Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0176 ATGCCTAGTAGTGCAATTGCTGACCCGAGTTTTCTGGCTTACCCAATTCCCACTTCAATGCCTAGCTCCTCTGAATTCTCAAGTTCCATTAGGAAAATGGATGGTTATGGAGAAGTTTGTCTGCTTGAAGACGCCTTTGATCCGAGCGGAGTTGTGAGGACAAGGGAAGATGAATATGATAGCAGATCAGGCAGCGACAACATCGATGGTGCCGTATCTGGGGACGATCAAGATGCTAACGACGAACAACCACCGAAAAGGAAGAAGTACCATAGGCATACTCCCAATCAGATCCAAGAGCTTGAGATTTTCTTCAAGGAATGTCCTCATCCCGATGATAAACAAAGAAGTGAGCTCAGTAGGAGGCTTGGTTTGGAGACAAAGCAAGTGAAGTTTTGGTTTCAAAATCGTCGAACACAGATGAAGACACAAATAGAACGCCATGAGAATGCAATTCTTAAGCAAGAAAACGATAAGCTCCGGGCCGAGAACAGTGTGATGAAGGATGCTATTTCAAACCCAACGTGCAATACGTGTGGTGGCCCTTCAATTCCTGTTCATCTATCATTTGAAGAACATCAGCTTAGGATTGAGAATGCCAGATTAAGAGACGAACTGCACCGGTTATATACTGTCACCAACAAGTTCTTGGGCTGGCCAACCTATGTCAATCATGACTCTTCACCAAGTTCTGAATCTTGCTTGGAACTTTCTGTAGGAAGAAGTGGAATGGGAAGCTTGAGTACCATTTCTGATCCTATTTCTATGGGGCTTAACTTGGGAAATGGACTTTTTAGTCCTGGCCCTGTGATGTCTATTAGTAAACCTGAAATAGTCATGCCATGCAATGATATACCACTTGAGAGAACAATTTATGTGGATCTTGCTTTGGCAGCTATGGATGAATTAGTTAAGATGGCTCAAATGGATAGTCCCCTTTGGATCAGAAGTCGGGACAGCGGTGGCAAAGAGACACTGAACCTTGATGAATATTCAAGGACATTTCCTTCTTCGGCTGGCATGAAGCACAGTAATTGGACAACAGAGGCTACCAGAGATACTACAATGGTCATCATCAACAGCTTGGCACTTGTCGAGACGTTGATGGACGCAAACCGATGGGCAGAAATGTTTCCTTGCTTGATTGCTAGAGCTACTACAATCGATGTGATATCAAGTGGCATGGGTGGAACTAGAAATGGTGCATTACAATTGATGCATGCTGAACTTCGAGTACTTTCCCCGCTCGTTCCTGTTCGTACACTTAGGTTCCTCCGCTTCTGCAAGCAGCATGCTGATGGTCTATGGGTTGTAGTTGATGTTTCCATCGGAGAAGGTTCGAATTCAAACTCGTTTTTCGGTTGCAGGAGGCTCCCTTCGGGCTGTGTTGTGCAGGATATGCCTAATGGTTTCTCCAAGGTTGCATGGGTGGAACATACAGAATATGATGAGACTGTTATGCACCATCTTTACCGCCAGCTAATTAGTTCGGGCATCGGCTTCGGTTCACAACGGTGGCTTGCTACCCTTCAAAGACAATGCGACTGTTTGACAATTCTTATGTCTTCTACTATCCCTTCCGAAGATCCTTCAGGAATATCGCCCTGCGGTAGGAGAAGTATGCTGAAACTATCCCAGCGTATGGTCGACAACTTCTGTTCTGGAGTTTGTACTTCGTCTTTGCTCAAGTGGGACAAGCTTGTTGTTGGCAATGTAAGTGAAGATGTAAAAGTGATGGCTAGAAAGAGCATCGACGATCCTGGCGAGCCACCGGGTATTGTGTTGAGTGCTGCAACTTCCGTTTGGATGCCAGTAACACAGCAGAGGTTGTTTGCATTCTTGCAAGACGAGCGCTTACGGAGTGAGTGGGACATTTTATCCAATGGCAGGCCAATGCTAGAGATGATTCACATCTCAAAGGGCCAGGGACCGGAAAACCGTGTTTCTCTAATGCGTGCTAATCCCATGAATGCTAATGAGAGCACCATGCTCATATTGCAAGAGACTTGGACTGATATATCAGGCTCACTGATTGTTTACGCTCCAGTCGACACAACCGCGGTTAATTTGGTGATGCGCGGAGGAGATTCTGCTTATGTATCGCTATTACCATCAGGATTCGCAATCCTCCCCAATGGTTCATCGAACGACAAAAACGCTTCGGTCAAGTCAGACATTAACAGTGGCCATGGTGGTGGATGCCTGCTCACAGTTGCATTCCAAATTTTGGTGAATAGCCTTCCAACAGCCAAACTCACCATCGAGTCAGTTGAGACGGTTAACAATCTCATTTCTTGCACCATCCAAAAGATCAAAACCTCCCTTCAGGTATCGTAA 2337 45.53 