Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0210 ATGATTTCGATGGAGGTTTACCGTAGAATGCTAGAAGATGATGCAGCCAAATGTCGGGAGCGTCGGATGATTTCGCTGGAGGTTTACCGTAGAATGCTAAGCGTAGAAGTTGATGCGGCCAAATGCCGAGAGCGCCGACACCGTAGAATAGTGATGAGACGATTAGCAACAATACCATCGACGAAGGCGAACTCGCCTTCGCCTTCGTCCAGTCACAACCGGAAGGAGAACCAAACCAAGAGTTTCGGTCTTGAGAAGAAGCATGTGTGGAAGATGGACGGTAAGGGTGCTCCGAAGATTTCATCTTCATTATCGAAGGAGGATGTGAAGACTGTTGATGTTGTACCTTCACCGTTAGTATTTCAACCGCAGTTCGGGACGATGTCGGTGTGTGGAAGGTCACGTAAAATGGAGGATGCAATATCGGCAAGCACGTGTCTTTTTGGTCCAAAAAATTGCTGGTGGCGAGAGATGCATTTCTTCGGCGTCTACGATGGACATGGAGGCCATCGCGTGGCGAAACTATGTAAGGAGAAGATGCACGTGTTAGTACATGAAGAATTGGTGCGCGTTGTTGGCAAGCTCGAGATGGCTGAGAGTGGCGGTGGAGGAAGCAGGACGATGGAGGAAGAGGCGACTTGGATTAGAGTGATGCGGCGTAGCTTTGAGAGAATGGACGAAGTGGCACTCACTACTTGTGCCTGTGGGCGCGTCACAGGCCGTTGTGAGTGCCATCCCTTGTCGGTGGCTCTCTGTGGCTCCACTGCCGTCTTCGCCGCCCTCACACCGGATCACATAATTGTCGCCAACTGCGGCGACTCACGGGCCGTCCTTTGCCGAGGAGGAAGAACAATTCCGCTTTCCAATGATCACAAGCCTGATAGAATTGATGAACTAAAAAGGATCGAAGCTGCTGGAGGACGGGTGATTTTCGTTAATGGAGCTCGGGTTGAAGGCATCCTTGCAATGTCCCGTGCAATAGGTGACAAGTATCTGAAGTCAGTTGTAGTATCTGAGCCTGAAATTACTTTCACCAAAAGAGAATCAGATGATGAATGTTTAATACTTGCAAGTGATGGTTTGTGGGATGTTCTTTCAAGTGAGATGGCTTGTGAGGTAACTCGTGAATGTCTCTATGAAGGAACGATCACTGCTGCTACTATTGCTTCAATAGACCTCAATGCGGTGCCTCAAATTGAAGAAGAAGGGGCTGGAACTTTATATCTGTCTCGAACTGCAAGGGCGGCTGCTCTGCTTACTCGTCTTGCTTTGGCGCGGAAAAGCAGGGACAATATTAGTGTTATTGTTGTTGATTTAAAGAGGACCTGA 1329 49.06 MISMEVYRRMLEDDAAKCRERRMISLEVYRRMLSVEVDAAKCRERRHRRIVMRRLATIPSTKANSPSPSSSHNRKENQTKSFGLEKKHVWKMDGKGAPKISSSLSKEDVKTVDVVPSPLVFQPQFGTMSVCGRSRKMEDAISASTCLFGPKNCWWREMHFFGVYDGHGGHRVAKLCKEKMHVLVHEELVRVVGKLEMAESGGGGSRTMEEEATWIRVMRRSFERMDEVALTTCACGRVTGRCECHPLSVALCGSTAVFAALTPDHIIVANCGDSRAVLCRGGRTIPLSNDHKPDRIDELKRIEAAGGRVIFVNGARVEGILAMSRAIGDKYLKSVVVSEPEITFTKRESDDECLILASDGLWDVLSSEMACEVTRECLYEGTITAATIASIDLNAVPQIEEEGAGTLYLSRTARAAALLTRLALARKSRDNISVIVVDLKRT 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2014750 2028116 - Hsped.07g02100.1 Hepe07g0210 573605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0210 442 Gene3D - 119 442 IPR036457 -
Hepe07g0210 442 SMART PP2C_4 114 437 IPR001932 -
Hepe07g0210 442 SUPERFAMILY PP2C-like 117 440 IPR036457 -
Hepe07g0210 442 MobiDBLite consensus disorder prediction 53 84 - -
Hepe07g0210 442 PANTHER PROTEIN PHOSPHATASE 79 438 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe07g0210 442 Pfam Protein phosphatase 2C 126 431 IPR001932 -
Hepe07g0210 442 CDD PP2Cc 125 439 IPR001932 -
Hepe07g0210 442 ProSiteProfiles PPM-type phosphatase domain profile. 124 439 IPR001932 -
Hepe07g0210 442 ProSitePatterns PPM-type phosphatase domain signature. 160 168 IPR000222 GO:0043169(InterPro)
Hepe07g0210 442 MobiDBLite consensus disorder prediction 58 77 - -
Hepe07g0210 442 FunFam Protein phosphatase 2C 50 122 442 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0077 Hepe-Chr7:740930 Hepe07g0210 Hepe-Chr7:2014750 1.24e-74 dispersed
Hepe07g0210 Hepe-Chr7:2014750 Hepe08g1407 Hepe-Chr8:16615057 1.76e-70 dispersed
Hepe07g0210 Hepe-Chr7:2014750 Hepe02g3358 Hepe-Chr2:83144466 1.83e-73 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0210 K14497 - csv:101206634 524.628