Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe07g0192 | ATGGAATCTTTTTCAAGTTTTTATGAAGATTATAACTTGTCGAGCTCTGAGAGTAGTAATTGCCGGCGGGTTCTTTTTTCCGATGAGGAGGTTATGTTATTGGCGGCGAGCATTCCGAAGAAGAGGGCCGGCCGGAAGAAGTTTAAGGAGACGAGGCATCCAGTTTACAGAGGAGTCAGGCGGAGGAATTCCGGCAAGTGGGTCTGTGAAGTCAGAGAGCCCAATAAGAAGTCGAGGATTTGGCTTGGCACTTTTCCCACGGCGGAGATGGCGGCGAGAGCCCACGACGTGGCGGCGATGGCGCTTAGAGGTCGGTCTGCTTGTCTCAATTTCGCCGATTCTGCTTGGCGGCTGCCGGTGCCGGCTTCTGCTGACGCCAGGGATATTCAGAAGGCGGCTTCGGAAGCGGCGGAGGCATTCCGGACGGCTGAGTCAGATGGGTCTTCCGTGGATGATTCTAGGCCGGAAAATGAGATGACGGCGGAGACGGCGGCGCTGGAAAACGTGTTGTACATGGATGAGGAGGCAGTTTTTGGGCTGCCGGGATTGTTGGAGGATATGGCTGCGGGGATGATGTTGCCTCCACCTCAGCATTTTCGTGATGACATGGACTTTTACTCTGACGTGTCATTATGGAGCTATTAA | 645 | 53.8 | MESFSSFYEDYNLSSSESSNCRRVLFSDEEVMLLAASIPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMALRGRSACLNFADSAWRLPVPASADARDIQKAASEAAEAFRTAESDGSSVDDSRPENEMTAETAALENVLYMDEEAVFGLPGLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY | 214 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 1719533 | 1720454 | + | Hsped.07g01920.1 | Hepe07g0192 | 573587 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe07g0192 | 214 | Gene3D | AP2/ERF domain | 55 | 113 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe07g0192 | 214 | PRINTS | Ethylene responsive element binding protein signature | 56 | 67 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe07g0192 | 214 | PRINTS | Ethylene responsive element binding protein signature | 78 | 94 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe07g0192 | 214 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D | 12 | 214 | IPR045277 | GO:0003700(InterPro) | |
Hepe07g0192 | 214 | SMART | rav1_2 | 55 | 118 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe07g0192 | 214 | FunFam | Ethylene-responsive transcription factor 2 | 54 | 113 | - | - | |
Hepe07g0192 | 214 | ProSiteProfiles | AP2/ERF domain profile. | 55 | 112 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe07g0192 | 214 | CDD | AP2 | 56 | 114 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe07g0192 | 214 | SUPERFAMILY | DNA-binding domain | 55 | 114 | IPR016177 | GO:0003677(InterPro) | |
Hepe07g0192 | 214 | Pfam | AP2 domain | 54 | 104 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe06g1290 | Hepe-Chr6:62893022 | Hepe07g0192 | Hepe-Chr7:1719533 | 2.69e-82 | dispersed | |
Hepe06g1584 | Hepe-Chr6:66597853 | Hepe07g0192 | Hepe-Chr7:1719533 | 3.27e-36 | dispersed | |
Hepe06g1585 | Hepe-Chr6:66641665 | Hepe07g0192 | Hepe-Chr7:1719533 | 5.20e-64 | dispersed | |
Hepe07g0192 | Hepe-Chr7:1719533 | Hepe10g0364 | Hepe-Chr10:3964166 | 5.08e-32 | dispersed | |
Hepe07g0191 | Hepe-Chr7:1706803 | Hepe07g0192 | Hepe-Chr7:1719533 | 4.83e-31 | tandem | |
Hepe07g0192 | Hepe-Chr7:1719533 | Hepe07g0193 | Hepe-Chr7:1724985 | 1.05e-147 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55881 | PF00847 | AP2 | 1.10E-15 | CL0081 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe07g0192 | - | - | - | 0.0 |