MPSSAIADPSFLAYPIPTSMPSSSEFSSSIRKMDGYGEVCLLEDAFDPSGVVRTREDEYDSRSGSDNIDGAVSGDDQDANDEQPPKRKKYHRHTPNQIQELEIFFKECPHPDDKQRSELSRRLGLETKQVKFWFQNRRTQMKTQIERHENAILKQENDKLRAENSVMKDAISNPTCNTCGGPSIPVHLSFEEHQLRIENARLRDELHRLYTVTNKFLGWPTYVNHDSSPSSESCLELSVGRSGMGSLSTISDPISMGLNLGNGLFSPGPVMSISKPEIVMPCNDIPLERTIYVDLALAAMDELVKMAQMDSPLWIRSRDSGGKETLNLDEYSRTFPSSAGMKHSNWTTEATRDTTMVIINSLALVETLMDANRWAEMFPCLIARATTIDVISSGMGGTRNGALQLMHAELRVLSPLVPVRTLRFLRFCKQHADGLWVVVDVSIGEGSNSNSFFGCRRLPSGCVVQDMPNGFSKVAWVEHTEYDETVMHHLYRQLISSGIGFGSQRWLATLQRQCDCLTILMSSTIPSEDPSGISPCGRRSMLKLSQRMVDNFCSGVCTSSLLKWDKLVVGNVSEDVKVMARKSIDDPGEPPGIVLSAATSVWMPVTQQRLFAFLQDERLRSEWDILSNGRPMLEMIHISKGQGPENRVSLMRANPMNANESTMLILQETWTDISGSLIVYAPVDTTAVNLVMRGGDSAYVSLLPSGFAILPNGSSNDKNASVKSDINSGHGGGCLLTVAFQILVNSLPTAKLTIESVETVNNLISCTIQKIKTSLQVS 778
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1574301 1579398 - Hsped.07g01760.1 Hepe07g0176 573571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0176 778 SUPERFAMILY Bet v1-like 546 772 - -
Hepe07g0176 778 Coils Coil 138 170 - -
Hepe07g0176 778 Pfam Homeodomain 87 142 IPR001356 GO:0003677(InterPro)
Hepe07g0176 778 SUPERFAMILY Bet v1-like 286 515 - -
Hepe07g0176 778 ProSiteProfiles 'Homeobox' domain profile. 84 144 IPR001356 GO:0003677(InterPro)
Hepe07g0176 778 MobiDBLite consensus disorder prediction 1 29 - -
Hepe07g0176 778 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 74 776 IPR042160 -
Hepe07g0176 778 FunFam Homeobox-leucine zipper protein HDG1 73 160 - -
Hepe07g0176 778 CDD START_ArGLABRA2_like 294 514 - -
Hepe07g0176 778 ProSitePatterns 'Homeobox' domain signature. 119 142 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Hepe07g0176 778 SUPERFAMILY Homeodomain-like 71 144 IPR009057 -
Hepe07g0176 778 ProSiteProfiles START domain profile. 285 519 IPR002913 GO:0008289(InterPro)
Hepe07g0176 778 SMART HOX_1 86 148 IPR001356 GO:0003677(InterPro)
Hepe07g0176 778 FunFam Homeobox-leucine zipper protein GLABRA 2 294 515 - -
Hepe07g0176 778 CDD homeodomain 87 144 IPR001356 GO:0003677(InterPro)
Hepe07g0176 778 Gene3D - 73 160 - -
Hepe07g0176 778 Pfam START domain 295 515 IPR002913 GO:0008289(InterPro)
Hepe07g0176 778 MobiDBLite consensus disorder prediction 51 94 - -
Hepe07g0176 778 SMART START_1 294 516 IPR002913 GO:0008289(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1543 Hepe-Chr3:72277456 Hepe07g0176 Hepe-Chr7:1574301 6.92e-149 dispersed
Hepe04g1781 Hepe-Chr4:72715185 Hepe07g0176 Hepe-Chr7:1574301 3.38e-205 dispersed
Hepe07g0176 Hepe-Chr7:1574301 Hepe07g2012 Hepe-Chr7:64331400 1.49e-221 dispersed
Hepe03g0511 Hepe-Chr3:8847067 Hepe07g0176 Hepe-Chr7:1574301 4.99e-319 wgd
Hepe05g1917 Hepe-Chr5:69520936 Hepe07g0176 Hepe-Chr7:1574301 1.50e-255 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55878 PF01852 START 8.80E-47 CL0209 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0176 K09338 - csv:101218216 1369.76