Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0183 ATGGCATCTTCTCGTCTGACTGGAGGATTAGCGCAGTCTTCATCAAGTTCTGGGATTTTCTACCAAGGAGAAGGGCAGTCCTCAGCTATTGTTAATTCTCACTTGAGCCAATCATTTGCAAATTCATCAAATTCAATTCCAGGAGCTGGATGTTCTGATTTTTGTCCAGTTTCTGGAGACATGAATAATGCAGTTTTAAATAGTGTGGCGAATTCAGGACCCAGTGTTGGTGCTAGTTCATTAGTTACAGATGCAAACTCTGCCCTATCAGGGGGTCCTCATTTGCAAAGGAGTGCAAGCATCAATACAGAGTCATACATGCGTTTGCCTGCATCGCCTATGTCATTCAACTCAAATAACATTAGTGTGTCAGGGTCCTCCGTTATAGATGGATCCTGCGTAGTGCAGCAAAATTCTCAACAGGACCAAAATATGCAACACATGCAGCAACAGGCACGGCAAGGTGCTTCACATGCGACATCATTACCAACATCACAAATAGGCCAAGTATCACTTCCAATGGGGGCAAAACTTCGGGGATCTTTCATTCCAGATCCAAATGACTATTCTCAGGTGCAGAAGAAACCACGACTGGATATAAAGCAGGAAGATGTGCTGCAGCAGCAAGTTTTGCAGCAGCTATTTCAGAGACAGGATTCCATGCAGTCACAAAACCGTAACTCACAGTTACAAGCTTTATTTCAACAACAAAGAATGCGGCAACAGCAGCAGATTTTGCAGTCTCTACCTCAGTACAGAGCTCAGTTGCAGCAACAGCAGTTTCAGCAGCAACAGCAGCAGCAGCAGCAGATACAGTTGAGGCAGCAATTGCAACAGCAGCAGGCAATGCAGCCAGTATCACCCATGAAGCGGCCCCCATATGATGGTGGTGGTGTTTGTGCTCGTCGGCTGATGCAATATCTATATCATCAGCGGCAAAGACCTCCTGAGAATAGTATAGCCTACTGGAGAAAGTTTGTAACAGAGTATTACTCTCCTCGTGCAAAGAAAAGATGGTGCTTGTCATTGTATGAGAATGTTGGCCACCATGCTCTTGGTGTGTTTCCCCAGGCAGCTATGGATGCGTGGCATTGCGACATCTGTGGTTCAAAATCAGGAAGGGGCTTTGAGGCTACGTTTGAAGTACTCCCAAGACTCAGCGAGATCAAATTTGGAAGTGGAGTTATTGACGAGCTTTTATTCCTGGACCTTCCTCAAGAAAGGAGATTTCCTTCTGGAATTATGACGTTAGAATATGGAAAAGCAATTCAAGAGAGTGTATATGAGCAACTTCGTGTTGTTCGTGAGGGTCAGCTTCGTATCATATTCACACAAGACTTGAAGATTTTGTCTTGGGAATTTTGTGCAAGACGTCATGAGGAACTTCTTCCACGTAGGTTGGTTGCACCTCAGGTGAATCAGCTGGTACAGGTTGCCCAGAAATGCCAAAACACAATTGCTGAAAGTGGGCCTGATGGTGTTTCTCAGAAAGATTTGCAGACAAATAGCAATATGGTACTGACGGCCGGTCGTCAGCTTGCTAAGAGTCTGGAGTTGCAGTTGCTGAATGACTTGGGGTTCTCTAAAAGATACGTGAGGTGTTTGCAGATATCAGAGGTTGTCAACAGTATGAAAGATCTGATTGGTTTCTGCCGGGACCAAAAAGCTGGGCCTATTGAGGGCTTGAAAAATTATCCTAGACATGCCACTGCAGCCAAGCTTCAGATGCAAAAAATGCAGGAGATGGAGCAGTTAGCGAGTATTCAAGGTCTTCCCACAGACCGCAGCACAATTAATAAGCTGATGGCAATGCATCCTGAACTTGATAACCATGGGATGAACAACCATCAGATGATTGGTCGAGGAGGTTTTAGTGGTTCGGCACAAGCTGCTTTGGCAATGACAACATACCAGAATATCCTCATGAGACAAAACTCTATGAATTCCAACCCCAGCCCACATCAACAGGATGCCTCGTCTTCTTTCAATAATTCCAACTATAATTCATCCCCTACACTCCAGGGGACTGCATCCTTGATGCCTGGATCCATACAGAACTCCTCTGTGGGTGGCTTTTCAAGCGTCCAGCAATCCTTGCAAAAGCAATCGCAGCAGCAGCTGCAACAGCACCCACCAAATGCTGGCTCCTTGGTCCAACAAAATCATCCTCAGACGATTCAAGGTAGCCAGGCCCTACAGCAACAGATGATGATCCAGCAACTACTGCAGATGTCAAGTAACAGTAAGAGTGGTGGTTTACAACAGCAGCAGCCCCTTACCGGACCGAATGCAAATAGAAGTATGGGAAGGAGGGGTATGGGTTTTGTGGGCAATGCCTCAGTTGCAGCTGTGGGATCTGGAAATCTGTCTGGGAGCAATGTCCCCGCTCCAAGCAGAAGCAATAGCTTCAAAGCTGCTGCTTCAAATAGCGAGTCCTCTGCTGGTAACAGTGGATACAATCAAAAGGCCTCTGATTTGGCGCAAGATCTTCATCTGCCAGAGGGTCTGGTTGATGATATAGGCCAAGACTTCCCCGAAAACGGGTTTATTAACAATGATCTCGATGACGATTTGGGTTATGTCTGGAAGGCTTGA 2595 46.01 MASSRLTGGLAQSSSSSGIFYQGEGQSSAIVNSHLSQSFANSSNSIPGAGCSDFCPVSGDMNNAVLNSVANSGPSVGASSLVTDANSALSGGPHLQRSASINTESYMRLPASPMSFNSNNISVSGSSVIDGSCVVQQNSQQDQNMQHMQQQARQGASHATSLPTSQIGQVSLPMGAKLRGSFIPDPNDYSQVQKKPRLDIKQEDVLQQQVLQQLFQRQDSMQSQNRNSQLQALFQQQRMRQQQQILQSLPQYRAQLQQQQFQQQQQQQQQIQLRQQLQQQQAMQPVSPMKRPPYDGGGVCARRLMQYLYHQRQRPPENSIAYWRKFVTEYYSPRAKKRWCLSLYENVGHHALGVFPQAAMDAWHCDICGSKSGRGFEATFEVLPRLSEIKFGSGVIDELLFLDLPQERRFPSGIMTLEYGKAIQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQNTIAESGPDGVSQKDLQTNSNMVLTAGRQLAKSLELQLLNDLGFSKRYVRCLQISEVVNSMKDLIGFCRDQKAGPIEGLKNYPRHATAAKLQMQKMQEMEQLASIQGLPTDRSTINKLMAMHPELDNHGMNNHQMIGRGGFSGSAQAALAMTTYQNILMRQNSMNSNPSPHQQDASSSFNNSNYNSSPTLQGTASLMPGSIQNSSVGGFSSVQQSLQKQSQQQLQQHPPNAGSLVQQNHPQTIQGSQALQQQMMIQQLLQMSSNSKSGGLQQQQPLTGPNANRSMGRRGMGFVGNASVAAVGSGNLSGSNVPAPSRSNSFKAAASNSESSAGNSGYNQKASDLAQDLHLPEGLVDDIGQDFPENGFINNDLDDDLGYVWKA 864
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1620833 1628392 - Hsped.07g01830.1 Hepe07g0183 573578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0183 864 Coils Coil 263 283 - -
Hepe07g0183 864 MobiDBLite consensus disorder prediction 746 764 - -
Hepe07g0183 864 MobiDBLite consensus disorder prediction 746 773 - -
Hepe07g0183 864 MobiDBLite consensus disorder prediction 138 164 - -
Hepe07g0183 864 MobiDBLite consensus disorder prediction 645 720 - -
Hepe07g0183 864 MobiDBLite consensus disorder prediction 790 822 - -
Hepe07g0183 864 PANTHER LIM DOMAIN-BINDING PROTEIN 15 853 IPR029005 GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER)
Hepe07g0183 864 Pfam LIM-domain binding protein 303 563 IPR029005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2754 Hepe-Chr2:76062920 Hepe07g0183 Hepe-Chr7:1620833 3.23e-103 transposed
Hepe06g1292 Hepe-Chr6:62946256 Hepe07g0183 Hepe-Chr7:1620833 0.0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0183 - - - 0.0