Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0191 ATGATGATCATGTCTCATAATTCTCCACCCAAGTTCCGCGGAATCCGTAGCCGAAGTGGCAAATGGGTCTCTGAAATTCGCGAGCCACGTAAGACCACTCGCATTTGGCTTGGTACCTACCCCACCCCTGAGATGGCCGCCGCCGCCTACGACGTCGCCGCCCTCGCTCTCAAAGGCCCCGATGCCTCCCTTAATTTCCCTGATTCTCTTTTATCCTACCGCATTCCCTCCTCCACTTCCGCCTCTGATATTCGCGCCGCCGCTGCCATTGCCGCCGCTTCGAGACAACCCAATAATTATAAGCCTGATCATGCTCCTTCTTCTTCTACTGCTGCTGATGGCGGTGGGCCATCTTCTTCCGTCGGTGAGTTTGTCGACGAGGAAGAGTTACTGAACATGCCCAATTTACTGGTGGACATGGCCGGGGGAATGCTCCTCAGCCCCCCTCGGATTAACTCTCCCTCTTCTGATGATCACTCTCCCACTAATTCTCAAGGGGACGCTGGATTATGGAGTTACTCCTAA 525 54.29 MMIMSHNSPPKFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGPDASLNFPDSLLSYRIPSSTSASDIRAAAAIAAASRQPNNYKPDHAPSSSTAADGGGPSSSVGEFVDEEELLNMPNLLVDMAGGMLLSPPRINSPSSDDHSPTNSQGDAGLWSYS 174
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1706803 1707678 + Hsped.07g01910.1 Hepe07g0191 573586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0191 174 Pfam AP2 domain 10 59 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g0191 174 SMART rav1_2 11 73 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g0191 174 ProSiteProfiles AP2/ERF domain profile. 11 67 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g0191 174 PRINTS Ethylene responsive element binding protein signature 12 23 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g0191 174 PRINTS Ethylene responsive element binding protein signature 49 69 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g0191 174 FunFam Ethylene-responsive transcription factor 2 11 68 - -
Hepe07g0191 174 MobiDBLite consensus disorder prediction 147 174 - -
Hepe07g0191 174 Gene3D AP2/ERF domain 11 68 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g0191 174 MobiDBLite consensus disorder prediction 100 116 - -
Hepe07g0191 174 MobiDBLite consensus disorder prediction 149 174 - -
Hepe07g0191 174 MobiDBLite consensus disorder prediction 93 122 - -
Hepe07g0191 174 SUPERFAMILY DNA-binding domain 11 69 IPR016177 GO:0003677(InterPro)
Hepe07g0191 174 CDD AP2 10 69 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g0191 174 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 7 173 IPR045277 GO:0003700(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1007 Hepe-Chr4:64689044 Hepe07g0191 Hepe-Chr7:1706803 4.33e-07 dispersed
Hepe06g1228 Hepe-Chr6:61983972 Hepe07g0191 Hepe-Chr7:1706803 1.91e-58 dispersed
Hepe07g0191 Hepe-Chr7:1706803 Hepe07g0193 Hepe-Chr7:1724985 2.43e-31 dispersed
Hepe07g0191 Hepe-Chr7:1706803 Hepe07g0192 Hepe-Chr7:1719533 4.83e-31 tandem
Hepe06g1584 Hepe-Chr6:66597853 Hepe07g0191 Hepe-Chr7:1706803 3.03e-52 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55880 PF00847 AP2 2.80E-11 CL0081 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0191 - - - 0.0