707 Pfam Protein kinase domain 411 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1817 Hepe-Chr2:27204815 Hepe07g0143 Hepe-Chr7:1310318 1.55e-33 dispersed
Hepe02g2333 Hepe-Chr2:67726739 Hepe07g0143 Hepe-Chr7:1310318 1.76e-73 dispersed
Hepe04g1109 Hepe-Chr4:65970456 Hepe07g0143 Hepe-Chr7:1310318 1.74e-138 dispersed
Hepe07g0143 Hepe-Chr7:1310318 Hepe10g0698 Hepe-Chr10:9319327 2.27e-99 dispersed
Hepe10g1099 Hepe-Chr10:43535772 Hepe07g0143 Hepe-Chr7:1310318 1.80e-17 dispersed
Hepe07g0143 Hepe-Chr7:1310318 Hepe06g0686 Hepe-Chr6:50954140 0.0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72905 PF00069 Pkinase 7.50E-71 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0143 K20717 - csv:101214961 1230.31